| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218930571
Identifier: 218930571
GI number: 218930571
Start: 3973469
End: 3973954
Strand: Direct
Name: 218930571
Synonym: YPO3559
Alternate gene names: NA
Gene position: 3973469-3973954 (Clockwise)
Preceding gene: 218930570
Following gene: 218930577
Centisome position: 85.38
GC content: 47.53
Gene sequence:
>486_bases ATGAAATTTCACTTACCTTTTATTGTTGGCGGATTACTGGCGATGAGTAGCAGCGCATTCGCAATGTCTCTAAATTATCA AGAAGTTGGCTACAATATTGAGGCGCGGGGCGCACGTGCAGTGGTTGCCGAACTGGAGAAATCGGGGCAACTGCCAGCGG TTGAGAATAATATTAAGCTTGGTGATGATAACTGGATTGCTATGGCACCCAAATTAGCCAGTGCCGGTAATCCGAAGTTT ACTGAAGGGGTGAAATCTGCCCTCTCCTCTGCCCTGACTTATAACCCGGCAGCGGTATTAAAAGCAGTCAGTGGCAGTAA AATATTAACATTATCCGATGTTTGCACTGCACCGATAGATGTCAAAGACAGTGAGGCAAAAGCCAACTTCCAGCAGCGAG CGTCACGGACATTATTGACCATCAAGAACAGTGACATGGCAGGCCCACGTGATAGCTGCCTGGCTGAGCTCAAAAAACTG TCGTAG
Upstream 100 bases:
>100_bases ATCCACGATAGCGCTATAGTGAAGGCTTGGTTGTTAAGTGCAAGCCCCTCACAACTGGCATATACTGTCACACTTTGCTT TAAATAAAGGATAATCTGTT
Downstream 100 bases:
>100_bases CAATTATCAAGTAAATGAAAAACAGCCATCAAGTAAACGAAAAAACGCTACCAACAGCCAGCTAATCAAGATTCCCGCAC AAAACAGAAACGATAAGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MKFHLPFIVGGLLAMSSSAFAMSLNYQEVGYNIEARGARAVVAELEKSGQLPAVENNIKLGDDNWIAMAPKLASAGNPKF TEGVKSALSSALTYNPAAVLKAVSGSKILTLSDVCTAPIDVKDSEAKANFQQRASRTLLTIKNSDMAGPRDSCLAELKKL S
Sequences:
>Translated_161_residues MKFHLPFIVGGLLAMSSSAFAMSLNYQEVGYNIEARGARAVVAELEKSGQLPAVENNIKLGDDNWIAMAPKLASAGNPKF TEGVKSALSSALTYNPAAVLKAVSGSKILTLSDVCTAPIDVKDSEAKANFQQRASRTLLTIKNSDMAGPRDSCLAELKKL S >Mature_161_residues MKFHLPFIVGGLLAMSSSAFAMSLNYQEVGYNIEARGARAVVAELEKSGQLPAVENNIKLGDDNWIAMAPKLASAGNPKF TEGVKSALSSALTYNPAAVLKAVSGSKILTLSDVCTAPIDVKDSEAKANFQQRASRTLLTIKNSDMAGPRDSCLAELKKL S
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17047; Mature: 17047
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFHLPFIVGGLLAMSSSAFAMSLNYQEVGYNIEARGARAVVAELEKSGQLPAVENNIKL CEEECHHHHHHHHHHCCCCEEEEECHHHHCCCEECCCHHHHHHHHHHCCCCCCCCCCEEE GDDNWIAMAPKLASAGNPKFTEGVKSALSSALTYNPAAVLKAVSGSKILTLSDVCTAPID CCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEHHHCCCCCC VKDSEAKANFQQRASRTLLTIKNSDMAGPRDSCLAELKKLS CCCCHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MKFHLPFIVGGLLAMSSSAFAMSLNYQEVGYNIEARGARAVVAELEKSGQLPAVENNIKL CEEECHHHHHHHHHHCCCCEEEEECHHHHCCCEECCCHHHHHHHHHHCCCCCCCCCCEEE GDDNWIAMAPKLASAGNPKFTEGVKSALSSALTYNPAAVLKAVSGSKILTLSDVCTAPID CCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEHHHCCCCCC VKDSEAKANFQQRASRTLLTIKNSDMAGPRDSCLAELKKLS CCCCHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA