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The map label for this gene is 218930841

Identifier: 218930841

GI number: 218930841

Start: 4306748

End: 4307590

Strand: Reverse

Name: 218930841

Synonym: YPO3838

Alternate gene names: NA

Gene position: 4307590-4306748 (Counterclockwise)

Preceding gene: 218930842

Following gene: 218930840

Centisome position: 92.56

GC content: 50.77

Gene sequence:

>843_bases
ATGGAGAAGCACATGCCTAAATTTCAACGTCAGGCCATATTGGCCAAGTTTCGGGAAATGATTGCCCGCCGTGAACCTAT
TATTGGTGGCGGTGCGGGTACGGGGCTATCAGCCAAATGTGAAGAGGCCGGGGGAATTGATTTAATCGTTATTTATAACT
CAGGCCGCTATCGTATGGCTGGTCGTGGCTCATTGGCGGGGTTACTGGCGTACGGCAATGCCAATGACATTGTGGTTGAT
ATGGCAAAAGAAGTGCTGCCGGTGGTCAAGAATACCCCGGTTCTGGCCGGTGTTAATGGGACAGACCCCTTCTGCCAATT
TGATCACTTTTTGGACCATCTGAAAGCGCTTGGTTTTTCAGGCGTACAGAACTTCCCCACTGTGGGGTTAATCGACGGTA
ATTTCCGCGCTAACCTTGAAGAAACGGGCATGGGCTATGGGTTGGAAGTGGAAATGATCCGTTTGGCTCACCAAAAAGAT
TTACTGACCACGCCCTATGTCTTCAGTGCCGAAGATGCTATCGCGATGACACAAGCGGGTGCCGATATTATTGTGCCGCA
CATGGGGTTGACCACCGGGGGCAACATTGGTGCGGATACGGCACTGAAGCTGGCCGACTGCGTTCCTCTGATTAATGATT
GGGCAGCGGCAGCCAAAAGCGTCCGTGAAGAGGTGATTGTGCTGTGCCATGGCGGGCCAATCTCTACACCGGAAGATGCG
CAATACATTATGGATCATTGCCCACAATGTGATGGTTTCTACGGCGCTAGCTCAATGGAGCGTTTACCGACAGAAATTGC
CCTGACTGACACCACCCAAAAATTTAAAAATATAACGCGTTGA

Upstream 100 bases:

>100_bases
CATTATCCATTCAATATTAATGACCCGCTGTTTGCTCAGGCTGCCATCGAAAACTTTAAAGAAATTGTGAATCGTCCTTC
CCATTAGGGGCATTTTATTT

Downstream 100 bases:

>100_bases
TACTTTTTGCCAATACCAGTGGAAAGCCTGCTTTGTGAGTTTTGTCCGGTAATCGGCTAAATGAAGATGCAGGGTACGCA
AAACCGAAGTTGTTACTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MEKHMPKFQRQAILAKFREMIARREPIIGGGAGTGLSAKCEEAGGIDLIVIYNSGRYRMAGRGSLAGLLAYGNANDIVVD
MAKEVLPVVKNTPVLAGVNGTDPFCQFDHFLDHLKALGFSGVQNFPTVGLIDGNFRANLEETGMGYGLEVEMIRLAHQKD
LLTTPYVFSAEDAIAMTQAGADIIVPHMGLTTGGNIGADTALKLADCVPLINDWAAAAKSVREEVIVLCHGGPISTPEDA
QYIMDHCPQCDGFYGASSMERLPTEIALTDTTQKFKNITR

Sequences:

>Translated_280_residues
MEKHMPKFQRQAILAKFREMIARREPIIGGGAGTGLSAKCEEAGGIDLIVIYNSGRYRMAGRGSLAGLLAYGNANDIVVD
MAKEVLPVVKNTPVLAGVNGTDPFCQFDHFLDHLKALGFSGVQNFPTVGLIDGNFRANLEETGMGYGLEVEMIRLAHQKD
LLTTPYVFSAEDAIAMTQAGADIIVPHMGLTTGGNIGADTALKLADCVPLINDWAAAAKSVREEVIVLCHGGPISTPEDA
QYIMDHCPQCDGFYGASSMERLPTEIALTDTTQKFKNITR
>Mature_280_residues
MEKHMPKFQRQAILAKFREMIARREPIIGGGAGTGLSAKCEEAGGIDLIVIYNSGRYRMAGRGSLAGLLAYGNANDIVVD
MAKEVLPVVKNTPVLAGVNGTDPFCQFDHFLDHLKALGFSGVQNFPTVGLIDGNFRANLEETGMGYGLEVEMIRLAHQKD
LLTTPYVFSAEDAIAMTQAGADIIVPHMGLTTGGNIGADTALKLADCVPLINDWAAAAKSVREEVIVLCHGGPISTPEDA
QYIMDHCPQCDGFYGASSMERLPTEIALTDTTQKFKNITR

Specific function: Unknown

COG id: COG5564

COG function: function code R; Predicted TIM-barrel enzyme, possibly a dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR009215 [H]

Pfam domain/function: PF09370 TIM-br_sig_trns [H]

EC number: NA

Molecular weight: Translated: 30104; Mature: 30104

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKHMPKFQRQAILAKFREMIARREPIIGGGAGTGLSAKCEEAGGIDLIVIYNSGRYRMA
CCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHCCCCEEEEEEECCCEEEEC
GRGSLAGLLAYGNANDIVVDMAKEVLPVVKNTPVLAGVNGTDPFCQFDHFLDHLKALGFS
CCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCC
GVQNFPTVGLIDGNFRANLEETGMGYGLEVEMIRLAHQKDLLTTPYVFSAEDAIAMTQAG
CCCCCCEEEEECCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCHHHHHHCC
ADIIVPHMGLTTGGNIGADTALKLADCVPLINDWAAAAKSVREEVIVLCHGGPISTPEDA
CEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHH
QYIMDHCPQCDGFYGASSMERLPTEIALTDTTQKFKNITR
HHHHHHCCCCCCCCCCCHHHHCCCEEEECCCHHHHHCCCC
>Mature Secondary Structure
MEKHMPKFQRQAILAKFREMIARREPIIGGGAGTGLSAKCEEAGGIDLIVIYNSGRYRMA
CCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHCCCCEEEEEEECCCEEEEC
GRGSLAGLLAYGNANDIVVDMAKEVLPVVKNTPVLAGVNGTDPFCQFDHFLDHLKALGFS
CCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCC
GVQNFPTVGLIDGNFRANLEETGMGYGLEVEMIRLAHQKDLLTTPYVFSAEDAIAMTQAG
CCCCCCEEEEECCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCHHHHHHCC
ADIIVPHMGLTTGGNIGADTALKLADCVPLINDWAAAAKSVREEVIVLCHGGPISTPEDA
CEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHH
QYIMDHCPQCDGFYGASSMERLPTEIALTDTTQKFKNITR
HHHHHHCCCCCCCCCCCHHHHCCCEEEECCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]