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The map label for this gene is pepF [H]

Identifier: 21909965

GI number: 21909965

Start: 467681

End: 469480

Strand: Reverse

Name: pepF [H]

Synonym: SpyM3_0429

Alternate gene names: 21909965

Gene position: 469480-467681 (Counterclockwise)

Preceding gene: 21909970

Following gene: 21909964

Centisome position: 24.7

GC content: 41.78

Gene sequence:

>1800_bases
ATGGAATTGAAAAAACGTTCAGAATTCCCTGGAAATGAACTTTGGGATCTAACAGCGCTCTACAAAGACCGCCAAGATTT
TTTACTCGCTATTGAAAAAGCCTTACAAGATATTGACCTGTTTAAGCGCAATTATGAAGGCCGCTTAACGTCGGTGGACG
ATTTCACTCAGGCCTTAATAGAAATTGAGCATATTTATATTCAAATGAGTCATATTGGCACTTATGCCTTTATGCCTCAA
ACCACTGACTTTTCAGATGAAAGTTTTGCTCAAATTGCTCAGGCTGGCGATGATTTCATGACTAAAGCTAGCGTTGCCCT
TAGCTTCTTTGACACCGCCTTAGCCAATGCCGACCTTGACGTGTTAGATACATTAGAAAAGAACCCTTATTTCAGCGCAG
CTATTCGCATGGCAAAAATCCAAAAAGAACACCTCTTAAGTCCTGATGTGGAAAAGGCTTTGGCTAACTTACGCGAGGTT
ATCAATGCGCCCTATGATATTTACACCAAAATGCGGGCTGGTGACTTTGACATGGATGATTTTGAGGTGGATGGTAAAAC
CTATAAAAATAGCTTTGTTTCTTACGAAAATTTCTATCAAAATCACGAAAATGCTGAGATTCGTGAAAAAGCCTTCCGCT
CTTTTTCAAAAGGTCTCCGTAAACACCAAAATACAGCTGCAGCGGCTTACTTAGCCAAGGTTAAATCTGAAAAATTGTTA
GCTGATATGAAAGGCTACGCTTCTGTCTTTGATTACCTCCTAGCTGAACAGGAAGTGGATCGTAGCTTGTTCGACCGCCA
AATTGACCTCATCATGACTGAATTTGGACCGGTTGCTCAGAAATTCTTAAAACATGTCGCCCAAGTCAATGGTCTTGAGA
AAATGACTTTTGCTGACTGGAAACTAGATATTGATAATGAGCTCAATCCAGAGGTCAGCATTGATGGCGCTTATGACCTC
GTGATGAAATCTCTAGCCCCATTAGGACAAGAATACACGAAAGAAATCGAACGTTATCAGACAGAACGCTGGGTTGACTT
TGCTGCTAATGCCAATAAAGATTCTGGTGGTTATGCCGCTGATCCCTACAAGGTTCATCCGTATGTCTTAATGAGTTGGA
CTGGAAGAATGTCTGATGTTTATACCCTTATTCATGAAATCGGTCACTCTGGTCAATTTATTTTCTCTGATAATCACCAA
AGTTACTTCAACACCCATATGTCAACTTATTACGTCGAAGCGCCATCGACCTTTAATGAATTGATGCTTAGTGATTACTT
GGAACATCAGTTTGATGACCCTCGTCAAAAACGTTTTGCTCTTGCTCACCGTTTAACAGATACTTACTTTCATAACTTCA
TCACTCACCTATTGGAAGCGGCTTTCCAACGTAAGGTTTACACCCTGATTGAAGAAGGCGGTACCTTTGGAGCTGACCAA
TTAAATGCGATGATGAAAGAGGTCTTAACAGACTTCTGGGGAGATGCCGTTGACATCGACGATGACGCAGCTCTTACCTG
GATGCGCCAAGCGCATTACTACATGGGCTTATATAGTTATACCTATTCTGCTGGGCTTGTTATGTCAACAGCTGGTTACC
TCAACCTTAAACATAATCCAAATGGCGCCAAGGAGTGGCTTGACTTCCTAAAATCAGGTGGCAGCCGTACGCCTCTTGAT
ACTGCAATGCTCATTGGGGCAGACATTGCTACTGAAAAACCTCTTCGAGATACCATTCAATTCTTGAGTGAGACCGTTGA
CCAAATTATCAGTTACACCGAGGATATGTCACATGCCTAA

Upstream 100 bases:

>100_bases
GTAAGCGCTTTATTTTAAAGAATGTTTGGATAGGTTTAGTCTCCATATTCCACTAAAATTCTGTTATACTAGTCTTGACT
ATATTGTTAAGGAGACAACT

Downstream 100 bases:

>100_bases
TCTCTATGATTTTACGGTTAAGGCTCAGGACGGCAGTGACATCTCACTAGTTAACTACAAAGAAAAAGTGGTTTTGGTCG
TGAATACAGCTACCAAATGT

Product: putative oligoendopeptidase F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 599; Mature: 599

Protein sequence:

>599_residues
MELKKRSEFPGNELWDLTALYKDRQDFLLAIEKALQDIDLFKRNYEGRLTSVDDFTQALIEIEHIYIQMSHIGTYAFMPQ
TTDFSDESFAQIAQAGDDFMTKASVALSFFDTALANADLDVLDTLEKNPYFSAAIRMAKIQKEHLLSPDVEKALANLREV
INAPYDIYTKMRAGDFDMDDFEVDGKTYKNSFVSYENFYQNHENAEIREKAFRSFSKGLRKHQNTAAAAYLAKVKSEKLL
ADMKGYASVFDYLLAEQEVDRSLFDRQIDLIMTEFGPVAQKFLKHVAQVNGLEKMTFADWKLDIDNELNPEVSIDGAYDL
VMKSLAPLGQEYTKEIERYQTERWVDFAANANKDSGGYAADPYKVHPYVLMSWTGRMSDVYTLIHEIGHSGQFIFSDNHQ
SYFNTHMSTYYVEAPSTFNELMLSDYLEHQFDDPRQKRFALAHRLTDTYFHNFITHLLEAAFQRKVYTLIEEGGTFGADQ
LNAMMKEVLTDFWGDAVDIDDDAALTWMRQAHYYMGLYSYTYSAGLVMSTAGYLNLKHNPNGAKEWLDFLKSGGSRTPLD
TAMLIGADIATEKPLRDTIQFLSETVDQIISYTEDMSHA

Sequences:

>Translated_599_residues
MELKKRSEFPGNELWDLTALYKDRQDFLLAIEKALQDIDLFKRNYEGRLTSVDDFTQALIEIEHIYIQMSHIGTYAFMPQ
TTDFSDESFAQIAQAGDDFMTKASVALSFFDTALANADLDVLDTLEKNPYFSAAIRMAKIQKEHLLSPDVEKALANLREV
INAPYDIYTKMRAGDFDMDDFEVDGKTYKNSFVSYENFYQNHENAEIREKAFRSFSKGLRKHQNTAAAAYLAKVKSEKLL
ADMKGYASVFDYLLAEQEVDRSLFDRQIDLIMTEFGPVAQKFLKHVAQVNGLEKMTFADWKLDIDNELNPEVSIDGAYDL
VMKSLAPLGQEYTKEIERYQTERWVDFAANANKDSGGYAADPYKVHPYVLMSWTGRMSDVYTLIHEIGHSGQFIFSDNHQ
SYFNTHMSTYYVEAPSTFNELMLSDYLEHQFDDPRQKRFALAHRLTDTYFHNFITHLLEAAFQRKVYTLIEEGGTFGADQ
LNAMMKEVLTDFWGDAVDIDDDAALTWMRQAHYYMGLYSYTYSAGLVMSTAGYLNLKHNPNGAKEWLDFLKSGGSRTPLD
TAMLIGADIATEKPLRDTIQFLSETVDQIISYTEDMSHA
>Mature_599_residues
MELKKRSEFPGNELWDLTALYKDRQDFLLAIEKALQDIDLFKRNYEGRLTSVDDFTQALIEIEHIYIQMSHIGTYAFMPQ
TTDFSDESFAQIAQAGDDFMTKASVALSFFDTALANADLDVLDTLEKNPYFSAAIRMAKIQKEHLLSPDVEKALANLREV
INAPYDIYTKMRAGDFDMDDFEVDGKTYKNSFVSYENFYQNHENAEIREKAFRSFSKGLRKHQNTAAAAYLAKVKSEKLL
ADMKGYASVFDYLLAEQEVDRSLFDRQIDLIMTEFGPVAQKFLKHVAQVNGLEKMTFADWKLDIDNELNPEVSIDGAYDL
VMKSLAPLGQEYTKEIERYQTERWVDFAANANKDSGGYAADPYKVHPYVLMSWTGRMSDVYTLIHEIGHSGQFIFSDNHQ
SYFNTHMSTYYVEAPSTFNELMLSDYLEHQFDDPRQKRFALAHRLTDTYFHNFITHLLEAAFQRKVYTLIEEGGTFGADQ
LNAMMKEVLTDFWGDAVDIDDDAALTWMRQAHYYMGLYSYTYSAGLVMSTAGYLNLKHNPNGAKEWLDFLKSGGSRTPLD
TAMLIGADIATEKPLRDTIQFLSETVDQIISYTEDMSHA

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 68678; Mature: 68678

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELKKRSEFPGNELWDLTALYKDRQDFLLAIEKALQDIDLFKRNYEGRLTSVDDFTQALI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
EIEHIYIQMSHIGTYAFMPQTTDFSDESFAQIAQAGDDFMTKASVALSFFDTALANADLD
HHHHHEEEHHHCCCEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHH
VLDTLEKNPYFSAAIRMAKIQKEHLLSPDVEKALANLREVINAPYDIYTKMRAGDFDMDD
HHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCC
FEVDGKTYKNSFVSYENFYQNHENAEIREKAFRSFSKGLRKHQNTAAAAYLAKVKSEKLL
EECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADMKGYASVFDYLLAEQEVDRSLFDRQIDLIMTEFGPVAQKFLKHVAQVNGLEKMTFADW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEECE
KLDIDNELNPEVSIDGAYDLVMKSLAPLGQEYTKEIERYQTERWVDFAANANKDSGGYAA
EEECCCCCCCCEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DPYKVHPYVLMSWTGRMSDVYTLIHEIGHSGQFIFSDNHQSYFNTHMSTYYVEAPSTFNE
CCEEECCEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHCCEEEEEECCCHHHH
LMLSDYLEHQFDDPRQKRFALAHRLTDTYFHNFITHLLEAAFQRKVYTLIEEGGTFGADQ
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LNAMMKEVLTDFWGDAVDIDDDAALTWMRQAHYYMGLYSYTYSAGLVMSTAGYLNLKHNP
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCEEEEECCC
NGAKEWLDFLKSGGSRTPLDTAMLIGADIATEKPLRDTIQFLSETVDQIISYTEDMSHA
CHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MELKKRSEFPGNELWDLTALYKDRQDFLLAIEKALQDIDLFKRNYEGRLTSVDDFTQALI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
EIEHIYIQMSHIGTYAFMPQTTDFSDESFAQIAQAGDDFMTKASVALSFFDTALANADLD
HHHHHEEEHHHCCCEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHH
VLDTLEKNPYFSAAIRMAKIQKEHLLSPDVEKALANLREVINAPYDIYTKMRAGDFDMDD
HHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCC
FEVDGKTYKNSFVSYENFYQNHENAEIREKAFRSFSKGLRKHQNTAAAAYLAKVKSEKLL
EECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADMKGYASVFDYLLAEQEVDRSLFDRQIDLIMTEFGPVAQKFLKHVAQVNGLEKMTFADW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEECE
KLDIDNELNPEVSIDGAYDLVMKSLAPLGQEYTKEIERYQTERWVDFAANANKDSGGYAA
EEECCCCCCCCEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DPYKVHPYVLMSWTGRMSDVYTLIHEIGHSGQFIFSDNHQSYFNTHMSTYYVEAPSTFNE
CCEEECCEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHCCEEEEEECCCHHHH
LMLSDYLEHQFDDPRQKRFALAHRLTDTYFHNFITHLLEAAFQRKVYTLIEEGGTFGADQ
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LNAMMKEVLTDFWGDAVDIDDDAALTWMRQAHYYMGLYSYTYSAGLVMSTAGYLNLKHNP
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCEEEEECCC
NGAKEWLDFLKSGGSRTPLDTAMLIGADIATEKPLRDTIQFLSETVDQIISYTEDMSHA
CHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]