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The map label for this gene is int [H]

Identifier: 218929884

GI number: 218929884

Start: 3149504

End: 3149803

Strand: Direct

Name: int [H]

Synonym: YPO2819

Alternate gene names: 218929884

Gene position: 3149504-3149803 (Clockwise)

Preceding gene: 218929875

Following gene: 218929885

Centisome position: 67.68

GC content: 50.0

Gene sequence:

>300_bases
CAGAGGAAAGCAAATCAGGCAATTGGCGTCGCTCTCAACGACACCGCATGCCGGTTATTACGGGACCAGAGCGGCAATCA
CAAAAAATGGGTGTTTGTTCATCGAAAAGAAAGCACGTTACCCAGCGGGAAAAAATCAGCCGCAGTGAGGAAAGTGCGCG
TTAATGGTAACACAGCATGGAGGCTTGCATTAAAGAGAGCTGGAATCGATAACTTCCGCTTTCACGACCTTCGACACACA
TGGGCAAGTTGGTTAGTTCAGGCTGGAGTTCAGCGGGTAGATAACGTGCTGACACCGTGA

Upstream 100 bases:

>100_bases
TAAATTAACTGCATTCAATGCTACCAGCCCTTGCTATGAGAGGATACCTTGATATTTAAAATAATCGAAAAGTGAGTTTG
ATAACGTTAAATTTCGCCCT

Downstream 100 bases:

>100_bases
GATATCAGTAGGCGCTGGTGGACGTTCGGCCTCTTTACGCTTAAACTATAACCACTTAATTCTCACTGTTTGGGGCCTGA
GTATGATCACACATTCGCCA

Product: phage integrase (partial)

Products: NA

Alternate protein names: Prophage QSR' integrase [H]

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
QRKANQAIGVALNDTACRLLRDQSGNHKKWVFVHRKESTLPSGKKSAAVRKVRVNGNTAWRLALKRAGIDNFRFHDLRHT
WASWLVQAGVQRVDNVLTP

Sequences:

>Translated_99_residues
QRKANQAIGVALNDTACRLLRDQSGNHKKWVFVHRKESTLPSGKKSAAVRKVRVNGNTAWRLALKRAGIDNFRFHDLRHT
WASWLVQAGVQRVDNVLTP
>Mature_99_residues
QRKANQAIGVALNDTACRLLRDQSGNHKKWVFVHRKESTLPSGKKSAAVRKVRVNGNTAWRLALKRAGIDNFRFHDLRHT
WASWLVQAGVQRVDNVLTP

Specific function: Integrase from the cryptic lambdoic prophage DLP12. Integrase is necessary for integration of the phage into the host genome by site-specific recombination. In conjunction with excisionase, integrase is also necessary for excision of the prophage from the

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI1786748, Length=90, Percent_Identity=62.2222222222222, Blast_Score=126, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 11239; Mature: 11239

Theoretical pI: Translated: 12.14; Mature: 12.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
QRKANQAIGVALNDTACRLLRDQSGNHKKWVFVHRKESTLPSGKKSAAVRKVRVNGNTAW
CCCCCCEEEEEECHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCEE
RLALKRAGIDNFRFHDLRHTWASWLVQAGVQRVDNVLTP
EEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2553674; 2183007; 9278503 [H]