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The map label for this gene is yhbY [H]

Identifier: 218930518

GI number: 218930518

Start: 3914946

End: 3915239

Strand: Direct

Name: yhbY [H]

Synonym: YPO3504

Alternate gene names: 218930518

Gene position: 3914946-3915239 (Clockwise)

Preceding gene: 218930498

Following gene: 218930520

Centisome position: 84.12

GC content: 43.88

Gene sequence:

>294_bases
ATGAATCTGAATAACAAACAAAAACAGCACCTGAAAAGCTTGGCCCATCCGTTAAAACCAGTAGTCATGCTGGGCAATAA
CGGCTTAACCGAAGGGGTGCTGGCTGAAATCGAACAAACGCTAGCACATCATGAACTTATTAAGGTGAAAATCACTGCTG
AAGAGCGTGAAACCAAAGCCCTAATTGCTGACGCTATTGTGCGTGAGACCGGTGCCGTTAACGTCCAAATGATCGGTAAT
ATTTTAGTACTCTATCGCCCGGCGAAAGAACGCAAAATTATTTTACCGCGTTAA

Upstream 100 bases:

>100_bases
AGCTCGCGTAAACTCCTTACCGGCGTAGACCGATTTGGTGATACACATGAGATGGCGGTAGAATGAACCGTTTTCAATCC
CAACTTAAGCAAAAAAGACG

Downstream 100 bases:

>100_bases
TGACGCTTGTTTTAGAGAAAGGTGCCATGCACTTTGTTCTGATAAAAGGCCGCTTGCGGCCTTTTACTTTTCTTTACAAC
TTTATTTTATAACTTAATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MNLNNKQKQHLKSLAHPLKPVVMLGNNGLTEGVLAEIEQTLAHHELIKVKITAEERETKALIADAIVRETGAVNVQMIGN
ILVLYRPAKERKIILPR

Sequences:

>Translated_97_residues
MNLNNKQKQHLKSLAHPLKPVVMLGNNGLTEGVLAEIEQTLAHHELIKVKITAEERETKALIADAIVRETGAVNVQMIGN
ILVLYRPAKERKIILPR
>Mature_97_residues
MNLNNKQKQHLKSLAHPLKPVVMLGNNGLTEGVLAEIEQTLAHHELIKVKITAEERETKALIADAIVRETGAVNVQMIGN
ILVLYRPAKERKIILPR

Specific function: Unknown

COG id: COG1534

COG function: function code J; Predicted RNA-binding protein containing KH domain, possibly ribosomal protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CRM domain [H]

Homologues:

Organism=Escherichia coli, GI1789570, Length=97, Percent_Identity=80.4123711340206, Blast_Score=158, Evalue=6e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001890
- InterPro:   IPR017924
- ProDom:   PD010559 [H]

Pfam domain/function: PF01985 CRS1_YhbY [H]

EC number: NA

Molecular weight: Translated: 10835; Mature: 10835

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLNNKQKQHLKSLAHPLKPVVMLGNNGLTEGVLAEIEQTLAHHELIKVKITAEERETKA
CCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHEEEEEEECCCHHHHH
LIADAIVRETGAVNVQMIGNILVLYRPAKERKIILPR
HHHHHHHHHCCCEEEEEECCEEEEEECCCCCEEECCC
>Mature Secondary Structure
MNLNNKQKQHLKSLAHPLKPVVMLGNNGLTEGVLAEIEQTLAHHELIKVKITAEERETKA
CCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHEEEEEEECCCHHHHH
LIADAIVRETGAVNVQMIGNILVLYRPAKERKIILPR
HHHHHHHHHCCCEEEEEECCEEEEEECCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]