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The map label for this gene is 218930881

Identifier: 218930881

GI number: 218930881

Start: 4356547

End: 4357914

Strand: Direct

Name: 218930881

Synonym: YPO3880

Alternate gene names: NA

Gene position: 4356547-4357914 (Clockwise)

Preceding gene: 218930880

Following gene: 218930882

Centisome position: 93.61

GC content: 49.34

Gene sequence:

>1368_bases
ATGTTAAGACCAACAAAGCCATTAATATCTTCCGGCATTTCGCAGTCTACCACTGCGGTCTATTGCCGCCGCCCATATTT
TCTTGCTGGGATGACATTACTGATTGGGTTATTTAGCACCTCCGCATGGTCAAACTGCACCCGTATTACCGCACAAAATC
AGATAAGTTCCAGTGATGGTACCGCCGCTTCATGGTTGGGTTCCAGAGACGATAATAATGGTTCGCTCAACTTACCCAGT
ATTGTTGATCTCAGCACCAATGCGAATTTTCAGCCCGATGGCACGTTACTGGCATCAGCAACCTCAGACTTTACGACCTT
TGCAGTGAATACCGGTTATGCCCTTGACCAGGTCCTCTTTCGCTGTGATGCGGCTGATGTGGATCAGCTCTATGAGATGT
ATGCCACTAACGGTGACAGCACTTATGGTGGCAGATATGAAGACGGCACGATTGCAGGCAATGTGTCCTATGGCTATGCT
ACTACAGTGATGAATGTGGTTATTCGGTTTACCAACCTGGCAACGGGGGAGTATTACGCTCGTATTTGGAAAGGCCGACG
CTTAACCGGGCTTGATACTGACAGTAGCGGACGGATTTTAGTTAAAGCGAAAAATTTCAGTAATGTGTATACCGAGCTAT
TTCGTATTGATTATGCCCGTAGTGGCGCTAACAATACGCCATCTTATCTCTATGGACGTAGTCAGCCCAATGCCTATATC
GCGTTTAAAGGGCCAGGAATTACTGGCCCGATTGAGGGTACTGACTCGTACTCAAACTGGCCCGGTTGGTATTCTACCTG
GCCTGCATCACTTGGTTTGTACAAATACGTCACATTCCGCCGGACCACTATTTGTGCGGTAAGCAACTTTACCCCGACGG
TCGTGTTACCCAGGATTTCGGTGGCAGAACTGAATAATGGGAATACCAGCTCTGCTGATTTTAATGTGGATTTTCAGTGC
CAGACCGGAATTAACTCTGGCGTGACGGCTGGCACAGTGGCGATGGGATTTTTAGTGCCGGCGGCCAATGCAGCCAAAGC
TCAGGCGCTGGGGTTAATGAACGGCAACGGGGGAGTAAGCCATTTGGTCTCCGATAACTATGGCGCTGCTGGCACCGCGG
GCGGGGTGGGTATTCGCATCTACCGTAACAATAGCCCGATGTATCTACTGTCAAAAAACGTAACTCAGACAGGTAACAAT
GGGGGGTGGTATGGTATCTTACAGGGCGCACAAGAAACCACAGGCAGCGTAGATGGGGGGAACAGTTACACCGAAACTTT
CCGTGCTGAGTTAAGCAAAATAAGCGGGCAAACAGTGACCGCCGGAGCAGTGAATGCACATGCGCAAGTGGTTATCCGTG
TCCAATAA

Upstream 100 bases:

>100_bases
GATCAGTGTCAATTACCTTATGCTTTTAATCGCCAGGATACCGAGCAAGATATCATTCATATAACCGCGAGTTGCCGCCG
CTAACCCTATGAGAAAAATA

Downstream 100 bases:

>100_bases
TATAATGCTTAGCCGTATCAACCGTAGGCTCCGTGGGTTGCTGCTACTCATGACCACCTGTCGTGTACTGACTCTCCCTG
CGCTGACGATTGGCGTGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: Adhesin MrkD; Fimbrial Subunit Outer Membrane Protein; Fimbriae; Fimbrial Adhesin; Fimbrial Protein Domain-Containing Protein; Fimbrial Protein; Fimbriae Usher Protein

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MLRPTKPLISSGISQSTTAVYCRRPYFLAGMTLLIGLFSTSAWSNCTRITAQNQISSSDGTAASWLGSRDDNNGSLNLPS
IVDLSTNANFQPDGTLLASATSDFTTFAVNTGYALDQVLFRCDAADVDQLYEMYATNGDSTYGGRYEDGTIAGNVSYGYA
TTVMNVVIRFTNLATGEYYARIWKGRRLTGLDTDSSGRILVKAKNFSNVYTELFRIDYARSGANNTPSYLYGRSQPNAYI
AFKGPGITGPIEGTDSYSNWPGWYSTWPASLGLYKYVTFRRTTICAVSNFTPTVVLPRISVAELNNGNTSSADFNVDFQC
QTGINSGVTAGTVAMGFLVPAANAAKAQALGLMNGNGGVSHLVSDNYGAAGTAGGVGIRIYRNNSPMYLLSKNVTQTGNN
GGWYGILQGAQETTGSVDGGNSYTETFRAELSKISGQTVTAGAVNAHAQVVIRVQ

Sequences:

>Translated_455_residues
MLRPTKPLISSGISQSTTAVYCRRPYFLAGMTLLIGLFSTSAWSNCTRITAQNQISSSDGTAASWLGSRDDNNGSLNLPS
IVDLSTNANFQPDGTLLASATSDFTTFAVNTGYALDQVLFRCDAADVDQLYEMYATNGDSTYGGRYEDGTIAGNVSYGYA
TTVMNVVIRFTNLATGEYYARIWKGRRLTGLDTDSSGRILVKAKNFSNVYTELFRIDYARSGANNTPSYLYGRSQPNAYI
AFKGPGITGPIEGTDSYSNWPGWYSTWPASLGLYKYVTFRRTTICAVSNFTPTVVLPRISVAELNNGNTSSADFNVDFQC
QTGINSGVTAGTVAMGFLVPAANAAKAQALGLMNGNGGVSHLVSDNYGAAGTAGGVGIRIYRNNSPMYLLSKNVTQTGNN
GGWYGILQGAQETTGSVDGGNSYTETFRAELSKISGQTVTAGAVNAHAQVVIRVQ
>Mature_455_residues
MLRPTKPLISSGISQSTTAVYCRRPYFLAGMTLLIGLFSTSAWSNCTRITAQNQISSSDGTAASWLGSRDDNNGSLNLPS
IVDLSTNANFQPDGTLLASATSDFTTFAVNTGYALDQVLFRCDAADVDQLYEMYATNGDSTYGGRYEDGTIAGNVSYGYA
TTVMNVVIRFTNLATGEYYARIWKGRRLTGLDTDSSGRILVKAKNFSNVYTELFRIDYARSGANNTPSYLYGRSQPNAYI
AFKGPGITGPIEGTDSYSNWPGWYSTWPASLGLYKYVTFRRTTICAVSNFTPTVVLPRISVAELNNGNTSSADFNVDFQC
QTGINSGVTAGTVAMGFLVPAANAAKAQALGLMNGNGGVSHLVSDNYGAAGTAGGVGIRIYRNNSPMYLLSKNVTQTGNN
GGWYGILQGAQETTGSVDGGNSYTETFRAELSKISGQTVTAGAVNAHAQVVIRVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48504; Mature: 48504

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRPTKPLISSGISQSTTAVYCRRPYFLAGMTLLIGLFSTSAWSNCTRITAQNQISSSDG
CCCCCCHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCC
TAASWLGSRDDNNGSLNLPSIVDLSTNANFQPDGTLLASATSDFTTFAVNTGYALDQVLF
CHHHCCCCCCCCCCCEECCEEEEECCCCCCCCCCCEEEECCCCEEEEEEECCHHHHHHHH
RCDAADVDQLYEMYATNGDSTYGGRYEDGTIAGNVSYGYATTVMNVVIRFTNLATGEYYA
HCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCHHHH
RIWKGRRLTGLDTDSSGRILVKAKNFSNVYTELFRIDYARSGANNTPSYLYGRSQPNAYI
HHHCCCEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEE
AFKGPGITGPIEGTDSYSNWPGWYSTWPASLGLYKYVTFRRTTICAVSNFTPTVVLPRIS
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECEEEEEECCCCCEEEECCEE
VAELNNGNTSSADFNVDFQCQTGINSGVTAGTVAMGFLVPAANAAKAQALGLMNGNGGVS
EEECCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCHHEEEEECCCCCEE
HLVSDNYGAAGTAGGVGIRIYRNNSPMYLLSKNVTQTGNNGGWYGILQGAQETTGSVDGG
EEECCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCC
NSYTETFRAELSKISGQTVTAGAVNAHAQVVIRVQ
CHHHHHHHHHHHHCCCCEEEECEECCEEEEEEEEC
>Mature Secondary Structure
MLRPTKPLISSGISQSTTAVYCRRPYFLAGMTLLIGLFSTSAWSNCTRITAQNQISSSDG
CCCCCCHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCC
TAASWLGSRDDNNGSLNLPSIVDLSTNANFQPDGTLLASATSDFTTFAVNTGYALDQVLF
CHHHCCCCCCCCCCCEECCEEEEECCCCCCCCCCCEEEECCCCEEEEEEECCHHHHHHHH
RCDAADVDQLYEMYATNGDSTYGGRYEDGTIAGNVSYGYATTVMNVVIRFTNLATGEYYA
HCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCHHHH
RIWKGRRLTGLDTDSSGRILVKAKNFSNVYTELFRIDYARSGANNTPSYLYGRSQPNAYI
HHHCCCEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEE
AFKGPGITGPIEGTDSYSNWPGWYSTWPASLGLYKYVTFRRTTICAVSNFTPTVVLPRIS
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECEEEEEECCCCCEEEECCEE
VAELNNGNTSSADFNVDFQCQTGINSGVTAGTVAMGFLVPAANAAKAQALGLMNGNGGVS
EEECCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCHHEEEEECCCCCEE
HLVSDNYGAAGTAGGVGIRIYRNNSPMYLLSKNVTQTGNNGGWYGILQGAQETTGSVDGG
EEECCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCC
NSYTETFRAELSKISGQTVTAGAVNAHAQVVIRVQ
CHHHHHHHHHHHHCCCCEEEECEECCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA