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The map label for this gene is napF [H]

Identifier: 218930018

GI number: 218930018

Start: 3317750

End: 3318319

Strand: Direct

Name: napF [H]

Synonym: YPO2969

Alternate gene names: 218930018

Gene position: 3317750-3318319 (Clockwise)

Preceding gene: 218930017

Following gene: 218930022

Centisome position: 71.29

GC content: 52.28

Gene sequence:

>570_bases
GTGACAAAAAATAAATCAGTGGCCAGAGACGAACGTTACTATAAAGCTTATCTGGAAAGCCGGACGATCAGCCGCCGGGG
GCTATTTCGTGGCTTGCTGAAAGGCGTGCAGCCCAGCACCACAACCGCGCCCTCTGACATCACCGCCCCTCCTCCCCTCC
GGCCGCCATATGCTATTGACGAGCCACATTTTCAACAGAGCTGTACCGGGTGCGGTGTCTGTGTGGCGGCCTGCGAGGAA
AATCTGATTGTGATGGTCAATCAAAGGCCTGCGTTAAATTTCTCGACGCCCTATTTCTCGACACCCTATTGTAGCCGCTG
TCAGGCTTGCAGCACCGCCTGCCAAACAGGCGCATTATCATCAGCCGAGTTCCATATTGCCGCCCGACCATCAGTAAAAA
ACATCTGTCAAAATACCTATATTTACTGTGATAGCTGCGCCGATTATTGTGAGAAGCAGGCCCTGATCTGGCAAGCCAAC
CAACCGCCCACACTGGTTACTGAGCTATGTGATGGCTGTGGTGAATGCGTTTTCAGGTGCCCAGCAAGGATATTAGAGAT
GCAGATATAG

Upstream 100 bases:

>100_bases
AATACCCGGTTTATCCCTTACTGGCCAAAATAGCGGCTTGCTACCTGAAAACCTTGCAAACAGAGTTGGTATTATCTCCT
CTGCCCCGTGAGCTATATCG

Downstream 100 bases:

>100_bases
CGGGTAATTACATCAATAAAAAACTGCACCTTATTCAGTTGGGTATCCAACTTTTGGGGTGCAGCCCAGTGATTGAGGTA
TGAGATTGATGACAAAGCGA

Product: putative iron-sulphur protein

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MTKNKSVARDERYYKAYLESRTISRRGLFRGLLKGVQPSTTTAPSDITAPPPLRPPYAIDEPHFQQSCTGCGVCVAACEE
NLIVMVNQRPALNFSTPYFSTPYCSRCQACSTACQTGALSSAEFHIAARPSVKNICQNTYIYCDSCADYCEKQALIWQAN
QPPTLVTELCDGCGECVFRCPARILEMQI

Sequences:

>Translated_189_residues
MTKNKSVARDERYYKAYLESRTISRRGLFRGLLKGVQPSTTTAPSDITAPPPLRPPYAIDEPHFQQSCTGCGVCVAACEE
NLIVMVNQRPALNFSTPYFSTPYCSRCQACSTACQTGALSSAEFHIAARPSVKNICQNTYIYCDSCADYCEKQALIWQAN
QPPTLVTELCDGCGECVFRCPARILEMQI
>Mature_188_residues
TKNKSVARDERYYKAYLESRTISRRGLFRGLLKGVQPSTTTAPSDITAPPPLRPPYAIDEPHFQQSCTGCGVCVAACEEN
LIVMVNQRPALNFSTPYFSTPYCSRCQACSTACQTGALSSAEFHIAARPSVKNICQNTYIYCDSCADYCEKQALIWQANQ
PPTLVTELCDGCGECVFRCPARILEMQI

Specific function: Involved in electron transfer [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788536, Length=173, Percent_Identity=31.2138728323699, Blast_Score=71, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004496 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 20916; Mature: 20785

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
10.1 %Cys+Met (Translated Protein)
8.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
9.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKNKSVARDERYYKAYLESRTISRRGLFRGLLKGVQPSTTTAPSDITAPPPLRPPYAID
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
EPHFQQSCTGCGVCVAACEENLIVMVNQRPALNFSTPYFSTPYCSRCQACSTACQTGALS
CCCHHHHCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
SAEFHIAARPSVKNICQNTYIYCDSCADYCEKQALIWQANQPPTLVTELCDGCGECVFRC
CCCEEEEECCHHHHHHHCCCEEEHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHH
PARILEMQI
HHHHHHCCC
>Mature Secondary Structure 
TKNKSVARDERYYKAYLESRTISRRGLFRGLLKGVQPSTTTAPSDITAPPPLRPPYAID
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
EPHFQQSCTGCGVCVAACEENLIVMVNQRPALNFSTPYFSTPYCSRCQACSTACQTGALS
CCCHHHHCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
SAEFHIAARPSVKNICQNTYIYCDSCADYCEKQALIWQANQPPTLVTELCDGCGECVFRC
CCCEEEEECCHHHHHHHCCCEEEHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHH
PARILEMQI
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]