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The map label for this gene is yrbH [C]

Identifier: 218930648

GI number: 218930648

Start: 4059509

End: 4060114

Strand: Direct

Name: yrbH [C]

Synonym: YPO3638

Alternate gene names: 218930648

Gene position: 4059509-4060114 (Clockwise)

Preceding gene: 218930647

Following gene: 218930650

Centisome position: 87.23

GC content: 50.83

Gene sequence:

>606_bases
ATGAGCCAGAATAAGGAGTGGCTGGCAGCCAGTGATGCCTGGATGATCTACAGCCGCGAACTGGCGGCATTAAAAGAGAA
TGTCGATCAACAGGTGTGGTTGCAGGTACTGGATGCCTTGGCTGAATGCCGTGGAAAAATTGCGGTGACGGGGGTGGGGA
CATCGGGTATTGCGGCCCGTAAAGTGGCGCATATGCTAGCTTGTGTTGAGCAACCGGCGATTTACCTGAATGCAACTGAT
GCGGCACACGGTGATCTGGGGTTTCTCGGCGCGCAGGACATCATTATTTTGATTTCCCGTGGCGGTAATTCTGATGAGTT
AACCCGTTTGCTGCCCACCTTGCAACGTAAGCAGGTGAAGATTATCAGCGTGACGGAAAATGAACAGTCTGCGATTGCGC
AGGTCTCCGCGTTGGTGCTGAAGACACATGTAAAGCAGGAGATCGATCCGCTGAATATGTTAGCGACAACATCGATTGTT
TTAGTACTGGCGCTGTTTGATGCTATCTGTGCCTGTCTAATGGCGCGTACTGGTTTTAGTAAAGAGACTTTATTGGCGGT
TCATCCCGGTGGAGATGTCGGGATGGTGTTACGTAAGCAGCAATAA

Upstream 100 bases:

>100_bases
AAACCAATAAAATCAAAGCCTATTACGATCGTAAGTACCGGGTATTCCATCAGATGTATCACGACCATATGCGCTATCAG
GCACTGATGCAGGAGGGCGC

Downstream 100 bases:

>100_bases
TCAATACTCATGATAGCCCGCGTGAAAGAGAAACACCGCAACGGTATGGCCGCGCGGTGTTTTTTTATGTCAGTACTCTT
CGGCTATCATCAACGTTCAA

Product: putative phosphosugar isomerase/binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MSQNKEWLAASDAWMIYSRELAALKENVDQQVWLQVLDALAECRGKIAVTGVGTSGIAARKVAHMLACVEQPAIYLNATD
AAHGDLGFLGAQDIIILISRGGNSDELTRLLPTLQRKQVKIISVTENEQSAIAQVSALVLKTHVKQEIDPLNMLATTSIV
LVLALFDAICACLMARTGFSKETLLAVHPGGDVGMVLRKQQ

Sequences:

>Translated_201_residues
MSQNKEWLAASDAWMIYSRELAALKENVDQQVWLQVLDALAECRGKIAVTGVGTSGIAARKVAHMLACVEQPAIYLNATD
AAHGDLGFLGAQDIIILISRGGNSDELTRLLPTLQRKQVKIISVTENEQSAIAQVSALVLKTHVKQEIDPLNMLATTSIV
LVLALFDAICACLMARTGFSKETLLAVHPGGDVGMVLRKQQ
>Mature_200_residues
SQNKEWLAASDAWMIYSRELAALKENVDQQVWLQVLDALAECRGKIAVTGVGTSGIAARKVAHMLACVEQPAIYLNATDA
AHGDLGFLGAQDIIILISRGGNSDELTRLLPTLQRKQVKIISVTENEQSAIAQVSALVLKTHVKQEIDPLNMLATTSIVL
VLALFDAICACLMARTGFSKETLLAVHPGGDVGMVLRKQQ

Specific function: Unknown

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=186, Percent_Identity=34.4086021505376, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI87082151, Length=186, Percent_Identity=29.5698924731183, Blast_Score=106, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 21677; Mature: 21545

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQNKEWLAASDAWMIYSRELAALKENVDQQVWLQVLDALAECRGKIAVTGVGTSGIAAR
CCCCCCEEEECCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHH
KVAHMLACVEQPAIYLNATDAAHGDLGFLGAQDIIILISRGGNSDELTRLLPTLQRKQVK
HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCEE
IISVTENEQSAIAQVSALVLKTHVKQEIDPLNMLATTSIVLVLALFDAICACLMARTGFS
EEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KETLLAVHPGGDVGMVLRKQQ
CCEEEEECCCCCEEEEEECCC
>Mature Secondary Structure 
SQNKEWLAASDAWMIYSRELAALKENVDQQVWLQVLDALAECRGKIAVTGVGTSGIAAR
CCCCCEEEECCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHH
KVAHMLACVEQPAIYLNATDAAHGDLGFLGAQDIIILISRGGNSDELTRLLPTLQRKQVK
HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCEE
IISVTENEQSAIAQVSALVLKTHVKQEIDPLNMLATTSIVLVLALFDAICACLMARTGFS
EEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KETLLAVHPGGDVGMVLRKQQ
CCEEEEECCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]