Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is 218929864
Identifier: 218929864
GI number: 218929864
Start: 3127515
End: 3128096
Strand: Direct
Name: 218929864
Synonym: YPO2797
Alternate gene names: NA
Gene position: 3127515-3128096 (Clockwise)
Preceding gene: 218929863
Following gene: 218929867
Centisome position: 67.2
GC content: 50.0
Gene sequence:
>582_bases ATGCTAAACACAGACGCACGGCAACAACTTCGCAAACTCCTGCCATTGGAGATGGTAGCGACTAAACAGTGGTTACTTGA CCAAGGGTTGAGTCTGCACTTTTTGGACAATGCCGTGCGCAGCTCAACCCTACTGCCGCTTACCGCCGGGGTGTATTGCC TGCTAGAGGCCAGAGTCAGTTGGCAAGGCGTTGTTGCGTCACTACAAAGGATGTCTGAGCAACCTATACATGTCGGTGGC CTGACAGCTTTAGAGTTGGCCGGATTAGGACACTACCTCTCTAAAGGCGCTGAGCAGCATATTCATCTCTGGTCAGAGGC GGCTCTGCCAACATGGCTGAATAGAGTACCACTTAACGCTAAATTCAAATGGCATGGTACCCATCGCCTGTGGCCGAAAA TGACAATGGATGATCCCAGATTCCTTAACGAAGAAACCTGGCGCGAGGAGCTACCGCCAGTGACATTTTCTTGCCCAGAA AAAGCTATATTTGAGACGCTGGTCGATGTACCGAAAGCGATCAGCTTTGAGCATGCCGATGAATTAATGCAGGGATTACA CAACCTGTCACCCATTATTTAG
Upstream 100 bases:
>100_bases TTGACGTATATACTTGCTTTTACAAACCAACCTTCATCAATAGTTTGATAATTTCAGTAAATACGGCAGTAATCACCGTA TAAAGGAGATTTATTAAACC
Downstream 100 bases:
>100_bases GGTATATAGCGCTATTATTCGTTGAAGAACCAATAGCCCTGATTAATCAATTCGGTTAATTCCGTGACGAAAGCCGAATC CTGTAGTGCCTCGCCCAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MLNTDARQQLRKLLPLEMVATKQWLLDQGLSLHFLDNAVRSSTLLPLTAGVYCLLEARVSWQGVVASLQRMSEQPIHVGG LTALELAGLGHYLSKGAEQHIHLWSEAALPTWLNRVPLNAKFKWHGTHRLWPKMTMDDPRFLNEETWREELPPVTFSCPE KAIFETLVDVPKAISFEHADELMQGLHNLSPII
Sequences:
>Translated_193_residues MLNTDARQQLRKLLPLEMVATKQWLLDQGLSLHFLDNAVRSSTLLPLTAGVYCLLEARVSWQGVVASLQRMSEQPIHVGG LTALELAGLGHYLSKGAEQHIHLWSEAALPTWLNRVPLNAKFKWHGTHRLWPKMTMDDPRFLNEETWREELPPVTFSCPE KAIFETLVDVPKAISFEHADELMQGLHNLSPII >Mature_193_residues MLNTDARQQLRKLLPLEMVATKQWLLDQGLSLHFLDNAVRSSTLLPLTAGVYCLLEARVSWQGVVASLQRMSEQPIHVGG LTALELAGLGHYLSKGAEQHIHLWSEAALPTWLNRVPLNAKFKWHGTHRLWPKMTMDDPRFLNEETWREELPPVTFSCPE KAIFETLVDVPKAISFEHADELMQGLHNLSPII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21904; Mature: 21904
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNTDARQQLRKLLPLEMVATKQWLLDQGLSLHFLDNAVRSSTLLPLTAGVYCLLEARVS CCCHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHH WQGVVASLQRMSEQPIHVGGLTALELAGLGHYLSKGAEQHIHLWSEAALPTWLNRVPLNA HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC KFKWHGTHRLWPKMTMDDPRFLNEETWREELPPVTFSCPEKAIFETLVDVPKAISFEHAD EEEECCCCCCCCCCCCCCCHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHH ELMQGLHNLSPII HHHHHHHHCCCCC >Mature Secondary Structure MLNTDARQQLRKLLPLEMVATKQWLLDQGLSLHFLDNAVRSSTLLPLTAGVYCLLEARVS CCCHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHH WQGVVASLQRMSEQPIHVGGLTALELAGLGHYLSKGAEQHIHLWSEAALPTWLNRVPLNA HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC KFKWHGTHRLWPKMTMDDPRFLNEETWREELPPVTFSCPEKAIFETLVDVPKAISFEHAD EEEECCCCCCCCCCCCCCCHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHH ELMQGLHNLSPII HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA