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The map label for this gene is ytfE [C]

Identifier: 218930545

GI number: 218930545

Start: 3944063

End: 3944728

Strand: Direct

Name: ytfE [C]

Synonym: YPO3531

Alternate gene names: 218930545

Gene position: 3944063-3944728 (Clockwise)

Preceding gene: 218930544

Following gene: 218930547

Centisome position: 84.75

GC content: 48.8

Gene sequence:

>666_bases
ATGGATTACCGCAATCAGTCTCTGGGCGCACTGGCTATCGCTATTCCTCGGGCCACAAAGTTATTCCGTCAACATCAGCT
CGATTTCTGCTGTGGCGGCAAACAAACACTCTTACGGGCCGCCAATAAGTTGAATCTGGATATTGATGCGCTGGAAGCAC
AATTGAGTGCATTGCAAACCGAACCTCACTCATCTGAAGATTGGCAACAACAGCCACTGACAAATCTCATTAGTTTTATC
ATCAGCCGCTACCATGATCGCCATCGTGAGCAGCTACCAGAACTGGTTCTCATGGCGGAAAAGGTTGAACGGGTACACGG
CGAGAAACCCACCTGTCCTCGTGGGCTGGCAGCAGAACTCAGTGCGATTTTAGAAGAGTTGACTCAACATATGTATAAAG
AGGAGCAGATCCTGTTCCCGATGATCCAACGAGGCATGGGTTCTCAGGCCAGTGGGCCAATATTTGTGATGGAAGCGGAG
CACGATGCGGTTGGGCAGCAATTAGACGTGGTAAAACAACTCACACAAAATGTGACACCACCAGAAGGGGCCTGTAATAC
CTGGCGGGCGCTTTACACCGGTATCAATGAATTCATTACTGACCTGATGGAACATATTCATCTGGAAAATAATTTACTGT
TTCCCCGTGCGCTAAGGGGCGAATAA

Upstream 100 bases:

>100_bases
TGGAGTTATATCACAATCTATAACATGCATTTATTATGCATGTTATAGGTGTATAATAAATACATGTTATAGATATATAA
TTACTCAATGAGGTGTCATT

Downstream 100 bases:

>100_bases
CTCACTAACTATTTATTCTCACCGTAAATATTCTTATCGTAAATAAACGCCAAAGGGCGACACCCTGTCGCCCTTTGGCA
TAATCGGTACCAAGGAATTA

Product: iron-sulfur cluster repair di-iron protein

Products: NA

Alternate protein names: RCMNS [H]

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MDYRNQSLGALAIAIPRATKLFRQHQLDFCCGGKQTLLRAANKLNLDIDALEAQLSALQTEPHSSEDWQQQPLTNLISFI
ISRYHDRHREQLPELVLMAEKVERVHGEKPTCPRGLAAELSAILEELTQHMYKEEQILFPMIQRGMGSQASGPIFVMEAE
HDAVGQQLDVVKQLTQNVTPPEGACNTWRALYTGINEFITDLMEHIHLENNLLFPRALRGE

Sequences:

>Translated_221_residues
MDYRNQSLGALAIAIPRATKLFRQHQLDFCCGGKQTLLRAANKLNLDIDALEAQLSALQTEPHSSEDWQQQPLTNLISFI
ISRYHDRHREQLPELVLMAEKVERVHGEKPTCPRGLAAELSAILEELTQHMYKEEQILFPMIQRGMGSQASGPIFVMEAE
HDAVGQQLDVVKQLTQNVTPPEGACNTWRALYTGINEFITDLMEHIHLENNLLFPRALRGE
>Mature_221_residues
MDYRNQSLGALAIAIPRATKLFRQHQLDFCCGGKQTLLRAANKLNLDIDALEAQLSALQTEPHSSEDWQQQPLTNLISFI
ISRYHDRHREQLPELVLMAEKVERVHGEKPTCPRGLAAELSAILEELTQHMYKEEQILFPMIQRGMGSQASGPIFVMEAE
HDAVGQQLDVVKQLTQNVTPPEGACNTWRALYTGINEFITDLMEHIHLENNLLFPRALRGE

Specific function: Involved in anaerobic NO protection [H]

COG id: COG2846

COG function: function code D; Regulator of cell morphogenesis and NO signaling

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790654, Length=221, Percent_Identity=61.5384615384615, Blast_Score=296, Evalue=7e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007500
- InterPro:   IPR019903
- InterPro:   IPR012312 [H]

Pfam domain/function: PF01814 Hemerythrin; PF04405 ScdA_N [H]

EC number: NA

Molecular weight: Translated: 25063; Mature: 25063

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYRNQSLGALAIAIPRATKLFRQHQLDFCCGGKQTLLRAANKLNLDIDALEAQLSALQT
CCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHC
EPHSSEDWQQQPLTNLISFIISRYHDRHREQLPELVLMAEKVERVHGEKPTCPRGLAAEL
CCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
SAILEELTQHMYKEEQILFPMIQRGMGSQASGPIFVMEAEHDAVGQQLDVVKQLTQNVTP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCC
PEGACNTWRALYTGINEFITDLMEHIHLENNLLFPRALRGE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCC
>Mature Secondary Structure
MDYRNQSLGALAIAIPRATKLFRQHQLDFCCGGKQTLLRAANKLNLDIDALEAQLSALQT
CCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHC
EPHSSEDWQQQPLTNLISFIISRYHDRHREQLPELVLMAEKVERVHGEKPTCPRGLAAEL
CCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
SAILEELTQHMYKEEQILFPMIQRGMGSQASGPIFVMEAEHDAVGQQLDVVKQLTQNVTP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCC
PEGACNTWRALYTGINEFITDLMEHIHLENNLLFPRALRGE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA