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The map label for this gene is araB [H]

Identifier: 218930647

GI number: 218930647

Start: 4057875

End: 4059512

Strand: Direct

Name: araB [H]

Synonym: YPO3637

Alternate gene names: 218930647

Gene position: 4057875-4059512 (Clockwise)

Preceding gene: 218930646

Following gene: 218930648

Centisome position: 87.2

GC content: 52.26

Gene sequence:

>1638_bases
ATGGCAAGTTACTTTATCGGCGTAGACGTAGGGACCGGCAGTGCAAGAGCTGGGGTATTCGATTTGCAGGGCCGTATGGT
TGGGCAGGCCAGCCGTGAAATCACCATGTTTAAACCCAAGGCTGATTTTGTTGAGCAGTCTTCCGAGAATATTTGGCAAG
CGGTGTGTAATGCGGTGCGTGATGCGGTTAATCAGGCCGATATCAACCCGATTCAGGTCAAAGGGCTGGGTTTTGATGCG
ACTTGCTCGCTGGTGGTGTTGGATAAAGAAGGGAATCCACTGACGGTTAGCCCTTCAGGGCGCAATGAGCAAAATGTGAT
TGTTTGGATGGACCACCGGGCGATCACTCAGGCGGAGCGGATTAATGCCACCAAGCACCCGGTCCTGGAGTTTGTCGGTG
GTGTGATTTCGCCAGAAATGCAGACACCAAAGTTGTTGTGGTTAAAGCAACATATGCCGAACACGTGGAGTAATGTCGGC
CATCTGTTTGATCTACCAGATTTTCTTACCTGGCGTGCCACGAAAGATGAAACCCGTTCGCTCTGTTCCACCGTCTGCAA
ATGGACCTATCTGGGCCATGAAGATCGCTGGGATCCGTCCTACTTCAAATTGGTGGGGCTGGCCGATTTACTGGATAACA
ACGCGGCGAAGATCGGTGCGACGGTTAAACCCATGGGGGCACCGTTAGGGCATGGTTTAAGTCAGCGGGCAGCATCAGAA
ATGGGGTTGATCCCCGGTACGGCGGTCAGTGTGTCGATTATTGATGCTCACGCTGGGACGATTGGCATTCTCGGTGCCAG
TGGTGTGACGGGGGAAAATGCTAACTTTGATCGGCGGATTGCGCTGATTGGTGGCACCTCTACCGCCCATATGGCGATGT
CGCGCTCAGCACACTTTATCAGTGGTATTTGGGGGCCATATTATTCGGCCATTTTACCGGAATATTGGTTGAACGAGGGC
GGGCAGTCGGCAACGGGGGCTTTGATTGACCATATTATTCAATCACATCCTTGCTATCCGGCACTGCTGGAACAGGCTAA
AAATAAGGGCGAAACCATCTATGAGGCGCTGAATTATATTTTGCGTCAGATGGCGGGTGAACCTGAAAATATCGCGTTCC
TGACGAATGATATTCATATGTTGCCGTACTTCCACGGTAACCGCTCTCCCCGTGCCAACCCAAATCTGACGGGCATTATT
ACTGGCCTGAAACTCTCTACCACGCCAGAAGATATGGCGCTGCGTTATTTGGCAACCATTCAGGCGCTGGCGTTGGGCAC
ACGGCATATTATCGAAACCATGAATCAGAATGGCTATAACATCGACACTATGATGGCCAGCGGCGGAGGCACCAAGAACC
CCATATTTGTACAGGAGCATGCGAATGCGACGGGCTGCGCCATGCTGTTGCCAGAAGAGAGTGAGGCGATGCTGTTGGGG
AGTGCCATGATGGGTACCGTCGCTGCTGGGGTGTTTGAGTCATTGCCGGAAGCCATGGCGGCCATGAGCCGCATCGGTAA
GACCGTGACCCCACAAACCAATAAAATCAAAGCCTATTACGATCGTAAGTACCGGGTATTCCATCAGATGTATCACGACC
ATATGCGCTATCAGGCACTGATGCAGGAGGGCGCATGA

Upstream 100 bases:

>100_bases
GGGGGTGAGTAGCTACCTGACCATGGCGTTATGGGGTGGGGTACTGATCCTCTTTATCGCATTACAGAATCGTAAAGCCT
AAGAATTGAGGGACAAAACA

Downstream 100 bases:

>100_bases
GCCAGAATAAGGAGTGGCTGGCAGCCAGTGATGCCTGGATGATCTACAGCCGCGAACTGGCGGCATTAAAAGAGAATGTC
GATCAACAGGTGTGGTTGCA

Product: putative carbohydrate kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 545; Mature: 544

Protein sequence:

