Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is 218928771
Identifier: 218928771
GI number: 218928771
Start: 1860799
End: 1861422
Strand: Reverse
Name: 218928771
Synonym: YPO1635
Alternate gene names: NA
Gene position: 1861422-1860799 (Counterclockwise)
Preceding gene: 218928772
Following gene: 218928770
Centisome position: 40.0
GC content: 44.07
Gene sequence:
>624_bases ATGTTGAAACAATCCCTATTATCCCTTGCCCTGATGGGTTCCTGTAGTGTCGCCATGGCAGATAACTACACTTATGTCGC TGGTGGTTTGCAGTTCGGTTCAATCAATAGCAACTCACGCTTTGATCAACAGTTTGACCGACAAAATTATAGCCATATTG GCAATAAAAATATGGGTGGGATTTATCTTAACGGCGGTTATAGCTTTGATAACTCGCTCTTCATTGATGGCCGACTTAGC AGCCTTGCCAATGATAACCGTGGTAGTGCAGATGCCGTTCTTGGATTAGGCTATTATTTTGCTTTTACTCCGGATATTGA TTTCTACACCGTCGTGGGTGCCAGCCGCCATGCATTAGTATTTGATGCCAGCAAAGACGGTAAAAAAACCAATACTTATA ACAGTGCTAGCGGTGAAATTGGGGTTAAAACCAAACTATCACCAGATATTGGCGTGAACATCGCCTATCGTCTGGCAAAT TATGATAAACGCGCATTTCATGAAGCGCGGATCATGGCAGATTATGCTCTGACACAAAAACTGGCCGCTGAAGTCGGTTA TACCTACCATAACTGGCGAGTCAGTGACCAAGCGATGCAAGTCGGCCTACGGTATAACTTCTAA
Upstream 100 bases:
>100_bases CACTAACCTTCGCTGTTCATCCACTGTTTACCCGCTGTTTAACGGCTGTCATTGATAATGCTCACAATTTCAAAAGGACG TTACAATCACAGGAGCTGTT
Downstream 100 bases:
>100_bases TATCGTTACAGCGCTTAAATGGCTACCACATTTAAATTGTTACAACATTTAAATTGTTGCAACGTTTACATTGTGACGGC GTCTAAGTTTTTATAGCGCG
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MLKQSLLSLALMGSCSVAMADNYTYVAGGLQFGSINSNSRFDQQFDRQNYSHIGNKNMGGIYLNGGYSFDNSLFIDGRLS SLANDNRGSADAVLGLGYYFAFTPDIDFYTVVGASRHALVFDASKDGKKTNTYNSASGEIGVKTKLSPDIGVNIAYRLAN YDKRAFHEARIMADYALTQKLAAEVGYTYHNWRVSDQAMQVGLRYNF
Sequences:
>Translated_207_residues MLKQSLLSLALMGSCSVAMADNYTYVAGGLQFGSINSNSRFDQQFDRQNYSHIGNKNMGGIYLNGGYSFDNSLFIDGRLS SLANDNRGSADAVLGLGYYFAFTPDIDFYTVVGASRHALVFDASKDGKKTNTYNSASGEIGVKTKLSPDIGVNIAYRLAN YDKRAFHEARIMADYALTQKLAAEVGYTYHNWRVSDQAMQVGLRYNF >Mature_207_residues MLKQSLLSLALMGSCSVAMADNYTYVAGGLQFGSINSNSRFDQQFDRQNYSHIGNKNMGGIYLNGGYSFDNSLFIDGRLS SLANDNRGSADAVLGLGYYFAFTPDIDFYTVVGASRHALVFDASKDGKKTNTYNSASGEIGVKTKLSPDIGVNIAYRLAN YDKRAFHEARIMADYALTQKLAAEVGYTYHNWRVSDQAMQVGLRYNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22827; Mature: 22827
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKQSLLSLALMGSCSVAMADNYTYVAGGLQFGSINSNSRFDQQFDRQNYSHIGNKNMGG CCHHHHHHHHHHCCCEEEEECCEEEEECCEEECCCCCCCCHHHHHHHCHHHHCCCCCCCE IYLNGGYSFDNSLFIDGRLSSLANDNRGSADAVLGLGYYFAFTPDIDFYTVVGASRHALV EEEECCCCCCCCEEECCCHHHHCCCCCCCCCEEEEEEEEEEECCCCCEEEEECCCCEEEE FDASKDGKKTNTYNSASGEIGVKTKLSPDIGVNIAYRLANYDKRAFHEARIMADYALTQK EECCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH LAAEVGYTYHNWRVSDQAMQVGLRYNF HHHHHCCEEECEEECHHHHEEEEEECC >Mature Secondary Structure MLKQSLLSLALMGSCSVAMADNYTYVAGGLQFGSINSNSRFDQQFDRQNYSHIGNKNMGG CCHHHHHHHHHHCCCEEEEECCEEEEECCEEECCCCCCCCHHHHHHHCHHHHCCCCCCCE IYLNGGYSFDNSLFIDGRLSSLANDNRGSADAVLGLGYYFAFTPDIDFYTVVGASRHALV EEEECCCCCCCCEEECCCHHHHCCCCCCCCCEEEEEEEEEEECCCCCEEEEECCCCEEEE FDASKDGKKTNTYNSASGEIGVKTKLSPDIGVNIAYRLANYDKRAFHEARIMADYALTQK EECCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH LAAEVGYTYHNWRVSDQAMQVGLRYNF HHHHHCCEEECEEECHHHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA