Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is gltJ [H]
Identifier: 218929695
GI number: 218929695
Start: 2935771
End: 2936511
Strand: Reverse
Name: gltJ [H]
Synonym: YPO2614
Alternate gene names: 218929695
Gene position: 2936511-2935771 (Counterclockwise)
Preceding gene: 218929696
Following gene: 218929694
Centisome position: 63.1
GC content: 47.5
Gene sequence:
>741_bases ATGGCAATAGACTGGAACTGGGGCATTTTTTTACAGCCAGCCCCTTTCGGCAATACCACCTATCTCGGTTGGATTTGGTC CGGCTTTCAGGTCACGGTCGCATTATCATTATGTGCTTGGGTGATCGCCTTCTTCGTCGGTTCACTATTTGGTATTTTAA GAACGGTGCCCAACCGAATCCTTTCAGGAATAGGGGCTTGTTACGTTGAATTGTTTCGTAACGTACCACTGATCGTGCAA TTTCTTACCTGGTATCTGGTGGTTCCCGAACTATTGCCAGTGAACCTTGGCACATGGTTTAAAAGTGAACTGGCACCCAA TATACAGTTCTTCCTCTCATCTATGATTTGCCTTGGATTATTCACTGCGGCGCGGGTTTGTGAACAGGTTCGCGCAGGAA TTCAATCACTGCCTCGTGGTCAAAAAGCAGCGGGCCTGGCAATGGGGCTCACCCTCACACAGACTTACCGCTATGTTTTA CTGCCCAATGCATATCGGGTGATTATTCCCCCGATGACCTCAGAAATGCTCAATCTGGTAAAAAACTCCGCAATTGCCTC AACCATCGGGCTAGTCGAAATGGCGGCACAAGCGGGTAAATTGCTGGATTATTCAGCGCATGCCTATGAATCCTTCACCG CCATCACCCTAGGTTATGTACTGATCAATGCCGTGATCATGCTGTTAATGCGCTTAGTTGAAAAGAAAGTGCAATTACCC GGCAATCTGGGGAGTAAATAA
Upstream 100 bases:
>100_bases GTCGTTCCCCACCCCGCATTTTTTTGTCAACCCTCGGGAGCCGAAGGTATTGAATCATCAGTCATCAGGGTGGCTTATCC ATCCTTTAAGGGAGTTTGTT
Downstream 100 bases:
>100_bases TGTACGAATTTGATTGGAGTTCCATCGCCCCCAGCCTGCCCTATCTGCTGCAAGGCTTGATTGTAACTGTCAAAATAACC CTCATCGCCATTGTGTTCGG
Product: putative glutamate/aspartate transport system permease
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MAIDWNWGIFLQPAPFGNTTYLGWIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPNRILSGIGACYVELFRNVPLIVQ FLTWYLVVPELLPVNLGTWFKSELAPNIQFFLSSMICLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLTQTYRYVL LPNAYRVIIPPMTSEMLNLVKNSAIASTIGLVEMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLLMRLVEKKVQLP GNLGSK
Sequences:
>Translated_246_residues MAIDWNWGIFLQPAPFGNTTYLGWIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPNRILSGIGACYVELFRNVPLIVQ FLTWYLVVPELLPVNLGTWFKSELAPNIQFFLSSMICLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLTQTYRYVL LPNAYRVIIPPMTSEMLNLVKNSAIASTIGLVEMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLLMRLVEKKVQLP GNLGSK >Mature_245_residues AIDWNWGIFLQPAPFGNTTYLGWIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPNRILSGIGACYVELFRNVPLIVQF LTWYLVVPELLPVNLGTWFKSELAPNIQFFLSSMICLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLTQTYRYVLL PNAYRVIIPPMTSEMLNLVKNSAIASTIGLVEMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLLMRLVEKKVQLPG NLGSK
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786874, Length=246, Percent_Identity=84.9593495934959, Blast_Score=436, Evalue=1e-124, Organism=Escherichia coli, GI1786873, Length=215, Percent_Identity=26.5116279069767, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI48994930, Length=125, Percent_Identity=39.2, Blast_Score=94, Evalue=7e-21, Organism=Escherichia coli, GI1788226, Length=216, Percent_Identity=29.6296296296296, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1787030, Length=213, Percent_Identity=24.8826291079812, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI1788645, Length=221, Percent_Identity=28.5067873303167, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1787086, Length=222, Percent_Identity=26.1261261261261, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI87082239, Length=170, Percent_Identity=28.2352941176471, Blast_Score=65, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 27117; Mature: 26985
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIDWNWGIFLQPAPFGNTTYLGWIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPNRI CEEECCCCEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSGIGACYVELFRNVPLIVQFLTWYLVVPELLPVNLGTWFKSELAPNIQFFLSSMICLGL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHH FTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLTQTYRYVLLPNAYRVIIPPMTSEMLNLV HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEECCCCCEEEECCHHHHHHHHH KNSAIASTIGLVEMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLLMRLVEKKVQLP HHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GNLGSK CCCCCC >Mature Secondary Structure AIDWNWGIFLQPAPFGNTTYLGWIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPNRI EEECCCCEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSGIGACYVELFRNVPLIVQFLTWYLVVPELLPVNLGTWFKSELAPNIQFFLSSMICLGL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHH FTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLTQTYRYVLLPNAYRVIIPPMTSEMLNLV HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEECCCCCEEEECCHHHHHHHHH KNSAIASTIGLVEMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLLMRLVEKKVQLP HHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GNLGSK CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]