Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is yihN [H]
Identifier: 218928800
GI number: 218928800
Start: 1898862
End: 1900097
Strand: Reverse
Name: yihN [H]
Synonym: YPO1668
Alternate gene names: 218928800
Gene position: 1900097-1898862 (Counterclockwise)
Preceding gene: 218928801
Following gene: 218928789
Centisome position: 40.83
GC content: 43.53
Gene sequence:
>1236_bases GTGAATAAATGGACAAAGCTTTGCTTCCTCATTTTGGGTGGAGGGACGATTTTCAAACTCTCCAGTATGAAAGATGTGTT TTACATCCCTATGCAACAAGACTGGGGGCTAACGAATACACAGATTGGTTTTGGTTTTACCGTATATGCCATCATTCAGA CCGTTGGCTTATTCAGTTCTCTTTATATTGCTGATCGTTTTTCGAAAAAGATCTTACTGCCCGTAGGGTTGATCGGTGTG GGCCTCTGTGGCGCATACTTAGCCACGCTTCCACCGTTTACCGGTTATCTCATCGCCTTTGGTGCTATGGCATTTTTTGG GGAAGTGGTTTACTGGCCTGTACTGTTGAAAGCAGTAAGGTTGCTGGGAACCAAAGAAGAACAAGGACGCATGTTTGGTT TTCTGGAAGCGGGTCGCGGTGTGATTGATGTACTTATCGCTTCTGGTGCCCTGTTTGTTTTTGTTCAGTTTGGTGAAGGT AAAGCGGGGATGCAGGCCGGGCTAATCTATTACACGATAGCCACGATATTGGTTGGCGTCATTACTTGGTTTATCGTAGA CAGTGATGACAAGATTAAGGTAGATAATGCAGATAAAGTTAATAAACATGTTTTGGCGGGGATCAAAGATGTTATTAAAA GCCCTAACTTGTGGTTGGCTTCTTTCTGTATCTTCTTTGTCTATTCCGCCTATTGCGGCTTAACCTATTTCATACCATTC CTCAAAGATATTTATGGATTGCCAGTCGCTCTTATTGGCGCTTACGGGATCATTAATCAGTACGGTCTCAAAATGGTAGG AGGACCTGTTGGGGGATTCCTCGCTGACAAAGTCGCAAAATCACCGACAGTTTACCTGAAATGGACATTTTTAATTTCGG CCATAGCGATGATCTTATTCATCCAATTACCCCATGATTCGATGAACGTATACTTGGGTATGATGGCAACACTCGGCTTC GGAGCCATTATCTTCTCTCAGCGCGCAATCTTCTTCGCCCCGATGGATGAAATTGGTACTTCTCGTGAACATGCAGGTTC GGCAATGGCCTTCGGGTGTATTATCGGCTATATGCCGTCCATGTTTGCCTACGCACTTTATGGCTCATTATTAGATAATT TTGAGGGGATTCAGGGGTACAACTACATATTTTCACTCATGGTAGCGTTTAGTCTTCTTGGTTTTATTTGTGCCACTATT TTAACAAAAAGAATGCGTGCAGTAGCTGTAGCCTAA
Upstream 100 bases:
>100_bases GACATTCCCTGCCCGTTCATGTGTTGAAGTCGCTCGGCTACCAAAAGACGTTCTCATTGAAGTAGAGGCTATTGTCTCTC TAAAATAAGGTAGGAATATT
Downstream 100 bases:
>100_bases ATAAAATGACTATCTCAACATCATGACTTGTCATAAAGAACCGCCCGAGCAATATGCAATGGCGGTTCAGTTCTTTATTT CAGGAGTCATTGAATAGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MNKWTKLCFLILGGGTIFKLSSMKDVFYIPMQQDWGLTNTQIGFGFTVYAIIQTVGLFSSLYIADRFSKKILLPVGLIGV GLCGAYLATLPPFTGYLIAFGAMAFFGEVVYWPVLLKAVRLLGTKEEQGRMFGFLEAGRGVIDVLIASGALFVFVQFGEG KAGMQAGLIYYTIATILVGVITWFIVDSDDKIKVDNADKVNKHVLAGIKDVIKSPNLWLASFCIFFVYSAYCGLTYFIPF LKDIYGLPVALIGAYGIINQYGLKMVGGPVGGFLADKVAKSPTVYLKWTFLISAIAMILFIQLPHDSMNVYLGMMATLGF GAIIFSQRAIFFAPMDEIGTSREHAGSAMAFGCIIGYMPSMFAYALYGSLLDNFEGIQGYNYIFSLMVAFSLLGFICATI LTKRMRAVAVA
Sequences:
>Translated_411_residues MNKWTKLCFLILGGGTIFKLSSMKDVFYIPMQQDWGLTNTQIGFGFTVYAIIQTVGLFSSLYIADRFSKKILLPVGLIGV GLCGAYLATLPPFTGYLIAFGAMAFFGEVVYWPVLLKAVRLLGTKEEQGRMFGFLEAGRGVIDVLIASGALFVFVQFGEG KAGMQAGLIYYTIATILVGVITWFIVDSDDKIKVDNADKVNKHVLAGIKDVIKSPNLWLASFCIFFVYSAYCGLTYFIPF LKDIYGLPVALIGAYGIINQYGLKMVGGPVGGFLADKVAKSPTVYLKWTFLISAIAMILFIQLPHDSMNVYLGMMATLGF GAIIFSQRAIFFAPMDEIGTSREHAGSAMAFGCIIGYMPSMFAYALYGSLLDNFEGIQGYNYIFSLMVAFSLLGFICATI LTKRMRAVAVA >Mature_411_residues MNKWTKLCFLILGGGTIFKLSSMKDVFYIPMQQDWGLTNTQIGFGFTVYAIIQTVGLFSSLYIADRFSKKILLPVGLIGV GLCGAYLATLPPFTGYLIAFGAMAFFGEVVYWPVLLKAVRLLGTKEEQGRMFGFLEAGRGVIDVLIASGALFVFVQFGEG KAGMQAGLIYYTIATILVGVITWFIVDSDDKIKVDNADKVNKHVLAGIKDVIKSPNLWLASFCIFFVYSAYCGLTYFIPF LKDIYGLPVALIGAYGIINQYGLKMVGGPVGGFLADKVAKSPTVYLKWTFLISAIAMILFIQLPHDSMNVYLGMMATLGF GAIIFSQRAIFFAPMDEIGTSREHAGSAMAFGCIIGYMPSMFAYALYGSLLDNFEGIQGYNYIFSLMVAFSLLGFICATI LTKRMRAVAVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1790306, Length=408, Percent_Identity=48.2843137254902, Blast_Score=399, Evalue=1e-112, Organism=Escherichia coli, GI2367161, Length=382, Percent_Identity=26.4397905759162, Blast_Score=159, Evalue=2e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 44954; Mature: 44954
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKWTKLCFLILGGGTIFKLSSMKDVFYIPMQQDWGLTNTQIGFGFTVYAIIQTVGLFSS CCCHHHHHHHEECCCCEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH LYIADRFSKKILLPVGLIGVGLCGAYLATLPPFTGYLIAFGAMAFFGEVVYWPVLLKAVR HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLGTKEEQGRMFGFLEAGRGVIDVLIASGALFVFVQFGEGKAGMQAGLIYYTIATILVGV HHCCCCCCCCEEEHHHHCCHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHH ITWFIVDSDDKIKVDNADKVNKHVLAGIKDVIKSPNLWLASFCIFFVYSAYCGLTYFIPF HHHHEECCCCCEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LKDIYGLPVALIGAYGIINQYGLKMVGGPVGGFLADKVAKSPTVYLKWTFLISAIAMILF HHHHHCCHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHCCCCEEEEEHHHHHHHHHHHHE IQLPHDSMNVYLGMMATLGFGAIIFSQRAIFFAPMDEIGTSREHAGSAMAFGCIIGYMPS EECCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHCCCHHHCCCHHHHHHHHHHHHH MFAYALYGSLLDNFEGIQGYNYIFSLMVAFSLLGFICATILTKRMRAVAVA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNKWTKLCFLILGGGTIFKLSSMKDVFYIPMQQDWGLTNTQIGFGFTVYAIIQTVGLFSS CCCHHHHHHHEECCCCEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH LYIADRFSKKILLPVGLIGVGLCGAYLATLPPFTGYLIAFGAMAFFGEVVYWPVLLKAVR HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLGTKEEQGRMFGFLEAGRGVIDVLIASGALFVFVQFGEGKAGMQAGLIYYTIATILVGV HHCCCCCCCCEEEHHHHCCHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHH ITWFIVDSDDKIKVDNADKVNKHVLAGIKDVIKSPNLWLASFCIFFVYSAYCGLTYFIPF HHHHEECCCCCEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LKDIYGLPVALIGAYGIINQYGLKMVGGPVGGFLADKVAKSPTVYLKWTFLISAIAMILF HHHHHCCHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHCCCCEEEEEHHHHHHHHHHHHE IQLPHDSMNVYLGMMATLGFGAIIFSQRAIFFAPMDEIGTSREHAGSAMAFGCIIGYMPS EECCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHCCCHHHCCCHHHHHHHHHHHHH MFAYALYGSLLDNFEGIQGYNYIFSLMVAFSLLGFICATILTKRMRAVAVA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8346018; 9278503 [H]