Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is thiE [H]
Identifier: 218930745
GI number: 218930745
Start: 4192661
End: 4193308
Strand: Direct
Name: thiE [H]
Synonym: YPO3740
Alternate gene names: 218930745
Gene position: 4192661-4193308 (Clockwise)
Preceding gene: 218930744
Following gene: 218930746
Centisome position: 90.09
GC content: 53.4
Gene sequence:
>648_bases GTGGCTACACCAGGTTTCCCCTCCACGGAACAGCGTCTTGGGCTCTACCCAGTGGTGGACTCATTATTATGGATAGAACG CCTGCTGGCAGCCGGAGTCACGACGCTACAACTGCGCATTAAAAATGCAGACGATGCTCAGGTGGAGCAAGATATTGTCG CGGCCATTGAATTAGGAAAACGCTATCAGGCGCGCTTATTTATCAATGATTACTGGCAGTTGGCGGTTAAACACGGCGCT TATGGCGTTCATCTCGGTCAGGAAGATCTGGAAGCCGCTGATTTAGCGGCAATTCAGCAAGCGGGGTTGCGGCTCGGCAT TTCTACCCATGATGAACATGAGTTGGCGGTGGCAAAAACACTGCGCCCCTCTTATATCGCACTGGGGCATATTTTTCCCA CTCAGACCAAACAGATGCCGTCATCCCCACAGGGGTTGGCGTCGTTAAGCCGTCAGGTGAAGAATACGCCGGATTACCCA ACTGTGGCTATCGGTGGCATCAGTATTGAGCGGGTGCCACACGTATTAGCAACCGGCGTCGGCAGTGTCGCCGTGGTCAG CGCCATTACGTTGGCAAGTGACTGGCAACGGGCAACCGCACAATTACTGCACCTGATCGAGGGTAAGGAGTTGGCTGATG AAAAATGA
Upstream 100 bases:
>100_bases ATGTCGGCCGAGTTTCGCTCCCGTGGCAGTGAGCTATACCACCGCCCGGCGAATCTGAGTGCGGAGGCCAATAATGAGCC AACTTGATGCCCTCTCTCCT
Downstream 100 bases:
>100_bases CCAGACGCTAAGTGACAGTGAATTTTTACGCTATAGCCGCCAACTGCTACTGGAAGATATCGGCCCGGAAGGGCAACGAA AGCTAAAGGGTGCCAGTGTG
Product: thiamine-phosphate pyrophosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MATPGFPSTEQRLGLYPVVDSLLWIERLLAAGVTTLQLRIKNADDAQVEQDIVAAIELGKRYQARLFINDYWQLAVKHGA YGVHLGQEDLEAADLAAIQQAGLRLGISTHDEHELAVAKTLRPSYIALGHIFPTQTKQMPSSPQGLASLSRQVKNTPDYP TVAIGGISIERVPHVLATGVGSVAVVSAITLASDWQRATAQLLHLIEGKELADEK
Sequences:
>Translated_215_residues MATPGFPSTEQRLGLYPVVDSLLWIERLLAAGVTTLQLRIKNADDAQVEQDIVAAIELGKRYQARLFINDYWQLAVKHGA YGVHLGQEDLEAADLAAIQQAGLRLGISTHDEHELAVAKTLRPSYIALGHIFPTQTKQMPSSPQGLASLSRQVKNTPDYP TVAIGGISIERVPHVLATGVGSVAVVSAITLASDWQRATAQLLHLIEGKELADEK >Mature_214_residues ATPGFPSTEQRLGLYPVVDSLLWIERLLAAGVTTLQLRIKNADDAQVEQDIVAAIELGKRYQARLFINDYWQLAVKHGAY GVHLGQEDLEAADLAAIQQAGLRLGISTHDEHELAVAKTLRPSYIALGHIFPTQTKQMPSSPQGLASLSRQVKNTPDYPT VAIGGISIERVPHVLATGVGSVAVVSAITLASDWQRATAQLLHLIEGKELADEK
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
Organism=Escherichia coli, GI1790426, Length=205, Percent_Identity=70.7317073170732, Blast_Score=295, Evalue=1e-81, Organism=Saccharomyces cerevisiae, GI6325042, Length=228, Percent_Identity=28.0701754385965, Blast_Score=68, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 23275; Mature: 23144
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPGFPSTEQRLGLYPVVDSLLWIERLLAAGVTTLQLRIKNADDAQVEQDIVAAIELGK CCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCC RYQARLFINDYWQLAVKHGAYGVHLGQEDLEAADLAAIQQAGLRLGISTHDEHELAVAKT HHEEEEEEHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHH LRPSYIALGHIFPTQTKQMPSSPQGLASLSRQVKNTPDYPTVAIGGISIERVPHVLATGV CCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCC GSVAVVSAITLASDWQRATAQLLHLIEGKELADEK CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ATPGFPSTEQRLGLYPVVDSLLWIERLLAAGVTTLQLRIKNADDAQVEQDIVAAIELGK CCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCC RYQARLFINDYWQLAVKHGAYGVHLGQEDLEAADLAAIQQAGLRLGISTHDEHELAVAKT HHEEEEEEHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHH LRPSYIALGHIFPTQTKQMPSSPQGLASLSRQVKNTPDYPTVAIGGISIERVPHVLATGV CCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCC GSVAVVSAITLASDWQRATAQLLHLIEGKELADEK CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA