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The map label for this gene is yhdH [H]

Identifier: 218930674

GI number: 218930674

Start: 4083666

End: 4084643

Strand: Reverse

Name: yhdH [H]

Synonym: YPO3663

Alternate gene names: 218930674

Gene position: 4084643-4083666 (Counterclockwise)

Preceding gene: 218930684

Following gene: 218930673

Centisome position: 87.77

GC content: 52.25

Gene sequence:

>978_bases
ATGCGAGCACTGATACTTGAGCAAATTGAAGGGCGTACCACCGCAGAAGTACGTCAAATTTCGGCCTCACAACTGCCTGC
GGGTAATGTCACCGTAGATGTCAATTGGTCCAGCCTGAATTATAAAGATGCGTTGGCGATTACGGGGCAAGGGAAGATTA
TTCGCCAGTTTCCGATGGTACCGGGTATTGATTTCGCCGGCACAGTACACAGCAGCGAAGATCCACGTTTTCATATCGGC
CAATCGGTCTTATTAACCGGTTGGGGAGTAGGTGAAAACCATTGGGGAGGACTCGCCGAGCAAGCACGAGTGAATGGCGA
CTGGCTTGTCCCCATGCCAGACGGACTGGATGCACGTAAAGCGATGATTATTGGTACCGCAGGTTTTACCGCCATGCTGT
GCGTCATGGCACTGGAAGACGGTGGTGTGACCCCGAAAAGCGGTGAAGTGGTAGTAACCGGGGCCAGTGGTGGCGTTGGT
AGCACAGCAATTGCCTTGCTTTCAGCGTTAGGCTACCAGATTGCCGCTATTTCTGGCCGCGACAGCAACAGTGACTATCT
AAAGAACTTGGGCGCACAACGGATATTACCGCGCAGTGATTATCTTGATGCTTCACGACCACTGGAAAAACAGCTCTGGG
CAGGGGCGATTGATACTGTGGGTGATAGCATGTTGGCCAAAATACTGGCCCAGATGAATTATAACGGTACCGTCGCGGCG
TGTGGCCTGGCAGGCGGTTATAATCTGCCAACCACCGTCATGCCATTTATTCTGCGTAATATTCGCCTACAGGGCGTGGA
TTCAGTGATGACACCACAACCTCGCCGTCTGCAAGCCTGGCAGCGATTACAGAAAATTTTGCCTGAAAGTTTCTATCAGC
AAGCATCACAAGCCATCACGCTGGCTGATACGCCCACGATTGCGGCCAGGTTACTGGCAAATGAAGTCACCGGGCGTACC
TTAGTCAAAGTCCGCTGA

Upstream 100 bases:

>100_bases
ATTGACATTGCCGTAAGCGAATCACCCATCGTCCACGTCACGAGAGCGGCTGACACGGCGGCAACGTTAAGTAAGAAGAG
GGGTCATTAGGGAGCACGAC

Downstream 100 bases:

>100_bases
TTTTTTCTTATTCGCTGACGGCACTCAATTTACTGGCGACACTCACCCCCACTAATTAATCGTTACAGCAACCACCGAGG
TCAGTTTCACACTTGCCTCG

Product: putative zinc-binding dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MRALILEQIEGRTTAEVRQISASQLPAGNVTVDVNWSSLNYKDALAITGQGKIIRQFPMVPGIDFAGTVHSSEDPRFHIG
QSVLLTGWGVGENHWGGLAEQARVNGDWLVPMPDGLDARKAMIIGTAGFTAMLCVMALEDGGVTPKSGEVVVTGASGGVG
STAIALLSALGYQIAAISGRDSNSDYLKNLGAQRILPRSDYLDASRPLEKQLWAGAIDTVGDSMLAKILAQMNYNGTVAA
CGLAGGYNLPTTVMPFILRNIRLQGVDSVMTPQPRRLQAWQRLQKILPESFYQQASQAITLADTPTIAARLLANEVTGRT
LVKVR

Sequences:

>Translated_325_residues
MRALILEQIEGRTTAEVRQISASQLPAGNVTVDVNWSSLNYKDALAITGQGKIIRQFPMVPGIDFAGTVHSSEDPRFHIG
QSVLLTGWGVGENHWGGLAEQARVNGDWLVPMPDGLDARKAMIIGTAGFTAMLCVMALEDGGVTPKSGEVVVTGASGGVG
STAIALLSALGYQIAAISGRDSNSDYLKNLGAQRILPRSDYLDASRPLEKQLWAGAIDTVGDSMLAKILAQMNYNGTVAA
CGLAGGYNLPTTVMPFILRNIRLQGVDSVMTPQPRRLQAWQRLQKILPESFYQQASQAITLADTPTIAARLLANEVTGRT
LVKVR
>Mature_325_residues
MRALILEQIEGRTTAEVRQISASQLPAGNVTVDVNWSSLNYKDALAITGQGKIIRQFPMVPGIDFAGTVHSSEDPRFHIG
QSVLLTGWGVGENHWGGLAEQARVNGDWLVPMPDGLDARKAMIIGTAGFTAMLCVMALEDGGVTPKSGEVVVTGASGGVG
STAIALLSALGYQIAAISGRDSNSDYLKNLGAQRILPRSDYLDASRPLEKQLWAGAIDTVGDSMLAKILAQMNYNGTVAA
CGLAGGYNLPTTVMPFILRNIRLQGVDSVMTPQPRRLQAWQRLQKILPESFYQQASQAITLADTPTIAARLLANEVTGRT
LVKVR

Specific function: Unknown

COG id: COG0604

COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789651, Length=324, Percent_Identity=74.3827160493827, Blast_Score=508, Evalue=1e-145,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040
- InterPro:   IPR014188 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: NA

Molecular weight: Translated: 34700; Mature: 34700

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALILEQIEGRTTAEVRQISASQLPAGNVTVDVNWSSLNYKDALAITGQGKIIRQFPMV
CCCHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEECCCCEEEECCCC
PGIDFAGTVHSSEDPRFHIGQSVLLTGWGVGENHWGGLAEQARVNGDWLVPMPDGLDARK
CCCCCCCCCCCCCCCCEECCCEEEEEECCCCCCCCCCCHHHHCCCCCEEEECCCCCCCCE
AMIIGTAGFTAMLCVMALEDGGVTPKSGEVVVTGASGGVGSTAIALLSALGYQIAAISGR
EEEEECCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCEEEEECCC
DSNSDYLKNLGAQRILPRSDYLDASRPLEKQLWAGAIDTVGDSMLAKILAQMNYNGTVAA
CCCHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
CGLAGGYNLPTTVMPFILRNIRLQGVDSVMTPQPRRLQAWQRLQKILPESFYQQASQAIT
EECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEE
LADTPTIAARLLANEVTGRTLVKVR
ECCCHHHHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure
MRALILEQIEGRTTAEVRQISASQLPAGNVTVDVNWSSLNYKDALAITGQGKIIRQFPMV
CCCHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEECCCCEEEECCCC
PGIDFAGTVHSSEDPRFHIGQSVLLTGWGVGENHWGGLAEQARVNGDWLVPMPDGLDARK
CCCCCCCCCCCCCCCCEECCCEEEEEECCCCCCCCCCCHHHHCCCCCEEEECCCCCCCCE
AMIIGTAGFTAMLCVMALEDGGVTPKSGEVVVTGASGGVGSTAIALLSALGYQIAAISGR
EEEEECCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCEEEEECCC
DSNSDYLKNLGAQRILPRSDYLDASRPLEKQLWAGAIDTVGDSMLAKILAQMNYNGTVAA
CCCHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
CGLAGGYNLPTTVMPFILRNIRLQGVDSVMTPQPRRLQAWQRLQKILPESFYQQASQAIT
EECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEE
LADTPTIAARLLANEVTGRTLVKVR
ECCCHHHHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1370469; 9278503 [H]