Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is yyaM [H]
Identifier: 218928334
GI number: 218928334
Start: 1318286
End: 1319167
Strand: Reverse
Name: yyaM [H]
Synonym: YPO1170
Alternate gene names: 218928334
Gene position: 1319167-1318286 (Counterclockwise)
Preceding gene: 218928340
Following gene: 218928331
Centisome position: 28.35
GC content: 45.46
Gene sequence:
>882_bases ATGACAACAAGAGTACTTAAAGCGCATTTGCAAATGTTGGGGTTTACCGCTCTACTTGGCGGTTCCTTTATTGCCAGCGC CACCATCAGCAACGCACTGCCACCAATGGTAATTACTTGGCTGAGATACGCTATTGCAAGCCTGTTTTTTGTTGTATTGC TGGTGAGTCAGGGTTTACTAACGTTACCTCATTACCGAGATTTGGGCCGTTATACTCTGATTAGCCTACCGCCGCTGCTC TATTTTGCCTGTATGATCTTTTCACTGCAGACAACCAGCGCGATAAATTCGAGTGCGTTATACACCACTGTGCCATTAAT GAGCATGGTAATGAGTGTGGTGTTTTTGAACGCAAAATCGACGTGGCCTGTGGTAGCCGCATTATTGCTTGGAATTTTAG GGGCATTATTAATCATTTTTAAAGGTGACTTGTCTCAGGTTTTACGCTTGTCGCTGATGCCATCTGATTACCTGTTCCTG TTTGGTTGTTTAGGCATGGCGCTGAATCCTATTGTGGTGAAGAAGTTACATCGGGGTGAGCACGCCTTGGTGCTTACCGG TTGGAGCTTGATATGCGCCACACTACTGCTAACGGTGATCATCGCCTATCAGCTTCCAGAAATTGAATGGCGCAATATTA GCGTCATCACCTGGAGCGGCGTTTTATATCTTGCCACCTTTGCCACCGCATTAAGTTTCTTTCTGTTCCAAAAAGCCTGC ATTGTGCTTTCGCCGACGAAAGTATCAGGCTATGTGTACCTGATCCCGCTGTCAGTCATTGTCACTAATATGATGTTAGG CCAGACAATAAATTGGCAAGAGATCGCCAGCGGAGCCATTTTAGTGATTATCGCGATGGCTATTTTAGTTAAAGCCAAGT AA
Upstream 100 bases:
>100_bases ACCAATACTAAAAACCCGCTAATCCATACTGAAAATGTAATGGTTCAGAATGTGTTTCCACGCAATTATCATCGATCACA AGAGGGTAACGGGTAAGCAC
Downstream 100 bases:
>100_bases TACCGGCCAGTGAATGCCACAGATTCAAAAATCACACTCAAAATAACGCAAGCAACTTATTTAGTGCCGGAGTCACGCTA TCAGGGTGATAAACAGCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MTTRVLKAHLQMLGFTALLGGSFIASATISNALPPMVITWLRYAIASLFFVVLLVSQGLLTLPHYRDLGRYTLISLPPLL YFACMIFSLQTTSAINSSALYTTVPLMSMVMSVVFLNAKSTWPVVAALLLGILGALLIIFKGDLSQVLRLSLMPSDYLFL FGCLGMALNPIVVKKLHRGEHALVLTGWSLICATLLLTVIIAYQLPEIEWRNISVITWSGVLYLATFATALSFFLFQKAC IVLSPTKVSGYVYLIPLSVIVTNMMLGQTINWQEIASGAILVIIAMAILVKAK
Sequences:
>Translated_293_residues MTTRVLKAHLQMLGFTALLGGSFIASATISNALPPMVITWLRYAIASLFFVVLLVSQGLLTLPHYRDLGRYTLISLPPLL YFACMIFSLQTTSAINSSALYTTVPLMSMVMSVVFLNAKSTWPVVAALLLGILGALLIIFKGDLSQVLRLSLMPSDYLFL FGCLGMALNPIVVKKLHRGEHALVLTGWSLICATLLLTVIIAYQLPEIEWRNISVITWSGVLYLATFATALSFFLFQKAC IVLSPTKVSGYVYLIPLSVIVTNMMLGQTINWQEIASGAILVIIAMAILVKAK >Mature_292_residues TTRVLKAHLQMLGFTALLGGSFIASATISNALPPMVITWLRYAIASLFFVVLLVSQGLLTLPHYRDLGRYTLISLPPLLY FACMIFSLQTTSAINSSALYTTVPLMSMVMSVVFLNAKSTWPVVAALLLGILGALLIIFKGDLSQVLRLSLMPSDYLFLF GCLGMALNPIVVKKLHRGEHALVLTGWSLICATLLLTVIIAYQLPEIEWRNISVITWSGVLYLATFATALSFFLFQKACI VLSPTKVSGYVYLIPLSVIVTNMMLGQTINWQEIASGAILVIIAMAILVKAK
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 32037; Mature: 31906
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRVLKAHLQMLGFTALLGGSFIASATISNALPPMVITWLRYAIASLFFVVLLVSQGLL CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC TLPHYRDLGRYTLISLPPLLYFACMIFSLQTTSAINSSALYTTVPLMSMVMSVVFLNAKS CCCCHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC TWPVVAALLLGILGALLIIFKGDLSQVLRLSLMPSDYLFLFGCLGMALNPIVVKKLHRGE CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC HALVLTGWSLICATLLLTVIIAYQLPEIEWRNISVITWSGVLYLATFATALSFFLFQKAC EEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHH IVLSPTKVSGYVYLIPLSVIVTNMMLGQTINWQEIASGAILVIIAMAILVKAK HEECCCCCCCEEEEEEHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHCCC >Mature Secondary Structure TTRVLKAHLQMLGFTALLGGSFIASATISNALPPMVITWLRYAIASLFFVVLLVSQGLL CHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC TLPHYRDLGRYTLISLPPLLYFACMIFSLQTTSAINSSALYTTVPLMSMVMSVVFLNAKS CCCCHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC TWPVVAALLLGILGALLIIFKGDLSQVLRLSLMPSDYLFLFGCLGMALNPIVVKKLHRGE CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC HALVLTGWSLICATLLLTVIIAYQLPEIEWRNISVITWSGVLYLATFATALSFFLFQKAC EEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHH IVLSPTKVSGYVYLIPLSVIVTNMMLGQTINWQEIASGAILVIIAMAILVKAK HEECCCCCCCEEEEEEHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]