| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is ybgA [H]
Identifier: 218929767
GI number: 218929767
Start: 3022008
End: 3022490
Strand: Direct
Name: ybgA [H]
Synonym: YPO2694
Alternate gene names: 218929767
Gene position: 3022008-3022490 (Clockwise)
Preceding gene: 218929766
Following gene: 218929768
Centisome position: 64.94
GC content: 47.83
Gene sequence:
>483_bases ATGCCGGGAACCGATCGGGCAGTTCACAGTAAAGAATATCGCTATGCGTGTGAGGAACTTGATGTTTTGTGTCGCGCTGG GGTGACCCGTGGCGGGTTGATGGATTTTCATCGTCGCTATAAGTTGGTCTTACTGGCGCATTCTCAGCCTGAATACCGTG AAATCGGTCCTTTTATTGCGGCAATCAGCAACTGGTCATCCTTGAGCGAATTTACGGCTGAATATCGTCGGCGCTTACTG CATTTACTTTCTCACTTGCCCACGGTAGCCAATCACACCAATGTGTTAATGCACGTACAGGGCTATTTTCGCCCTTATCT CAGTTCAGCTCAGCGTCAGGCATTGGCACAGCTTATTGAGCAATACCGTTTAGGCAATCAGCCTCTGCAGGCTCCCATTG CACAAATCACCGAGTATCTGGCTGAGTTCCCCAATGATTATCTGGCTCAGCAGCGCTATTTTTCTTTTTATTTACAAGAT TAA
Upstream 100 bases:
>100_bases CTGTTATGATGAAAACGATTCTGATGACCAAAGTATCTGATGACCAAGTACCTGATGATCAAGTATCTGATGATCAAAGT AACCGCAGAGGGAGGATGTC
Downstream 100 bases:
>100_bases GTACCCAGTTATGTACAGGATTAAGTATTAAGTTACGCACAGGATTAAGTACCAAGCAGGCCGTTGTCTGGTGGTTGAAT GAAATTTAACCCTGAAGACG
Product: hypothetical protein
Products: NA
Alternate protein names: ORF169; TKP [H]
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MPGTDRAVHSKEYRYACEELDVLCRAGVTRGGLMDFHRRYKLVLLAHSQPEYREIGPFIAAISNWSSLSEFTAEYRRRLL HLLSHLPTVANHTNVLMHVQGYFRPYLSSAQRQALAQLIEQYRLGNQPLQAPIAQITEYLAEFPNDYLAQQRYFSFYLQD
Sequences:
>Translated_160_residues MPGTDRAVHSKEYRYACEELDVLCRAGVTRGGLMDFHRRYKLVLLAHSQPEYREIGPFIAAISNWSSLSEFTAEYRRRLL HLLSHLPTVANHTNVLMHVQGYFRPYLSSAQRQALAQLIEQYRLGNQPLQAPIAQITEYLAEFPNDYLAQQRYFSFYLQD >Mature_159_residues PGTDRAVHSKEYRYACEELDVLCRAGVTRGGLMDFHRRYKLVLLAHSQPEYREIGPFIAAISNWSSLSEFTAEYRRRLLH LLSHLPTVANHTNVLMHVQGYFRPYLSSAQRQALAQLIEQYRLGNQPLQAPIAQITEYLAEFPNDYLAQQRYFSFYLQD
Specific function: Unknown
COG id: COG3272
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786925, Length=143, Percent_Identity=53.8461538461538, Blast_Score=166, Evalue=5e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013560 [H]
Pfam domain/function: PF08349 DUF1722 [H]
EC number: NA
Molecular weight: Translated: 18639; Mature: 18508
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGTDRAVHSKEYRYACEELDVLCRAGVTRGGLMDFHRRYKLVLLAHSQPEYREIGPFIA CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEEECCCCCHHHHHHHHH AISNWSSLSEFTAEYRRRLLHLLSHLPTVANHTNVLMHVQGYFRPYLSSAQRQALAQLIE HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QYRLGNQPLQAPIAQITEYLAEFPNDYLAQQRYFSFYLQD HHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC >Mature Secondary Structure PGTDRAVHSKEYRYACEELDVLCRAGVTRGGLMDFHRRYKLVLLAHSQPEYREIGPFIA CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEEECCCCCHHHHHHHHH AISNWSSLSEFTAEYRRRLLHLLSHLPTVANHTNVLMHVQGYFRPYLSSAQRQALAQLIE HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QYRLGNQPLQAPIAQITEYLAEFPNDYLAQQRYFSFYLQD HHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6325460; 8905232; 9278503; 8387990 [H]