Definition | Yersinia pestis CO92 chromosome, complete genome. |
---|---|
Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is mrpA [H]
Identifier: 218929831
GI number: 218929831
Start: 3092975
End: 3093505
Strand: Direct
Name: mrpA [H]
Synonym: YPO2759
Alternate gene names: 218929831
Gene position: 3092975-3093505 (Clockwise)
Preceding gene: 218929829
Following gene: 218929834
Centisome position: 66.46
GC content: 46.33
Gene sequence:
>531_bases ATGTCTAACTTCAAGAAAAGTGTATTAGTTGCTGCTGTATTGTCTCTTTCTGCCTTCGCTGCTAATGCTGCTGACCAAGG TAAGGGTAAAGTGACTTTTACCGGTTCTATCATTGAAGCACCTTGTTCAATTACTTCCGAAGCGGCTGATCAGGTTGTTG AACTGGGCCAAATTTCTACTACATCACTGGCTAACATGGGCTCTTCTGAACCACGTAGTTTCAGCATTGGTCTGGAGAAA TGTGATGTGGCTACGATGAAGAATGTGTCTGTCACCTTTGATGGTACACCCGATGGTGTGGATGCTGAGATGTTGAAACT GATTGGTTTGGCTGATGGTGCAGGTATTGTGATCACCGATGAAGCGGGTGCGACAATTAAACGTGGTGTGGCGTCGGTGG GCAAGACCCTGGATCAGGGCAGTAACAGCTTGAAATTCTCTGCTTACCTGAAAGGTACCAGTGCAGATGAAGGTAGTGTA GTCCCCGGCGAATTCAGCAGCGTAGCTAACTTTACCCTCGCTTATAATTAA
Upstream 100 bases:
>100_bases TTATAATAAGTAGTAAGACGCTTCCGCAGATAAAATATTTTGCGATAATAAGGTCTTTCTATATTAATGAAAAAACTTCA AATTAAATTAAGGTTATATA
Downstream 100 bases:
>100_bases TTACAGATTTTAAGCTGTCTAAATTGCTTAAAAAAAGCATGTGGAAGATATTCTGCATGCTTTTTTATATGCTGTATAAA AGAATGAATTTTTTTAACTT
Product: putative mannose-resistant fimbrial protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MSNFKKSVLVAAVLSLSAFAANAADQGKGKVTFTGSIIEAPCSITSEAADQVVELGQISTTSLANMGSSEPRSFSIGLEK CDVATMKNVSVTFDGTPDGVDAEMLKLIGLADGAGIVITDEAGATIKRGVASVGKTLDQGSNSLKFSAYLKGTSADEGSV VPGEFSSVANFTLAYN
Sequences:
>Translated_176_residues MSNFKKSVLVAAVLSLSAFAANAADQGKGKVTFTGSIIEAPCSITSEAADQVVELGQISTTSLANMGSSEPRSFSIGLEK CDVATMKNVSVTFDGTPDGVDAEMLKLIGLADGAGIVITDEAGATIKRGVASVGKTLDQGSNSLKFSAYLKGTSADEGSV VPGEFSSVANFTLAYN >Mature_175_residues SNFKKSVLVAAVLSLSAFAANAADQGKGKVTFTGSIIEAPCSITSEAADQVVELGQISTTSLANMGSSEPRSFSIGLEKC DVATMKNVSVTFDGTPDGVDAEMLKLIGLADGAGIVITDEAGATIKRGVASVGKTLDQGSNSLKFSAYLKGTSADEGSVV PGEFSSVANFTLAYN
Specific function: Major structural component of mannose-resistant fimbriae of Serratia marcescens [H]
COG id: COG3539
COG function: function code NU; P pilus assembly protein, pilin FimA
Gene ontology:
Cell location: Fimbrium [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fimbrial protein family [H]
Homologues:
Organism=Escherichia coli, GI1786938, Length=184, Percent_Identity=31.5217391304348, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI87081805, Length=153, Percent_Identity=34.640522875817, Blast_Score=71, Evalue=3e-14, Organism=Escherichia coli, GI1789422, Length=189, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=1e-13, Organism=Escherichia coli, GI87082421, Length=179, Percent_Identity=31.2849162011173, Blast_Score=66, Evalue=1e-12, Organism=Escherichia coli, GI87081753, Length=155, Percent_Identity=32.9032258064516, Blast_Score=65, Evalue=2e-12, Organism=Escherichia coli, GI1790769, Length=130, Percent_Identity=33.8461538461538, Blast_Score=64, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008966 - InterPro: IPR000259 - InterPro: IPR014779 [H]
Pfam domain/function: PF00419 Fimbrial [H]
EC number: NA
Molecular weight: Translated: 17884; Mature: 17753
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNFKKSVLVAAVLSLSAFAANAADQGKGKVTFTGSIIEAPCSITSEAADQVVELGQIST CCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEECCCCCCHHHHHHHHHHCCCCH TSLANMGSSEPRSFSIGLEKCDVATMKNVSVTFDGTPDGVDAEMLKLIGLADGAGIVITD HHHHHCCCCCCCEEECCCCCCCCEEECCEEEEECCCCCCCCHHHHHHHHCCCCCCEEEEC EAGATIKRGVASVGKTLDQGSNSLKFSAYLKGTSADEGSVVPGEFSSVANFTLAYN CCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure SNFKKSVLVAAVLSLSAFAANAADQGKGKVTFTGSIIEAPCSITSEAADQVVELGQIST CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEECCCCCCHHHHHHHHHHCCCCH TSLANMGSSEPRSFSIGLEKCDVATMKNVSVTFDGTPDGVDAEMLKLIGLADGAGIVITD HHHHHCCCCCCCEEECCCCCCCCEEECCEEEEECCCCCCCCHHHHHHHHCCCCCCEEEEC EAGATIKRGVASVGKTLDQGSNSLKFSAYLKGTSADEGSVVPGEFSSVANFTLAYN CCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2900238 [H]