>545_residues
MASYFIGVDVGTGSARAGVFDLQGRMVGQASREITMFKPKADFVEQSSENIWQAVCNAVRDAVNQADINPIQVKGLGFDA
TCSLVVLDKEGNPLTVSPSGRNEQNVIVWMDHRAITQAERINATKHPVLEFVGGVISPEMQTPKLLWLKQHMPNTWSNVG
HLFDLPDFLTWRATKDETRSLCSTVCKWTYLGHEDRWDPSYFKLVGLADLLDNNAAKIGATVKPMGAPLGHGLSQRAASE
MGLIPGTAVSVSIIDAHAGTIGILGASGVTGENANFDRRIALIGGTSTAHMAMSRSAHFISGIWGPYYSAILPEYWLNEG
GQSATGALIDHIIQSHPCYPALLEQAKNKGETIYEALNYILRQMAGEPENIAFLTNDIHMLPYFHGNRSPRANPNLTGII
TGLKLSTTPEDMALRYLATIQALALGTRHIIETMNQNGYNIDTMMASGGGTKNPIFVQEHANATGCAMLLPEESEAMLLG
SAMMGTVAAGVFESLPEAMAAMSRIGKTVTPQTNKIKAYYDRKYRVFHQMYHDHMRYQALMQEGA

Sequences:

>Translated_545_residues
MASYFIGVDVGTGSARAGVFDLQGRMVGQASREITMFKPKADFVEQSSENIWQAVCNAVRDAVNQADINPIQVKGLGFDA
TCSLVVLDKEGNPLTVSPSGRNEQNVIVWMDHRAITQAERINATKHPVLEFVGGVISPEMQTPKLLWLKQHMPNTWSNVG
HLFDLPDFLTWRATKDETRSLCSTVCKWTYLGHEDRWDPSYFKLVGLADLLDNNAAKIGATVKPMGAPLGHGLSQRAASE
MGLIPGTAVSVSIIDAHAGTIGILGASGVTGENANFDRRIALIGGTSTAHMAMSRSAHFISGIWGPYYSAILPEYWLNEG
GQSATGALIDHIIQSHPCYPALLEQAKNKGETIYEALNYILRQMAGEPENIAFLTNDIHMLPYFHGNRSPRANPNLTGII
TGLKLSTTPEDMALRYLATIQALALGTRHIIETMNQNGYNIDTMMASGGGTKNPIFVQEHANATGCAMLLPEESEAMLLG
SAMMGTVAAGVFESLPEAMAAMSRIGKTVTPQTNKIKAYYDRKYRVFHQMYHDHMRYQALMQEGA
>Mature_544_residues
ASYFIGVDVGTGSARAGVFDLQGRMVGQASREITMFKPKADFVEQSSENIWQAVCNAVRDAVNQADINPIQVKGLGFDAT
CSLVVLDKEGNPLTVSPSGRNEQNVIVWMDHRAITQAERINATKHPVLEFVGGVISPEMQTPKLLWLKQHMPNTWSNVGH
LFDLPDFLTWRATKDETRSLCSTVCKWTYLGHEDRWDPSYFKLVGLADLLDNNAAKIGATVKPMGAPLGHGLSQRAASEM
GLIPGTAVSVSIIDAHAGTIGILGASGVTGENANFDRRIALIGGTSTAHMAMSRSAHFISGIWGPYYSAILPEYWLNEGG
QSATGALIDHIIQSHPCYPALLEQAKNKGETIYEALNYILRQMAGEPENIAFLTNDIHMLPYFHGNRSPRANPNLTGIIT
GLKLSTTPEDMALRYLATIQALALGTRHIIETMNQNGYNIDTMMASGGGTKNPIFVQEHANATGCAMLLPEESEAMLLGS
AMMGTVAAGVFESLPEAMAAMSRIGKTVTPQTNKIKAYYDRKYRVFHQMYHDHMRYQALMQEGA

Specific function: Unknown

COG id: COG1069

COG function: function code C; Ribulose kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulokinase family [H]

Homologues:

Organism=Homo sapiens, GI164663828, Length=545, Percent_Identity=49.9082568807339, Blast_Score=561, Evalue=1e-160,
Organism=Homo sapiens, GI164663830, Length=569, Percent_Identity=47.8031634446397, Blast_Score=547, Evalue=1e-156,
Organism=Escherichia coli, GI1786249, Length=495, Percent_Identity=25.6565656565657, Blast_Score=98, Evalue=2e-21,
Organism=Escherichia coli, GI1790005, Length=547, Percent_Identity=20.2925045703839, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1789987, Length=534, Percent_Identity=22.0973782771536, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1787789, Length=276, Percent_Identity=25.7246376811594, Blast_Score=63, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6320314, Length=523, Percent_Identity=37.2848948374761, Blast_Score=365, Evalue=1e-102,
Organism=Saccharomyces cerevisiae, GI6324080, Length=503, Percent_Identity=26.441351888668, Blast_Score=156, Evalue=7e-39,
Organism=Drosophila melanogaster, GI24657106, Length=543, Percent_Identity=46.7771639042357, Blast_Score=504, Evalue=1e-143,
Organism=Drosophila melanogaster, GI24657102, Length=543, Percent_Identity=46.7771639042357, Blast_Score=504, Evalue=1e-143,
Organism=Drosophila melanogaster, GI21356323, Length=437, Percent_Identity=45.5377574370709, Blast_Score=389, Evalue=1e-108,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR005929 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.16 [H]

Molecular weight: Translated: 59462; Mature: 59330

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASYFIGVDVGTGSARAGVFDLQGRMVGQASREITMFKPKADFVEQSSENIWQAVCNAVR
CCEEEEEEEECCCCCCCCEEECCCCHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH
DAVNQADINPIQVKGLGFDATCSLVVLDKEGNPLTVSPSGRNEQNVIVWMDHRAITQAER
HHHHHCCCCEEEEEECCCCCEEEEEEEECCCCEEEECCCCCCCCEEEEEECCHHHHHHHH
INATKHPVLEFVGGVISPEMQTPKLLWLKQHMPNTWSNVGHLFDLPDFLTWRATKDETRS
CCCCHHHHHHHHCCCCCCCCCCCCEEEEHHHCCCCHHHCCCCCCCCHHHEECCCHHHHHH
LCSTVCKWTYLGHEDRWDPSYFKLVGLADLLDNNAAKIGATVKPMGAPLGHGLSQRAASE
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCHHHHHHHH
MGLIPGTAVSVSIIDAHAGTIGILGASGVTGENANFDRRIALIGGTSTAHMAMSRSAHFI
CCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCHHH
SGIWGPYYSAILPEYWLNEGGQSATGALIDHIIQSHPCYPALLEQAKNKGETIYEALNYI
HHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHH
LRQMAGEPENIAFLTNDIHMLPYFHGNRSPRANPNLTGIITGLKLSTTPEDMALRYLATI
HHHHCCCCCCEEEEECCEEEEEEEECCCCCCCCCCCEEEEECCEECCCHHHHHHHHHHHH
QALALGTRHIIETMNQNGYNIDTMMASGGGTKNPIFVQEHANATGCAMLLPEESEAMLLG
HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEECCCCCCEEEECCCCCCCEEHH
SAMMGTVAAGVFESLPEAMAAMSRIGKTVTPQTNKIKAYYDRKYRVFHQMYHDHMRYQAL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
MQEGA
HHHCC
>Mature Secondary Structure 
ASYFIGVDVGTGSARAGVFDLQGRMVGQASREITMFKPKADFVEQSSENIWQAVCNAVR
CEEEEEEEECCCCCCCCEEECCCCHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH
DAVNQADINPIQVKGLGFDATCSLVVLDKEGNPLTVSPSGRNEQNVIVWMDHRAITQAER
HHHHHCCCCEEEEEECCCCCEEEEEEEECCCCEEEECCCCCCCCEEEEEECCHHHHHHHH
INATKHPVLEFVGGVISPEMQTPKLLWLKQHMPNTWSNVGHLFDLPDFLTWRATKDETRS
CCCCHHHHHHHHCCCCCCCCCCCCEEEEHHHCCCCHHHCCCCCCCCHHHEECCCHHHHHH
LCSTVCKWTYLGHEDRWDPSYFKLVGLADLLDNNAAKIGATVKPMGAPLGHGLSQRAASE
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCHHHHHHHH
MGLIPGTAVSVSIIDAHAGTIGILGASGVTGENANFDRRIALIGGTSTAHMAMSRSAHFI
CCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCHHH
SGIWGPYYSAILPEYWLNEGGQSATGALIDHIIQSHPCYPALLEQAKNKGETIYEALNYI
HHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHH
LRQMAGEPENIAFLTNDIHMLPYFHGNRSPRANPNLTGIITGLKLSTTPEDMALRYLATI
HHHHCCCCCCEEEEECCEEEEEEEECCCCCCCCCCCEEEEECCEECCCHHHHHHHHHHHH
QALALGTRHIIETMNQNGYNIDTMMASGGGTKNPIFVQEHANATGCAMLLPEESEAMLLG
HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEECCCCCCEEEECCCCCCCEEHH
SAMMGTVAAGVFESLPEAMAAMSRIGKTVTPQTNKIKAYYDRKYRVFHQMYHDHMRYQAL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
MQEGA
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9084180; 8969504; 9384377; 10417639 [H]