| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is yfbR [C]
Identifier: 218929645
GI number: 218929645
Start: 2874174
End: 2874767
Strand: Direct
Name: yfbR [C]
Synonym: YPO2559
Alternate gene names: 218929645
Gene position: 2874174-2874767 (Clockwise)
Preceding gene: 218929644
Following gene: 218929651
Centisome position: 61.76
GC content: 43.94
Gene sequence:
>594_bases ATGAGTCACTTCTTCGCTCATCTTTCCCGCCTAAAACTCATCAACCGCTGGCCGCTGATGCGTAACGTTCGCACTGAAAA TGTGTCAGAACACAGCTTGCAGGTCGCATTTGTCGCTCATGCATTGGCCATCATTAAGAACCGTAAATTTAATGGTAATC TTAATGCCGAACGTATCGCCCTACTGGCGATGTATCACGATGCCAGCGAAGTGATTACCGGGGATTTGCCAACACCTATC AAATACCACAATCCCAAAATTGCACATGAATACAAAAAAATAGAGAAAGTTGCTCAACAAAAACTGATCGAAATGCTGCC CAAAGAGTTACAACATGATTTCCGCTGTCTATTGGATGAACATTATTACAGCGAAGAGGAGAAAGCGCTGGTTAAACAAG CCGATGCTCTGTGTGCGTACCTGAAATGTCTGGAGGAATTATCCGCCGGTAATAATGAATTTATTCAGGCTAAAGCCCGG TTGGAGAAGACGTTGGCAATACGCCAAAGCCCAGAGATGGATTACTTTATGGCAGTCTTTGTGCCAAGTTTTAGTTTATC TCTGGATGAAATCAGCCTCGATTCACTGGATTGA
Upstream 100 bases:
>100_bases ACTGGAGCCTGATCCCCCGAACAAGTCAATTAATGTCAACCGAAACCCAATCCGATATGATAGCCGCTGATTCACCGACA GAAAGAAAAGAGAATAAATT
Downstream 100 bases:
>100_bases TCTTTATAGCCTGCTTGTGCAGGCTATAAATTATGACAAGAGATAATTAGCATTTATTTCTGGTAATATTTTCTCTCAGC ACGTTTATAGGATCCACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MSHFFAHLSRLKLINRWPLMRNVRTENVSEHSLQVAFVAHALAIIKNRKFNGNLNAERIALLAMYHDASEVITGDLPTPI KYHNPKIAHEYKKIEKVAQQKLIEMLPKELQHDFRCLLDEHYYSEEEKALVKQADALCAYLKCLEELSAGNNEFIQAKAR LEKTLAIRQSPEMDYFMAVFVPSFSLSLDEISLDSLD
Sequences:
>Translated_197_residues MSHFFAHLSRLKLINRWPLMRNVRTENVSEHSLQVAFVAHALAIIKNRKFNGNLNAERIALLAMYHDASEVITGDLPTPI KYHNPKIAHEYKKIEKVAQQKLIEMLPKELQHDFRCLLDEHYYSEEEKALVKQADALCAYLKCLEELSAGNNEFIQAKAR LEKTLAIRQSPEMDYFMAVFVPSFSLSLDEISLDSLD >Mature_196_residues SHFFAHLSRLKLINRWPLMRNVRTENVSEHSLQVAFVAHALAIIKNRKFNGNLNAERIALLAMYHDASEVITGDLPTPIK YHNPKIAHEYKKIEKVAQQKLIEMLPKELQHDFRCLLDEHYYSEEEKALVKQADALCAYLKCLEELSAGNNEFIQAKARL EKTLAIRQSPEMDYFMAVFVPSFSLSLDEISLDSLD
Specific function: Unknown
COG id: COG1896
COG function: function code R; Predicted hydrolases of HD superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0207 family [H]
Homologues:
Organism=Escherichia coli, GI1788628, Length=194, Percent_Identity=80.4123711340206, Blast_Score=325, Evalue=2e-90,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022971 - InterPro: IPR003607 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22730; Mature: 22598
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHFFAHLSRLKLINRWPLMRNVRTENVSEHSLQVAFVAHALAIIKNRKFNGNLNAERIA CCHHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH LLAMYHDASEVITGDLPTPIKYHNPKIAHEYKKIEKVAQQKLIEMLPKELQHDFRCLLDE HHHHHHCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HYYSEEEKALVKQADALCAYLKCLEELSAGNNEFIQAKARLEKTLAIRQSPEMDYFMAVF HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH VPSFSLSLDEISLDSLD HCCCCCCHHHCCCCCCC >Mature Secondary Structure SHFFAHLSRLKLINRWPLMRNVRTENVSEHSLQVAFVAHALAIIKNRKFNGNLNAERIA CHHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH LLAMYHDASEVITGDLPTPIKYHNPKIAHEYKKIEKVAQQKLIEMLPKELQHDFRCLLDE HHHHHHCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HYYSEEEKALVKQADALCAYLKCLEELSAGNNEFIQAKARLEKTLAIRQSPEMDYFMAVF HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH VPSFSLSLDEISLDSLD HCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA