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The map label for this gene is 218930842

Identifier: 218930842

GI number: 218930842

Start: 4307604

End: 4308821

Strand: Reverse

Name: 218930842

Synonym: YPO3839

Alternate gene names: NA

Gene position: 4308821-4307604 (Counterclockwise)

Preceding gene: 218930844

Following gene: 218930841

Centisome position: 92.59

GC content: 51.81

Gene sequence:

>1218_bases
ATGCCTCGTCATATTTATATTGCTACCACTACCGATACCAAAGGCCAGGAACTGGCGTATGTCAGTGAACTGATCCAGGC
AACCGGTCTGACAACAGTCACGGTTGATTTATCAACCAAAGAGAGCCAAAGGGATAGCGGTGCTGATATTTGCGCTGAAA
CGGTGGCGGGCTATCACCCCGATGGTCGTCAGGCGGTTTTTTGTGGTGATAGAGGGCAGGCCATTAATGCTATGGCTATC
GCTTTCGAGCGTTTTATGGTGAGCCGCGTTGATGTTGCCGCTTTACTTGGTATGGGCGGCTCTGGTGGTACAGCGCTGAT
CACCCCAGCGATGCAACGTTTACCCATCGGTATCCCTAAACTGATGGTGTCCACCATGGCTTCTGGTGATGTTTCCGGTT
ATATCGGGGCCAGTGATATCGCGATGATGTATTCTGTCACCGACATTGCCGGGCTTAACCGTATTTCCCGGCGGGTCCTC
AGTAACGCGGCTCACCAAGTTGCGGGGGCGGTTTATTTTGCTCAAGAAGCGTCTCCGGTTGATGACAAACCCGCGCTGGG
CCTGACTATGTTTGGGGTGACAACACCGTGTATTCAGGCGGTTAGCGCAGAATTATCGGATGAATATGACTGTTTGGTAT
TCCACGCCACGGGCAGCGGTGGCAAAGCGATGGAGAAATTGGCCGAAAGCGGTTTATTGGCTGGCGTGCTTGACCTGACC
ACCACAGAGGTTTGCGACCTGTTATTTGATGGCGTATTAGCCTGTGGGCCGGAACGGTTTGATGCGATAGCCCATACCCA
TATTCCCTACGTCGGTTCCTGTGGAGCACTGGATATGGTCAATTTTGGCAGCCCGGCCACCATCCCGGCTAAATATGCCG
ACCGCCTGTTCTATAAACATAATGCTCAGGTGACGCTGATGCGTACCACTGAGCAAGAAAACATTGAAATGGCCCGCTGG
ATTGGCGAGAAGTTAAACCGTTGTCAGGGTGAAGTGCGCTTTTTAATTCCGGAAGGGGGGTTCTCCGCATTGGATGCCCC
CGGTCAACCGTTCTGGGATGAAAAGGCGCTAACGGCCTTTATCCGCACACTGGAAGAAACGGTGATTCAAACCGATAAGC
GGCGCGTGGTCCATTATCCATTCAATATTAATGACCCGCTGTTTGCTCAGGCTGCCATCGAAAACTTTAAAGAAATTGTG
AATCGTCCTTCCCATTAG

Upstream 100 bases:

>100_bases
AAATGTCACCTAAAAAATAAGCCGTTATAAATAAGCATGTTGAAACCGATAGGTGGCAACAGGAAATGAGTCGCCACCAC
ATTCATAGAAGGATGTTCAG

Downstream 100 bases:

>100_bases
GGGCATTTTATTTATGGAGAAGCACATGCCTAAATTTCAACGTCAGGCCATATTGGCCAAGTTTCGGGAAATGATTGCCC
GCCGTGAACCTATTATTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MPRHIYIATTTDTKGQELAYVSELIQATGLTTVTVDLSTKESQRDSGADICAETVAGYHPDGRQAVFCGDRGQAINAMAI
AFERFMVSRVDVAALLGMGGSGGTALITPAMQRLPIGIPKLMVSTMASGDVSGYIGASDIAMMYSVTDIAGLNRISRRVL
SNAAHQVAGAVYFAQEASPVDDKPALGLTMFGVTTPCIQAVSAELSDEYDCLVFHATGSGGKAMEKLAESGLLAGVLDLT
TTEVCDLLFDGVLACGPERFDAIAHTHIPYVGSCGALDMVNFGSPATIPAKYADRLFYKHNAQVTLMRTTEQENIEMARW
IGEKLNRCQGEVRFLIPEGGFSALDAPGQPFWDEKALTAFIRTLEETVIQTDKRRVVHYPFNINDPLFAQAAIENFKEIV
NRPSH

Sequences:

