Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is yccK [H]
Identifier: 218929872
GI number: 218929872
Start: 3138485
End: 3139474
Strand: Direct
Name: yccK [H]
Synonym: YPO2806
Alternate gene names: 218929872
Gene position: 3138485-3139474 (Clockwise)
Preceding gene: 218929871
Following gene: 218929874
Centisome position: 67.44
GC content: 52.63
Gene sequence:
>990_bases ATGCAAAAACGTTATCTCGGTAAATCCGGACTTGAAGTATCGGCACTGGGTCTGGGCTGTATGGGGCTGAGCTATGGCTA CGGCCCAGCAACAGATACTCGTCAGGCCGTCGAACTGATCCGCGCGGCCGTTGAGCGTGGTGTGACATTTTTCGATACCG CCGAAGTGTATGGCCCTTATCTGAATGAAGAGGTTGTCGGCGAAGCCTTAAAACCCTTTCGCGACCAAGTCGTTATTGCC ACCAAATTTGGTTTTACCTTCGGTGAAGACAATAAACAGCAGATTTTAAACAGCCGCCCAGAGCATATCCGCGAAGCGGT GGAAGGATCACTGCGTCGACTCAAAACTGACGTGATTGACCTGTTGTATCAACACCGCGTCGACCCTGATGTTCCCATTG AAGACGTTGCGGGTACCGTGAAAGACTTGATTGCTGAAGGCAAGGTCAAACATTTCGGGCTTTCCGAAGCCGGTGCACAA ACTATTCGTCGTGCGCATGCTATACAGCCGGTTGCCGCGCTGCAGAGCGAATACTCAATGTGGTGGCGTGAACCTGAACA GGAGATCCTGCCGCTGCTGGAGGAACTGGGTATTGGCTTTGTGCCGTTCAGCCCGTTAGGTAAAGGCTTCCTGACCGGGG CCATCAAGGCCGGAGCGACATTCGGTGAGGATGACTTCCGAAGCAAAGTGCCACGTTTTGCCGCAGAGGCTCTTGAAGCC AATGAAAGGCTCGTGGCCTTGCTGGGTATTCTTGCCGCAGAAAAAGGCGTGACGTCAGCACAAATTGCTCTGGCATGGTT GTTGGCACAAAAACCTTGGATTGTGCCAATCCCCGGAACCACAAAACTGCATAGGCTGGAGGAGAACCTGGGGGCTGCAG ATATTACCCTTTCTCAGGATGATATCTGGAATATTACTCAGGCACTTGCAACGGTGAAAATTGTGGGAGAGCGTTATCCT GCGGCCATGCAGGCTCGAGTGGGTCGTTAA
Upstream 100 bases:
>100_bases GCAACGAGCGCCTTCTTCTCACATCGCGACCCGGCAATGGTGGAATGGCTGACTGGCCGTAAACTTGATGTCTAAGCCGC TATAGAAGAGGAGATTATTG
Downstream 100 bases:
>100_bases TACTTAATTGTAGTCGCTCAAATTTCATCTGGCTTACGATAATCCGTAAGCCAGTTAATCCGAATAACGCAGTGCATCTA TCATAAGCGCAAAAACAGGT
Product: putative aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MQKRYLGKSGLEVSALGLGCMGLSYGYGPATDTRQAVELIRAAVERGVTFFDTAEVYGPYLNEEVVGEALKPFRDQVVIA TKFGFTFGEDNKQQILNSRPEHIREAVEGSLRRLKTDVIDLLYQHRVDPDVPIEDVAGTVKDLIAEGKVKHFGLSEAGAQ TIRRAHAIQPVAALQSEYSMWWREPEQEILPLLEELGIGFVPFSPLGKGFLTGAIKAGATFGEDDFRSKVPRFAAEALEA NERLVALLGILAAEKGVTSAQIALAWLLAQKPWIVPIPGTTKLHRLEENLGAADITLSQDDIWNITQALATVKIVGERYP AAMQARVGR
Sequences:
>Translated_329_residues MQKRYLGKSGLEVSALGLGCMGLSYGYGPATDTRQAVELIRAAVERGVTFFDTAEVYGPYLNEEVVGEALKPFRDQVVIA TKFGFTFGEDNKQQILNSRPEHIREAVEGSLRRLKTDVIDLLYQHRVDPDVPIEDVAGTVKDLIAEGKVKHFGLSEAGAQ TIRRAHAIQPVAALQSEYSMWWREPEQEILPLLEELGIGFVPFSPLGKGFLTGAIKAGATFGEDDFRSKVPRFAAEALEA NERLVALLGILAAEKGVTSAQIALAWLLAQKPWIVPIPGTTKLHRLEENLGAADITLSQDDIWNITQALATVKIVGERYP AAMQARVGR >Mature_329_residues MQKRYLGKSGLEVSALGLGCMGLSYGYGPATDTRQAVELIRAAVERGVTFFDTAEVYGPYLNEEVVGEALKPFRDQVVIA TKFGFTFGEDNKQQILNSRPEHIREAVEGSLRRLKTDVIDLLYQHRVDPDVPIEDVAGTVKDLIAEGKVKHFGLSEAGAQ TIRRAHAIQPVAALQSEYSMWWREPEQEILPLLEELGIGFVPFSPLGKGFLTGAIKAGATFGEDDFRSKVPRFAAEALEA NERLVALLGILAAEKGVTSAQIALAWLLAQKPWIVPIPGTTKLHRLEENLGAADITLSQDDIWNITQALATVKIVGERYP AAMQARVGR
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436971, Length=317, Percent_Identity=30.9148264984227, Blast_Score=122, Evalue=4e-28, Organism=Homo sapiens, GI27436969, Length=312, Percent_Identity=31.4102564102564, Blast_Score=122, Evalue=4e-28, Organism=Homo sapiens, GI4504825, Length=309, Percent_Identity=31.3915857605178, Blast_Score=122, Evalue=4e-28, Organism=Homo sapiens, GI27436964, Length=309, Percent_Identity=30.0970873786408, Blast_Score=122, Evalue=6e-28, Organism=Homo sapiens, GI27436966, Length=309, Percent_Identity=30.0970873786408, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI27436962, Length=309, Percent_Identity=30.0970873786408, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI223718702, Length=295, Percent_Identity=28.4745762711864, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI41152114, Length=296, Percent_Identity=29.7297297297297, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI41327764, Length=280, Percent_Identity=30, Blast_Score=75, Evalue=9e-14, Organism=Escherichia coli, GI87081735, Length=333, Percent_Identity=33.3333333333333, Blast_Score=159, Evalue=2e-40, Organism=Escherichia coli, GI1789375, Length=331, Percent_Identity=29.607250755287, Blast_Score=131, Evalue=6e-32, Organism=Escherichia coli, GI1787674, Length=298, Percent_Identity=32.2147651006711, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1788070, Length=317, Percent_Identity=32.4921135646688, Blast_Score=126, Evalue=2e-30, Organism=Escherichia coli, GI1789199, Length=338, Percent_Identity=26.9230769230769, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1788081, Length=306, Percent_Identity=25.8169934640523, Blast_Score=88, Evalue=8e-19, Organism=Escherichia coli, GI48994888, Length=292, Percent_Identity=28.7671232876712, Blast_Score=84, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6325169, Length=331, Percent_Identity=28.7009063444109, Blast_Score=129, Evalue=7e-31, Organism=Saccharomyces cerevisiae, GI6323998, Length=319, Percent_Identity=29.7805642633229, Blast_Score=109, Evalue=7e-25, Organism=Saccharomyces cerevisiae, GI6319951, Length=319, Percent_Identity=28.8401253918495, Blast_Score=107, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6325384, Length=349, Percent_Identity=27.7936962750716, Blast_Score=106, Evalue=4e-24, Organism=Saccharomyces cerevisiae, GI6319958, Length=287, Percent_Identity=27.5261324041812, Blast_Score=104, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6322615, Length=248, Percent_Identity=27.8225806451613, Blast_Score=93, Evalue=6e-20, Organism=Saccharomyces cerevisiae, GI6321052, Length=156, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24640980, Length=321, Percent_Identity=28.0373831775701, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI45549126, Length=321, Percent_Identity=27.7258566978193, Blast_Score=92, Evalue=5e-19, Organism=Drosophila melanogaster, GI24646155, Length=160, Percent_Identity=34.375, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI24646159, Length=223, Percent_Identity=26.0089686098655, Blast_Score=72, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 36037; Mature: 36037
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKRYLGKSGLEVSALGLGCMGLSYGYGPATDTRQAVELIRAAVERGVTFFDTAEVYGPY CCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEHHHHHCCC LNEEVVGEALKPFRDQVVIATKFGFTFGEDNKQQILNSRPEHIREAVEGSLRRLKTDVID CCHHHHHHHHHHHHHCEEEEEECCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LLYQHRVDPDVPIEDVAGTVKDLIAEGKVKHFGLSEAGAQTIRRAHAIQPVAALQSEYSM HHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH WWREPEQEILPLLEELGIGFVPFSPLGKGFLTGAIKAGATFGEDDFRSKVPRFAAEALEA HHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH NERLVALLGILAAEKGVTSAQIALAWLLAQKPWIVPIPGTTKLHRLEENLGAADITLSQD HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCEEEECCC DIWNITQALATVKIVGERYPAAMQARVGR HHHHHHHHHHHHHHHHHHCCHHHHHHCCC >Mature Secondary Structure MQKRYLGKSGLEVSALGLGCMGLSYGYGPATDTRQAVELIRAAVERGVTFFDTAEVYGPY CCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEHHHHHCCC LNEEVVGEALKPFRDQVVIATKFGFTFGEDNKQQILNSRPEHIREAVEGSLRRLKTDVID CCHHHHHHHHHHHHHCEEEEEECCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LLYQHRVDPDVPIEDVAGTVKDLIAEGKVKHFGLSEAGAQTIRRAHAIQPVAALQSEYSM HHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH WWREPEQEILPLLEELGIGFVPFSPLGKGFLTGAIKAGATFGEDDFRSKVPRFAAEALEA HHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH NERLVALLGILAAEKGVTSAQIALAWLLAQKPWIVPIPGTTKLHRLEENLGAADITLSQD HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCEEEECCC DIWNITQALATVKIVGERYPAAMQARVGR HHHHHHHHHHHHHHHHHHCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377; 9106203 [H]