| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is aat [H]
Identifier: 218929644
GI number: 218929644
Start: 2872809
End: 2874023
Strand: Direct
Name: aat [H]
Synonym: YPO2558
Alternate gene names: 218929644
Gene position: 2872809-2874023 (Clockwise)
Preceding gene: 218929627
Following gene: 218929645
Centisome position: 61.73
GC content: 49.14
Gene sequence:
>1215_bases ATGTCCCCCATTGAGAAATCCAGCAAACTGGACAACGTCTGTTATGACATTCGTGGACCGGTGCTAAAAGAAGCTAAGCG TCTTGAAGAGGAAGGTAACAAGGTTCTGAAACTGAACATCGGCAACCCTGCCCCGTTTGGTTTCGATGCACCCGACGAGA TTCTGGTGGATGTAATCCGTAATTTACCGACCGCACAAGGCTATTGCGACTCCAAAGGCTTGTTTTCGGCACGTAAAGCC ATTATGCAACACTATCAAGCCCGCAATATCCGTGATCTGACGGTCGAGGATATCTACATTGGAAACGGTGTTTCCGAGTT GATCGTTCAATCCATGCAAGCATTACTGAATTTGGGTGATGAAATGCTAGTACCCGCACCGGATTACCCGCTGTGGACAG CTGCCGTGTCGCTCTCAAGTGGTAAAGCGATTCATTATATGTGTGATGAAGAGTCAGGCTGGTTCCCTGATTTGGATGAT ATTCGCAGCAAAATCACTCCGCGTACCCGTGGGATTGTGATTATCAACCCGAATAACCCAACCGGTGCGGTATACAGCAA AGAGCTGCTGTTAGAAATTGTTGAAATTGCTCGCCAGAATGACCTAATTATTTTCGCTGATGAGATCTACGATAAAATTT TGTATGACGATGCTCAGCACCATTCGATCGCCGCATTAGCCCCTGATTTGCTGACCGTTACGTTCAATGGGCTGTCTAAA ACATACCGTGTTGCGGGTTTCCGCCAGGGCTGGATGGTGTTGAACGGGCCGAAAAAGCACGCTAAAGGGTATATTGAAGG CTTGGAAATGCTGGCATCGATGCGTTTGTGCGCCAACGTACCAATGCAGCATGCGATTCAAACCGCCTTGGGCGGCTATC AGAGCATTAGTGAGTTTATCCAACCTGGTGGCCGTTTGTACGAGCAGCGTGATCGGGCCTGGGAGCTTATCAACCAAATC CCCGGTGTTTCCTGTGTGAAACCTCAGGGCGCGTTGTATATGTTCCCACGTATTGATCAGAAACGTTTTAACCTGAAAGA CGACCAGAAGTTGGTATTGGATCTGTTGTTGCAAGAGAAAGTGCTATTGGTGCAAGGTAGCGCCTTTAACTGGCCGTACC CGGACCATGTGCGGATCGTCACGCTGCCACGGGTGGATGAGCTAGAGATGGCGGTGAGGAAGCTGGGGCGGTTCTTAGAG ACGTATCATCAGTAA
Upstream 100 bases:
>100_bases ATGTATAGAACTTCAAAAATCAGTGGCGTCGGAGTACATTGAGCACCTTGCAGTGTTCCACGCTGAGGACACGCTTTTAC CAGCAAAAGGCTCATTTTTT
Downstream 100 bases:
>100_bases TTGTATGATTGGGGGATGAGGGCTGTTGATGAATCACTAAATCATCATCAACTGGAGCCTGATCCCCCGAACAAGTCAAT TAATGTCAACCGAAACCCAA
Product: aminotransferase AlaT
Products: oxaloacetate; L-glutamate
Alternate protein names: NA
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MSPIEKSSKLDNVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPAPFGFDAPDEILVDVIRNLPTAQGYCDSKGLFSARKA IMQHYQARNIRDLTVEDIYIGNGVSELIVQSMQALLNLGDEMLVPAPDYPLWTAAVSLSSGKAIHYMCDEESGWFPDLDD IRSKITPRTRGIVIINPNNPTGAVYSKELLLEIVEIARQNDLIIFADEIYDKILYDDAQHHSIAALAPDLLTVTFNGLSK TYRVAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRLCANVPMQHAIQTALGGYQSISEFIQPGGRLYEQRDRAWELINQI PGVSCVKPQGALYMFPRIDQKRFNLKDDQKLVLDLLLQEKVLLVQGSAFNWPYPDHVRIVTLPRVDELEMAVRKLGRFLE TYHQ
Sequences:
>Translated_404_residues MSPIEKSSKLDNVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPAPFGFDAPDEILVDVIRNLPTAQGYCDSKGLFSARKA IMQHYQARNIRDLTVEDIYIGNGVSELIVQSMQALLNLGDEMLVPAPDYPLWTAAVSLSSGKAIHYMCDEESGWFPDLDD IRSKITPRTRGIVIINPNNPTGAVYSKELLLEIVEIARQNDLIIFADEIYDKILYDDAQHHSIAALAPDLLTVTFNGLSK TYRVAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRLCANVPMQHAIQTALGGYQSISEFIQPGGRLYEQRDRAWELINQI PGVSCVKPQGALYMFPRIDQKRFNLKDDQKLVLDLLLQEKVLLVQGSAFNWPYPDHVRIVTLPRVDELEMAVRKLGRFLE TYHQ >Mature_403_residues SPIEKSSKLDNVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPAPFGFDAPDEILVDVIRNLPTAQGYCDSKGLFSARKAI MQHYQARNIRDLTVEDIYIGNGVSELIVQSMQALLNLGDEMLVPAPDYPLWTAAVSLSSGKAIHYMCDEESGWFPDLDDI RSKITPRTRGIVIINPNNPTGAVYSKELLLEIVEIARQNDLIIFADEIYDKILYDDAQHHSIAALAPDLLTVTFNGLSKT YRVAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRLCANVPMQHAIQTALGGYQSISEFIQPGGRLYEQRDRAWELINQIP GVSCVKPQGALYMFPRIDQKRFNLKDDQKLVLDLLLQEKVLLVQGSAFNWPYPDHVRIVTLPRVDELEMAVRKLGRFLET YHQ
Specific function: Unknown
COG id: COG0436
COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4507369, Length=378, Percent_Identity=27.7777777777778, Blast_Score=142, Evalue=5e-34, Organism=Homo sapiens, GI19263340, Length=473, Percent_Identity=26.215644820296, Blast_Score=129, Evalue=4e-30, Organism=Homo sapiens, GI215599424, Length=347, Percent_Identity=27.6657060518732, Blast_Score=128, Evalue=9e-30, Organism=Homo sapiens, GI4885351, Length=438, Percent_Identity=24.8858447488584, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI95147551, Length=268, Percent_Identity=24.6268656716418, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI169881279, Length=268, Percent_Identity=24.6268656716418, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI56713256, Length=299, Percent_Identity=24.4147157190635, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI56713254, Length=299, Percent_Identity=24.4147157190635, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI169881281, Length=254, Percent_Identity=25.9842519685039, Blast_Score=81, Evalue=2e-15, Organism=Escherichia coli, GI1788627, Length=404, Percent_Identity=89.6039603960396, Blast_Score=768, Evalue=0.0, Organism=Escherichia coli, GI1788722, Length=380, Percent_Identity=26.5789473684211, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1786816, Length=238, Percent_Identity=24.7899159663866, Blast_Score=72, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17567663, Length=370, Percent_Identity=28.3783783783784, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI71981209, Length=464, Percent_Identity=25, Blast_Score=101, Evalue=6e-22, Organism=Caenorhabditis elegans, GI17567369, Length=242, Percent_Identity=28.099173553719, Blast_Score=86, Evalue=4e-17, Organism=Caenorhabditis elegans, GI71994476, Length=211, Percent_Identity=27.4881516587678, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71994472, Length=211, Percent_Identity=27.4881516587678, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71981215, Length=293, Percent_Identity=24.9146757679181, Blast_Score=82, Evalue=7e-16, Organism=Saccharomyces cerevisiae, GI6320317, Length=361, Percent_Identity=28.808864265928, Blast_Score=130, Evalue=4e-31, Organism=Saccharomyces cerevisiae, GI6323118, Length=357, Percent_Identity=28.5714285714286, Blast_Score=127, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6322401, Length=357, Percent_Identity=22.4089635854342, Blast_Score=98, Evalue=2e-21, Organism=Drosophila melanogaster, GI18859735, Length=380, Percent_Identity=26.5789473684211, Blast_Score=155, Evalue=4e-38, Organism=Drosophila melanogaster, GI24641770, Length=483, Percent_Identity=27.1221532091097, Blast_Score=122, Evalue=4e-28, Organism=Drosophila melanogaster, GI24641760, Length=483, Percent_Identity=27.1221532091097, Blast_Score=122, Evalue=4e-28, Organism=Drosophila melanogaster, GI24641768, Length=483, Percent_Identity=27.1221532091097, Blast_Score=122, Evalue=4e-28, Organism=Drosophila melanogaster, GI24641766, Length=483, Percent_Identity=27.1221532091097, Blast_Score=122, Evalue=4e-28, Organism=Drosophila melanogaster, GI24641764, Length=483, Percent_Identity=27.1221532091097, Blast_Score=122, Evalue=4e-28, Organism=Drosophila melanogaster, GI45551451, Length=483, Percent_Identity=27.1221532091097, Blast_Score=122, Evalue=4e-28, Organism=Drosophila melanogaster, GI28573069, Length=323, Percent_Identity=23.8390092879257, Blast_Score=82, Evalue=8e-16, Organism=Drosophila melanogaster, GI24646114, Length=323, Percent_Identity=23.8390092879257, Blast_Score=82, Evalue=8e-16, Organism=Drosophila melanogaster, GI28573067, Length=323, Percent_Identity=23.8390092879257, Blast_Score=82, Evalue=8e-16, Organism=Drosophila melanogaster, GI28573065, Length=323, Percent_Identity=23.8390092879257, Blast_Score=82, Evalue=8e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001176 - InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: 2.6.1.1
Molecular weight: Translated: 45542; Mature: 45411
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPIEKSSKLDNVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPAPFGFDAPDEILVDVIR CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHH NLPTAQGYCDSKGLFSARKAIMQHYQARNIRDLTVEDIYIGNGVSELIVQSMQALLNLGD CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCC EMLVPAPDYPLWTAAVSLSSGKAIHYMCDEESGWFPDLDDIRSKITPRTRGIVIINPNNP CEEECCCCCCHHHHEEECCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEECCCCC TGAVYSKELLLEIVEIARQNDLIIFADEIYDKILYDDAQHHSIAALAPDLLTVTFNGLSK CCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCCCHHHHCCCEEEEEECCCHH TYRVAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRLCANVPMQHAIQTALGGYQSISEFI HHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHH QPGGRLYEQRDRAWELINQIPGVSCVKPQGALYMFPRIDQKRFNLKDDQKLVLDLLLQEK CCCHHHHHHHHHHHHHHHHCCCCEEECCCCCEEECCCCCCHHCCCCCHHHHHHHHHHHCC VLLVQGSAFNWPYPDHVRIVTLPRVDELEMAVRKLGRFLETYHQ EEEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SPIEKSSKLDNVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPAPFGFDAPDEILVDVIR CCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHH NLPTAQGYCDSKGLFSARKAIMQHYQARNIRDLTVEDIYIGNGVSELIVQSMQALLNLGD CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCC EMLVPAPDYPLWTAAVSLSSGKAIHYMCDEESGWFPDLDDIRSKITPRTRGIVIINPNNP CEEECCCCCCHHHHEEECCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEECCCCC TGAVYSKELLLEIVEIARQNDLIIFADEIYDKILYDDAQHHSIAALAPDLLTVTFNGLSK CCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCCCHHHHCCCEEEEEECCCHH TYRVAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRLCANVPMQHAIQTALGGYQSISEFI HHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHH QPGGRLYEQRDRAWELINQIPGVSCVKPQGALYMFPRIDQKRFNLKDDQKLVLDLLLQEK CCCHHHHHHHHHHHHHHHHCCCCEEECCCCCEEECCCCCCHHCCCCCHHHHHHHHHHHCC VLLVQGSAFNWPYPDHVRIVTLPRVDELEMAVRKLGRFLETYHQ EEEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate; 2-oxoglutarate
Specific reaction: L-aspartate + 2-oxoglutarate = oxaloacetate + L-glutamate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]