| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is yehU [H]
Identifier: 218930939
GI number: 218930939
Start: 4433077
End: 4434774
Strand: Direct
Name: yehU [H]
Synonym: YPO3943
Alternate gene names: 218930939
Gene position: 4433077-4434774 (Clockwise)
Preceding gene: 218930933
Following gene: 218930941
Centisome position: 95.26
GC content: 48.41
Gene sequence:
>1698_bases ATGGGCATTAGCCAAACAGAACTGATCTTTTCCCTTTTACAACAGATGTGTGTGTATTTGGTTATTGCCTATCTGCTGAG TAAAACACCGCTTTTTATCCCCTTGATGCAAGTTACTATCAGGTTGCCCCATAAACTGGTGTGCTATCTCACCTTTTCCA TGTTTTGCATTATGGGCACCTACTTTGGTCTTAACATTGATGATTCTATCGCGAATACTCGTGCTATCGGCGCAGTCTTG GGTGGAATGCTAGGGGGGCCATCGGTCGGGTTTCTGGTAGGGCTAACCGGAGGCCTGCATCGTTATTCAATGGGGGGGAT GACCGCAACCGCCTGTATGTTATCAACCATTGCTGAAGGGTTATTGGGCGGCCTTCTCCACCTTTATCTGACACGTAAAA ACCGCCTCGATTTATTGTTTCAGCCACTGGTGGTCGCGGGCATTACACTGGTAGCCGAAGTGCTACAAATGATGATTATT CTGGCCGTCGCCCGCCCCTTCAATGAAGCGGTCGAATTGGTTGAAAATATTGCCTTGCCGATGATGATCACCAATACCAT TGGTGCCGCCATGTTTATGCGTATCTTATTAGACCGCCGGGCCATTTTCGAAAAATACACCACGGCATTTTCTGCCAAGG CGCTACAAATTGCTGCACGGGCGGAGGGGCTACTGCGCCATGGCTTTGACCAGCAGAACAGTATGCGGGTGGCGCGTATC TTGTATGAGGAGTTGGGTGTGGGCGCAGTAGCCATTACTGATCGCGAAAAATTACTGGCCTTTATCGGTAGCGGTGCCGA CCACCATCAGGTGGGCAGTGCTATTACCTCCAGCCATACCCACCGCGCGATTGAACTCAATCAGGTGGTGTATGCCGACG GCAATGCCGTGCCTTATACCTGCTCAATTTCACCCACCTGTAAGCTGGGTTCAACACTGGTTATCCCTTTGCGAGGTGAA GAGCACCGGGTGATCGGCAGTATCAAATTGTATGAGCCAAAAAGTAAATTATTCTCCAGCATTAACCGCACCTTAGGAGA GGGTATTGCGCACTTATTGTCAGCACAGATTTTGGCGGGAGAATTCGAACAACAAAAACAATTACTGGCGCAATCTGAAA TCAAACTGCTCCATGCACAGGTCAACCCACATTTCTTGTTTAATGCGCTCAATACCCTATCAGTGGTGATCCGCCGTAAT CCAGATCATGCCCGCAATTTGGTGCTTTCTTTATCAACCTTTTTCCGTAAAAACCTAAAACGCAGCCATGACGTGGTCAC GTTAAGTGATGAGATTGAACATGTGAATGCGTATCTTGAAATAGAAAAGGCACGCTTTGCTGATCGTCTGACCGTCACGG TTTCACTACCGAATGAACTGATGGAGGCGCACTTACCCGCGTTCTCCCTGCAACCCGTGGTAGAAAATGCAATCAAACAT GGTATCTCACAGATGTTCAGTAACGGACGGGTCACGTTGCGCGGTAAATTGGATGACAACACGTTGGTATTGGAAGTCGA AGATAACGCCGGTTTATATCAGCCGCAGCCGGATGGCGATGGTCTGGGAATGAGTTTGGTTGATCGGCGGATTAAAGCGC GCTATGGCAAGGAATATGGCATCACCGTCGTCAGTAACGCGGAAGTATTTACCCGTATTATTATTAAGTTACCGTTTATT ACCGTGAGCGAGCAGTAA
Upstream 100 bases:
>100_bases GGTGATTAACGTCTCTGGCGCAAAATACGGATACAATAGCGGCAGAAATAACGCTACCCAGAATCACTCCCTCCCAACGT CATAACAGTGGTCATCCAAC
Downstream 100 bases:
>100_bases GACGGTTTCATTTCGAGAGACGATCTCGTCAAAGGCGGCATATCTTTTGACGATTAGAAAACCCTATAAAAATTAATGCC AGAGTATAACCCACCTCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 565; Mature: 564
Protein sequence:
>565_residues MGISQTELIFSLLQQMCVYLVIAYLLSKTPLFIPLMQVTIRLPHKLVCYLTFSMFCIMGTYFGLNIDDSIANTRAIGAVL GGMLGGPSVGFLVGLTGGLHRYSMGGMTATACMLSTIAEGLLGGLLHLYLTRKNRLDLLFQPLVVAGITLVAEVLQMMII LAVARPFNEAVELVENIALPMMITNTIGAAMFMRILLDRRAIFEKYTTAFSAKALQIAARAEGLLRHGFDQQNSMRVARI LYEELGVGAVAITDREKLLAFIGSGADHHQVGSAITSSHTHRAIELNQVVYADGNAVPYTCSISPTCKLGSTLVIPLRGE EHRVIGSIKLYEPKSKLFSSINRTLGEGIAHLLSAQILAGEFEQQKQLLAQSEIKLLHAQVNPHFLFNALNTLSVVIRRN PDHARNLVLSLSTFFRKNLKRSHDVVTLSDEIEHVNAYLEIEKARFADRLTVTVSLPNELMEAHLPAFSLQPVVENAIKH GISQMFSNGRVTLRGKLDDNTLVLEVEDNAGLYQPQPDGDGLGMSLVDRRIKARYGKEYGITVVSNAEVFTRIIIKLPFI TVSEQ
Sequences:
>Translated_565_residues MGISQTELIFSLLQQMCVYLVIAYLLSKTPLFIPLMQVTIRLPHKLVCYLTFSMFCIMGTYFGLNIDDSIANTRAIGAVL GGMLGGPSVGFLVGLTGGLHRYSMGGMTATACMLSTIAEGLLGGLLHLYLTRKNRLDLLFQPLVVAGITLVAEVLQMMII LAVARPFNEAVELVENIALPMMITNTIGAAMFMRILLDRRAIFEKYTTAFSAKALQIAARAEGLLRHGFDQQNSMRVARI LYEELGVGAVAITDREKLLAFIGSGADHHQVGSAITSSHTHRAIELNQVVYADGNAVPYTCSISPTCKLGSTLVIPLRGE EHRVIGSIKLYEPKSKLFSSINRTLGEGIAHLLSAQILAGEFEQQKQLLAQSEIKLLHAQVNPHFLFNALNTLSVVIRRN PDHARNLVLSLSTFFRKNLKRSHDVVTLSDEIEHVNAYLEIEKARFADRLTVTVSLPNELMEAHLPAFSLQPVVENAIKH GISQMFSNGRVTLRGKLDDNTLVLEVEDNAGLYQPQPDGDGLGMSLVDRRIKARYGKEYGITVVSNAEVFTRIIIKLPFI TVSEQ >Mature_564_residues GISQTELIFSLLQQMCVYLVIAYLLSKTPLFIPLMQVTIRLPHKLVCYLTFSMFCIMGTYFGLNIDDSIANTRAIGAVLG GMLGGPSVGFLVGLTGGLHRYSMGGMTATACMLSTIAEGLLGGLLHLYLTRKNRLDLLFQPLVVAGITLVAEVLQMMIIL AVARPFNEAVELVENIALPMMITNTIGAAMFMRILLDRRAIFEKYTTAFSAKALQIAARAEGLLRHGFDQQNSMRVARIL YEELGVGAVAITDREKLLAFIGSGADHHQVGSAITSSHTHRAIELNQVVYADGNAVPYTCSISPTCKLGSTLVIPLRGEE HRVIGSIKLYEPKSKLFSSINRTLGEGIAHLLSAQILAGEFEQQKQLLAQSEIKLLHAQVNPHFLFNALNTLSVVIRRNP DHARNLVLSLSTFFRKNLKRSHDVVTLSDEIEHVNAYLEIEKARFADRLTVTVSLPNELMEAHLPAFSLQPVVENAIKHG ISQMFSNGRVTLRGKLDDNTLVLEVEDNAGLYQPQPDGDGLGMSLVDRRIKARYGKEYGITVVSNAEVFTRIIIKLPFIT VSEQ
Specific function: Unknown
COG id: COG3275
COG function: function code T; Putative regulator of cell autolysis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788446, Length=552, Percent_Identity=67.7536231884058, Blast_Score=766, Evalue=0.0, Organism=Escherichia coli, GI1788723, Length=545, Percent_Identity=28.9908256880734, Blast_Score=243, Evalue=3e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003018 - InterPro: IPR010559 - InterPro: IPR011620 [H]
Pfam domain/function: PF07694 5TM-5TMR_LYT; PF02518 HATPase_c; PF06580 His_kinase [H]
EC number: NA
Molecular weight: Translated: 62187; Mature: 62056
Theoretical pI: Translated: 8.16; Mature: 8.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGISQTELIFSLLQQMCVYLVIAYLLSKTPLFIPLMQVTIRLPHKLVCYLTFSMFCIMGT CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH YFGLNIDDSIANTRAIGAVLGGMLGGPSVGFLVGLTGGLHRYSMGGMTATACMLSTIAEG HCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHEEECCCCHHHHCCCCHHHHHHHHHHHHHH LLGGLLHLYLTRKNRLDLLFQPLVVAGITLVAEVLQMMIILAVARPFNEAVELVENIALP HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCH MMITNTIGAAMFMRILLDRRAIFEKYTTAFSAKALQIAARAEGLLRHGFDQQNSMRVARI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH LYEELGVGAVAITDREKLLAFIGSGADHHQVGSAITSSHTHRAIELNQVVYADGNAVPYT HHHHHCCCEEEECCHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEECEEEEECCCCCEEE CSISPTCKLGSTLVIPLRGEEHRVIGSIKLYEPKSKLFSSINRTLGEGIAHLLSAQILAG ECCCCCCCCCCEEEEEECCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH EFEQQKQLLAQSEIKLLHAQVNPHFLFNALNTLSVVIRRNPDHARNLVLSLSTFFRKNLK HHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHC RSHDVVTLSDEIEHVNAYLEIEKARFADRLTVTVSLPNELMEAHLPAFSLQPVVENAIKH CCCCEEEECHHHHHHHHHEEEHHHHCCCEEEEEEECCHHHHHHHCCCCCCCHHHHHHHHH GISQMFSNGRVTLRGKLDDNTLVLEVEDNAGLYQPQPDGDGLGMSLVDRRIKARYGKEYG HHHHHHCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC ITVVSNAEVFTRIIIKLPFITVSEQ EEEEECHHHHHHHHHHCCCEEECCC >Mature Secondary Structure GISQTELIFSLLQQMCVYLVIAYLLSKTPLFIPLMQVTIRLPHKLVCYLTFSMFCIMGT CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH YFGLNIDDSIANTRAIGAVLGGMLGGPSVGFLVGLTGGLHRYSMGGMTATACMLSTIAEG HCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHEEECCCCHHHHCCCCHHHHHHHHHHHHHH LLGGLLHLYLTRKNRLDLLFQPLVVAGITLVAEVLQMMIILAVARPFNEAVELVENIALP HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCH MMITNTIGAAMFMRILLDRRAIFEKYTTAFSAKALQIAARAEGLLRHGFDQQNSMRVARI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH LYEELGVGAVAITDREKLLAFIGSGADHHQVGSAITSSHTHRAIELNQVVYADGNAVPYT HHHHHCCCEEEECCHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEECEEEEECCCCCEEE CSISPTCKLGSTLVIPLRGEEHRVIGSIKLYEPKSKLFSSINRTLGEGIAHLLSAQILAG ECCCCCCCCCCEEEEEECCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH EFEQQKQLLAQSEIKLLHAQVNPHFLFNALNTLSVVIRRNPDHARNLVLSLSTFFRKNLK HHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHC RSHDVVTLSDEIEHVNAYLEIEKARFADRLTVTVSLPNELMEAHLPAFSLQPVVENAIKH CCCCEEEECHHHHHHHHHEEEHHHHCCCEEEEEEECCHHHHHHHCCCCCCCHHHHHHHHH GISQMFSNGRVTLRGKLDDNTLVLEVEDNAGLYQPQPDGDGLGMSLVDRRIKARYGKEYG HHHHHHCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC ITVVSNAEVFTRIIIKLPFITVSEQ EEEEECHHHHHHHHHHCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]