>Translated_405_residues
MPRHIYIATTTDTKGQELAYVSELIQATGLTTVTVDLSTKESQRDSGADICAETVAGYHPDGRQAVFCGDRGQAINAMAI
AFERFMVSRVDVAALLGMGGSGGTALITPAMQRLPIGIPKLMVSTMASGDVSGYIGASDIAMMYSVTDIAGLNRISRRVL
SNAAHQVAGAVYFAQEASPVDDKPALGLTMFGVTTPCIQAVSAELSDEYDCLVFHATGSGGKAMEKLAESGLLAGVLDLT
TTEVCDLLFDGVLACGPERFDAIAHTHIPYVGSCGALDMVNFGSPATIPAKYADRLFYKHNAQVTLMRTTEQENIEMARW
IGEKLNRCQGEVRFLIPEGGFSALDAPGQPFWDEKALTAFIRTLEETVIQTDKRRVVHYPFNINDPLFAQAAIENFKEIV
NRPSH
>Mature_404_residues
PRHIYIATTTDTKGQELAYVSELIQATGLTTVTVDLSTKESQRDSGADICAETVAGYHPDGRQAVFCGDRGQAINAMAIA
FERFMVSRVDVAALLGMGGSGGTALITPAMQRLPIGIPKLMVSTMASGDVSGYIGASDIAMMYSVTDIAGLNRISRRVLS
NAAHQVAGAVYFAQEASPVDDKPALGLTMFGVTTPCIQAVSAELSDEYDCLVFHATGSGGKAMEKLAESGLLAGVLDLTT
TEVCDLLFDGVLACGPERFDAIAHTHIPYVGSCGALDMVNFGSPATIPAKYADRLFYKHNAQVTLMRTTEQENIEMARWI
GEKLNRCQGEVRFLIPEGGFSALDAPGQPFWDEKALTAFIRTLEETVIQTDKRRVVHYPFNINDPLFAQAAIENFKEIVN
RPSH

Specific function: Unknown

COG id: COG5441

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0261 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3839_YERPE (Q8ZAG3)

Other databases:

- EMBL:   AL590842
- EMBL:   AE009952
- EMBL:   AE017042
- PIR:   AG0467
- RefSeq:   NP_667729.1
- RefSeq:   NP_994500.1
- RefSeq:   YP_002348717.1
- ProteinModelPortal:   Q8ZAG3
- GeneID:   1145338
- GeneID:   1176674
- GeneID:   2765543
- GenomeReviews:   AE009952_GR
- GenomeReviews:   AE017042_GR
- GenomeReviews:   AL590842_GR
- KEGG:   ype:YPO3839
- KEGG:   ypk:y0391
- KEGG:   ypm:YP_3209
- HOGENOM:   HBG373911
- OMA:   PKVMVST
- ProtClustDB:   PRK02399
- BioCyc:   YPES187410:Y0391-MONOMER
- BioCyc:   YPES214092:YPO3839-MONOMER
- HAMAP:   MF_00677
- InterPro:   IPR008322
- PIRSF:   PIRSF033271

Pfam domain/function: PF06792 UPF0261

EC number: NA

Molecular weight: Translated: 43585; Mature: 43454

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRHIYIATTTDTKGQELAYVSELIQATGLTTVTVDLSTKESQRDSGADICAETVAGYHP
CCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCC
DGRQAVFCGDRGQAINAMAIAFERFMVSRVDVAALLGMGGSGGTALITPAMQRLPIGIPK
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHCCCCHHH
LMVSTMASGDVSGYIGASDIAMMYSVTDIAGLNRISRRVLSNAAHQVAGAVYFAQEASPV
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCC
DDKPALGLTMFGVTTPCIQAVSAELSDEYDCLVFHATGSGGKAMEKLAESGLLAGVLDLT
CCCCCCCEEEHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHH
TTEVCDLLFDGVLACGPERFDAIAHTHIPYVGSCGALDMVNFGSPATIPAKYADRLFYKH
HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEC
NAQVTLMRTTEQENIEMARWIGEKLNRCQGEVRFLIPEGGFSALDAPGQPFWDEKALTAF
CCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHH
IRTLEETVIQTDKRRVVHYPFNINDPLFAQAAIENFKEIVNRPSH
HHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PRHIYIATTTDTKGQELAYVSELIQATGLTTVTVDLSTKESQRDSGADICAETVAGYHP
CCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCC
DGRQAVFCGDRGQAINAMAIAFERFMVSRVDVAALLGMGGSGGTALITPAMQRLPIGIPK
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHCCCCHHH
LMVSTMASGDVSGYIGASDIAMMYSVTDIAGLNRISRRVLSNAAHQVAGAVYFAQEASPV
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCC
DDKPALGLTMFGVTTPCIQAVSAELSDEYDCLVFHATGSGGKAMEKLAESGLLAGVLDLT
CCCCCCCEEEHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHH
TTEVCDLLFDGVLACGPERFDAIAHTHIPYVGSCGALDMVNFGSPATIPAKYADRLFYKH
HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEC
NAQVTLMRTTEQENIEMARWIGEKLNRCQGEVRFLIPEGGFSALDAPGQPFWDEKALTAF
CCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHH
IRTLEETVIQTDKRRVVHYPFNINDPLFAQAAIENFKEIVNRPSH
HHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430