Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is gltX [H]
Identifier: 218930033
GI number: 218930033
Start: 3333476
End: 3334891
Strand: Direct
Name: gltX [H]
Synonym: YPO2984
Alternate gene names: 218930033
Gene position: 3333476-3334891 (Clockwise)
Preceding gene: 218930032
Following gene: 218930034
Centisome position: 71.63
GC content: 49.22
Gene sequence:
>1416_bases ATGAAAATCAAAACCCGTTTTGCACCTAGTCCTACCGGCTATCTCCACGTGGGTGGCGCGCGTACTGCGCTCTACTCCTG GCTATTCAGCCGCCATTTAGGTGGCGAATTTGTGCTGCGTATTGAAGACACCGATCTTGGACGCTCTACACAGGAAGCTA TCGATGCCATTATGGACGGTATGAACTGGCTGAATCTGGATTGGGATGAAGGCCCGTATTTCCAAACCAAGCGTTTTGAT CGCTATAACGCCGTTATTGACCAAATGCTTGATGCCGGTACAGCTTATCGCTGCTATTGCTCTAAAGAACGCCTGGAAGC ATTGCGTGAAGCTCAAATGGCTAACGGAGAAAAGCCCCGCTACGATGGTCACTGCCGTGACAGCCAATGTACTCATGGCG CTGATGAGCCGTCAGTGGTGCGTTTCCGTAACCCGCAGGAAGGCTCTGTTATTTTTGATGATAAAATTCGCGGGCCAATC GAATTCAGCAATCAGGAACTGGATGACTTGATCATCCGCAGAACCGATGGTTCCCCAACCTATAATTTCTGCGTGGTGAT TGATGACTGGGATATGGAGATCACCCATGTTATCCGTGGTGAAGACCATATTAACAACACACCTCGCCAGATTAATATTC TAAAAGCATTAGGTGCACCAGTACCTGAGTATGCTCACGTCTCAATGATTTTGGGCGATGATGGCAAAAAGCTGTCTAAA CGCCACGGGGCTGTTGGCGTCATGCAATACCGTGATGACGGGTACTTACCAGAAGCGTTGTTGAACTATTTAGTCCGTTT AGGGTGGTCCCATGGCGACCAAGAGATTTTCTCTATTGAAGAGATGACCCAGTTATTTACCCTGGATGCCGTCAGTAAAT CAGCCAGTGCCTTTAATACCGAAAAACTTCAGTGGCTGAATCATCACTATATCAATAGCCTGCCACCTGAACAGGTTGCC GTACACCTTTCATGGCATGTTGAACAACTGGGTATTGATACACGTAATGGCCCTGAACTCGTTGAGATAGTAAAACTGCT GGGCGAACGTTGTAAAACACTGAAAGAAATGGCGGAGTCCTGCCGTTACTTCTATGAAGAGTTTGACGCATTTGATGTAG ATGCCGCTAAGAAGCACCTGCGCCCCATTGCCCGCCAGCCTTTGGAAGCCGTTAAAGTTAAACTCGCCGCCATCACCGAA TGGACCACAGAGAACGTCCACAACGCCATTCAGGGCACCGCGGATGAGTTAGGTGTCGGTATGGGTAAAGTGGGTATGCC ACTGCGTGTTGCCGTGACAGGCGTTGGTCAATCACCCGGCATGGATGTGACTGTTCATGCTATCGGTCAAGCGCGCACGC TGGCACGTATTGATAAAGCTCTGGCCTTTATCAGCGAACGCGAAGCTCAACAGTAA
Upstream 100 bases:
>100_bases AGGAATTACCACACAGTGGTAGAATGTCGCCTACTTTTTAGAATTTCGAACAACTGTCAGCCTCTGCGGGCAGGCGTAGC GTAATAAGGCATCAATCCCA
Downstream 100 bases:
>100_bases AATTTATCATTTTCCGTGTTATCAGGCGGCCACTCTGGTCGCCTTTTTTGTGCCCAGAAAACCCCCAGCTAGGCTGGGGG TTCAGTAAAGCTTTCAGCTT
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS [H]
Number of amino acids: Translated: 471; Mature: 471
Protein sequence:
