Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is 218929885
Identifier: 218929885
GI number: 218929885
Start: 3149886
End: 3150224
Strand: Direct
Name: 218929885
Synonym: YPO2820
Alternate gene names: NA
Gene position: 3149886-3150224 (Clockwise)
Preceding gene: 218929884
Following gene: 218929886
Centisome position: 67.69
GC content: 43.36
Gene sequence:
>339_bases ATGATCACACATTCGCCACATACTATTGCTAGCAGAACCGAGTGTATTGGGTGTTTTACCGTACCTGGTGTTTTGGGTGG CTTTGAAGTGAGAAGCATGAAGAATCGTAAAGAACGTCCCCTCTTGATGGTCGTTCGTACCGGCTGGGAAAAAGCCGCTG CCTATGAACAAATTCGCCCAGTATCTGAAATCGTTATTGAGAAAAACGGTCAGTCTCGTCCAGTTAACCAAGCTTTTTTC TGGAATGATTTGCAGGATACCTCTATCGATTTCTCACAAAAGGCGGTTGATTTGTTCTTCAGTAAGAAAGGAACTCTATC TGCATGTCACCCAATTTAA
Upstream 100 bases:
>100_bases AACGTGCTGACACCGTGAGATATCAGTAGGCGCTGGTGGACGTTCGGCCTCTTTACGCTTAAACTATAACCACTTAATTC TCACTGTTTGGGGCCTGAGT
Downstream 100 bases:
>100_bases TTGCTGAACACGATAAAATATTAAAATGGCCGGAAGTTAATGATTTAGCTTACGGCCATTTTTTATGGCTCCCTGAATTT AAAACCCCCGAGTGGTGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MITHSPHTIASRTECIGCFTVPGVLGGFEVRSMKNRKERPLLMVVRTGWEKAAAYEQIRPVSEIVIEKNGQSRPVNQAFF WNDLQDTSIDFSQKAVDLFFSKKGTLSACHPI
Sequences:
>Translated_112_residues MITHSPHTIASRTECIGCFTVPGVLGGFEVRSMKNRKERPLLMVVRTGWEKAAAYEQIRPVSEIVIEKNGQSRPVNQAFF WNDLQDTSIDFSQKAVDLFFSKKGTLSACHPI >Mature_112_residues MITHSPHTIASRTECIGCFTVPGVLGGFEVRSMKNRKERPLLMVVRTGWEKAAAYEQIRPVSEIVIEKNGQSRPVNQAFF WNDLQDTSIDFSQKAVDLFFSKKGTLSACHPI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12598; Mature: 12598
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITHSPHTIASRTECIGCFTVPGVLGGFEVRSMKNRKERPLLMVVRTGWEKAAAYEQIRP CCCCCCCCCCCCCCEEEEEECCCHHCCHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCC VSEIVIEKNGQSRPVNQAFFWNDLQDTSIDFSQKAVDLFFSKKGTLSACHPI HHHHEECCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MITHSPHTIASRTECIGCFTVPGVLGGFEVRSMKNRKERPLLMVVRTGWEKAAAYEQIRP CCCCCCCCCCCCCCEEEEEECCCHHCCHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCC VSEIVIEKNGQSRPVNQAFFWNDLQDTSIDFSQKAVDLFFSKKGTLSACHPI HHHHEECCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA