Click here to switch to the map view.

The map label for this gene is yhcB [H]

Identifier: 218930577

GI number: 218930577

Start: 3978143

End: 3978547

Strand: Direct

Name: yhcB [H]

Synonym: YPO3565

Alternate gene names: 218930577

Gene position: 3978143-3978547 (Clockwise)

Preceding gene: 218930571

Following gene: 218930578

Centisome position: 85.48

GC content: 48.15

Gene sequence:

>405_bases
ATGACCTGGGAGTATGCGCTTATTGGATTGGTTGTTGGTGTTGTGATCGGCGCGGTGGCTATGCGCTTTGGCAACCGCAA
ATTGCGTCAGCAACAAGTGCTGCAAAATGAGCTGGAGAAGAGCAAAACAGATTTGGAAGAGTATCGTCAAGAGCTGGTTG
GGCACTTCGCACGGAGTGCCGAGTTACTGGATAACATGGCCCGTGATTATCGTCAGCTTTATCAACATATGGCGAAAAGC
TCCAATAACTTATTACCGGACTTACCATTACAGGATAATCCGTTCCGTTACCGTCTGACAGAATCCGAAGCGGATAATGA
TCAGGCACCCGTTAAACTACCACCTCGTGATTACTCTGAAGGCGCATCTGGTTTATTACGCCCGGAACACCAGAATCGCG
ATTAA

Upstream 100 bases:

>100_bases
ACATTGCATCAGGATTCCACTCAGACAAGGTTAACGGTTATAGTGGGTATTATTAAGTGAAAAAGTTCTGCTGAACAATG
AAGTCAAAAAAGGAGTCATC

Downstream 100 bases:

>100_bases
GCTTGTGTTTAAACATCTATACTCACTGCGGTGGGGCACATCTCCGTTCCACCGCAACTCACTACATTTACACTTCTATA
CTTGCCTCTCCTTGAATTGC

Product: cytochrome d ubiquinol oxidase subunit III

Products: NA

Alternate protein names: Cytochrome bd-I oxidase subunit III [H]

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MTWEYALIGLVVGVVIGAVAMRFGNRKLRQQQVLQNELEKSKTDLEEYRQELVGHFARSAELLDNMARDYRQLYQHMAKS
SNNLLPDLPLQDNPFRYRLTESEADNDQAPVKLPPRDYSEGASGLLRPEHQNRD

Sequences:

>Translated_134_residues
MTWEYALIGLVVGVVIGAVAMRFGNRKLRQQQVLQNELEKSKTDLEEYRQELVGHFARSAELLDNMARDYRQLYQHMAKS
SNNLLPDLPLQDNPFRYRLTESEADNDQAPVKLPPRDYSEGASGLLRPEHQNRD
>Mature_133_residues
TWEYALIGLVVGVVIGAVAMRFGNRKLRQQQVLQNELEKSKTDLEEYRQELVGHFARSAELLDNMARDYRQLYQHMAKSS
NNLLPDLPLQDNPFRYRLTESEADNDQAPVKLPPRDYSEGASGLLRPEHQNRD

Specific function: Unknown

COG id: COG3105

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1628 [H]

Homologues:

Organism=Escherichia coli, GI87082232, Length=127, Percent_Identity=80.3149606299213, Blast_Score=194, Evalue=2e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009386 [H]

Pfam domain/function: PF06295 DUF1043 [H]

EC number: NA

Molecular weight: Translated: 15486; Mature: 15354

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWEYALIGLVVGVVIGAVAMRFGNRKLRQQQVLQNELEKSKTDLEEYRQELVGHFARSA
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELLDNMARDYRQLYQHMAKSSNNLLPDLPLQDNPFRYRLTESEADNDQAPVKLPPRDYSE
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC
GASGLLRPEHQNRD
CCCCCCCCCCCCCC
>Mature Secondary Structure 
TWEYALIGLVVGVVIGAVAMRFGNRKLRQQQVLQNELEKSKTDLEEYRQELVGHFARSA
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELLDNMARDYRQLYQHMAKSSNNLLPDLPLQDNPFRYRLTESEADNDQAPVKLPPRDYSE
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC
GASGLLRPEHQNRD
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]