>471_residues MKIKTRFAPSPTGYLHVGGARTALYSWLFSRHLGGEFVLRIEDTDLGRSTQEAIDAIMDGMNWLNLDWDEGPYFQTKRFD RYNAVIDQMLDAGTAYRCYCSKERLEALREAQMANGEKPRYDGHCRDSQCTHGADEPSVVRFRNPQEGSVIFDDKIRGPI EFSNQELDDLIIRRTDGSPTYNFCVVIDDWDMEITHVIRGEDHINNTPRQINILKALGAPVPEYAHVSMILGDDGKKLSK RHGAVGVMQYRDDGYLPEALLNYLVRLGWSHGDQEIFSIEEMTQLFTLDAVSKSASAFNTEKLQWLNHHYINSLPPEQVA VHLSWHVEQLGIDTRNGPELVEIVKLLGERCKTLKEMAESCRYFYEEFDAFDVDAAKKHLRPIARQPLEAVKVKLAAITE WTTENVHNAIQGTADELGVGMGKVGMPLRVAVTGVGQSPGMDVTVHAIGQARTLARIDKALAFISEREAQQ
Sequences:
>Translated_471_residues MKIKTRFAPSPTGYLHVGGARTALYSWLFSRHLGGEFVLRIEDTDLGRSTQEAIDAIMDGMNWLNLDWDEGPYFQTKRFD RYNAVIDQMLDAGTAYRCYCSKERLEALREAQMANGEKPRYDGHCRDSQCTHGADEPSVVRFRNPQEGSVIFDDKIRGPI EFSNQELDDLIIRRTDGSPTYNFCVVIDDWDMEITHVIRGEDHINNTPRQINILKALGAPVPEYAHVSMILGDDGKKLSK RHGAVGVMQYRDDGYLPEALLNYLVRLGWSHGDQEIFSIEEMTQLFTLDAVSKSASAFNTEKLQWLNHHYINSLPPEQVA VHLSWHVEQLGIDTRNGPELVEIVKLLGERCKTLKEMAESCRYFYEEFDAFDVDAAKKHLRPIARQPLEAVKVKLAAITE WTTENVHNAIQGTADELGVGMGKVGMPLRVAVTGVGQSPGMDVTVHAIGQARTLARIDKALAFISEREAQQ >Mature_471_residues MKIKTRFAPSPTGYLHVGGARTALYSWLFSRHLGGEFVLRIEDTDLGRSTQEAIDAIMDGMNWLNLDWDEGPYFQTKRFD RYNAVIDQMLDAGTAYRCYCSKERLEALREAQMANGEKPRYDGHCRDSQCTHGADEPSVVRFRNPQEGSVIFDDKIRGPI EFSNQELDDLIIRRTDGSPTYNFCVVIDDWDMEITHVIRGEDHINNTPRQINILKALGAPVPEYAHVSMILGDDGKKLSK RHGAVGVMQYRDDGYLPEALLNYLVRLGWSHGDQEIFSIEEMTQLFTLDAVSKSASAFNTEKLQWLNHHYINSLPPEQVA VHLSWHVEQLGIDTRNGPELVEIVKLLGERCKTLKEMAESCRYFYEEFDAFDVDAAKKHLRPIARQPLEAVKVKLAAITE WTTENVHNAIQGTADELGVGMGKVGMPLRVAVTGVGQSPGMDVTVHAIGQARTLARIDKALAFISEREAQQ
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) [H]
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=491, Percent_Identity=30.7535641547862, Blast_Score=221, Evalue=1e-57, Organism=Escherichia coli, GI1788743, Length=471, Percent_Identity=84.0764331210191, Blast_Score=842, Evalue=0.0, Organism=Escherichia coli, GI226510925, Length=301, Percent_Identity=34.21926910299, Blast_Score=145, Evalue=5e-36, Organism=Escherichia coli, GI1786895, Length=119, Percent_Identity=26.0504201680672, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71993394, Length=321, Percent_Identity=38.9408099688474, Blast_Score=219, Evalue=3e-57, Organism=Saccharomyces cerevisiae, GI6324540, Length=499, Percent_Identity=31.062124248497, Blast_Score=246, Evalue=6e-66, Organism=Saccharomyces cerevisiae, GI6321192, Length=230, Percent_Identity=26.9565217391304, Blast_Score=79, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6324742, Length=213, Percent_Identity=24.4131455399061, Blast_Score=71, Evalue=4e-13, Organism=Drosophila melanogaster, GI24665321, Length=491, Percent_Identity=30.5498981670061, Blast_Score=248, Evalue=7e-66,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: =6.1.1.17 [H]
Molecular weight: Translated: 53111; Mature: 53111
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKTRFAPSPTGYLHVGGARTALYSWLFSRHLGGEFVLRIEDTDLGRSTQEAIDAIMDG CCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCC MNWLNLDWDEGPYFQTKRFDRYNAVIDQMLDAGTAYRCYCSKERLEALREAQMANGEKPR CCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCCCC YDGHCRDSQCTHGADEPSVVRFRNPQEGSVIFDDKIRGPIEFSNQELDDLIIRRTDGSPT CCCCCCCCCCCCCCCCCCEEEECCCCCCCEEECCCCCCCCCCCCCCCCHHEEEECCCCCC YNFCVVIDDWDMEITHVIRGEDHINNTPRQINILKALGAPVPEYAHVSMILGDDGKKLSK EEEEEEEECCCCEEEEEECCCHHCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHH RHGAVGVMQYRDDGYLPEALLNYLVRLGWSHGDQEIFSIEEMTQLFTLDAVSKSASAFNT HCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH EKLQWLNHHYINSLPPEQVAVHLSWHVEQLGIDTRNGPELVEIVKLLGERCKTLKEMAES HHHHHHHHHHCCCCCHHHEEEEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH CRYFYEEFDAFDVDAAKKHLRPIARQPLEAVKVKLAAITEWTTENVHNAIQGTADELGVG HHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC MGKVGMPLRVAVTGVGQSPGMDVTVHAIGQARTLARIDKALAFISEREAQQ CCCCCCCEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKIKTRFAPSPTGYLHVGGARTALYSWLFSRHLGGEFVLRIEDTDLGRSTQEAIDAIMDG CCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCC MNWLNLDWDEGPYFQTKRFDRYNAVIDQMLDAGTAYRCYCSKERLEALREAQMANGEKPR CCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCCCC YDGHCRDSQCTHGADEPSVVRFRNPQEGSVIFDDKIRGPIEFSNQELDDLIIRRTDGSPT CCCCCCCCCCCCCCCCCCEEEECCCCCCCEEECCCCCCCCCCCCCCCCHHEEEECCCCCC YNFCVVIDDWDMEITHVIRGEDHINNTPRQINILKALGAPVPEYAHVSMILGDDGKKLSK EEEEEEEECCCCEEEEEECCCHHCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHH RHGAVGVMQYRDDGYLPEALLNYLVRLGWSHGDQEIFSIEEMTQLFTLDAVSKSASAFNT HCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH EKLQWLNHHYINSLPPEQVAVHLSWHVEQLGIDTRNGPELVEIVKLLGERCKTLKEMAES HHHHHHHHHHCCCCCHHHEEEEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH CRYFYEEFDAFDVDAAKKHLRPIARQPLEAVKVKLAAITEWTTENVHNAIQGTADELGVG HHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC MGKVGMPLRVAVTGVGQSPGMDVTVHAIGQARTLARIDKALAFISEREAQQ CCCCCCCEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA