| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is nadA [H]
Identifier: 218928295
GI number: 218928295
Start: 1273693
End: 1274754
Strand: Direct
Name: nadA [H]
Synonym: YPO1127
Alternate gene names: 218928295
Gene position: 1273693-1274754 (Clockwise)
Preceding gene: 218928294
Following gene: 218928296
Centisome position: 27.37
GC content: 50.75
Gene sequence:
>1062_bases ATGAGCGAAATTTTTGATGTGAATGCGGCTATTTATCCTTTCCCGGCGCGGCCTGTTCCGTTGGACACCAATGAAAAAGC TTTTTATCGTGAGAAAATAAAAACACTGTTAAAGCAACGCGACGCAGTGTTAGTCGCTCACTATTACACTGATCCCGAAA TTCAGGCACTGGCCGAAGAGACGGGGGGCTGTGTCGCCGACTCACTTGAAATGGCTCGTTTTGGCAATAATCACCCGGCA TCAACGCTACTGGTTGCTGGTGTACGTTTTATGGGGGAAACCGCCAAAATTCTCAATCCAGAGAAAAAAGTGTTAATGCC AACTCTGAATGCGGAATGTTCACTGGATTTAGGATGCCCGGTTGATGAGTTTACCGCATTTTGTGACAGCCATCCGGATC GCACCGTGGTGGTGTACGCCAACACCTCAGCGGCAGTAAAAGCCAAGGCGGATTGGGTTGTAACGTCCAGTATTGCGGTT GAATTAATTGAGCATCTCGATAGCTTGGGCGAGAAAATTATTTGGGCACCTGATCGCCATTTGGGCAGCTACGTACAGAA GAAGAGTGGTGCCGATGTATTGTGCTGGCAGGGGGCCTGTATCGTCCATGACGAGTTTAAAACTCAGGCGCTGGCCCGGA TGAAAGCGTTATACCCTGATGCCGCTGTGTTGGTCCACCCAGAGTCACCACAGGCGGTGGTGGATATGGCTGATGCCGTT GGGTCGACCAGTCAACTGATCCAAGCGGCGAAGACACTGCCGCAGAAAACGTTAATTGTTGCCACCGATCGGGGCATTTT TTACAAGATGCAGCAGGCCTGCCCGGATAAAGAGTTGTTTGAAGCACCTACTGCAGGTGAAGGGGCGACATGCCGCAGTT GTGCCCATTGTCCATGGATGGCGATGAATGGCCTCCGAGCAATCGCTGAAGGGCTGGAGCAGGGTGGGGTGATGCATGAG ATACATGTCGATGAAGAATTGCGTCAGCAGGCGCTGATACCGTTAAATCGCATGCTGGATTTTGCCAATCAATTGAAGTT ACAGGTCAAAGGCAATGCCTGA
Upstream 100 bases:
>100_bases TATTTTGTTTAGGATAAAAAACAAATCAATTCAATTCTTACTGGGTGGCTAGCAGCGATCTGATAGCTTCAGTAATACCA CAGCAACAGAGATGTGAGCG
Downstream 100 bases:
>100_bases GTAACTGGTGAGAATATTCATTCGGCGCCTCTTGGCGTCGTGAATAATCACCTATCATGAGATGAGCAAGAGACTTTTAT TTTAATAAATCAGTTCTATC
Product: quinolinate synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MSEIFDVNAAIYPFPARPVPLDTNEKAFYREKIKTLLKQRDAVLVAHYYTDPEIQALAEETGGCVADSLEMARFGNNHPA STLLVAGVRFMGETAKILNPEKKVLMPTLNAECSLDLGCPVDEFTAFCDSHPDRTVVVYANTSAAVKAKADWVVTSSIAV ELIEHLDSLGEKIIWAPDRHLGSYVQKKSGADVLCWQGACIVHDEFKTQALARMKALYPDAAVLVHPESPQAVVDMADAV GSTSQLIQAAKTLPQKTLIVATDRGIFYKMQQACPDKELFEAPTAGEGATCRSCAHCPWMAMNGLRAIAEGLEQGGVMHE IHVDEELRQQALIPLNRMLDFANQLKLQVKGNA
Sequences:
>Translated_353_residues MSEIFDVNAAIYPFPARPVPLDTNEKAFYREKIKTLLKQRDAVLVAHYYTDPEIQALAEETGGCVADSLEMARFGNNHPA STLLVAGVRFMGETAKILNPEKKVLMPTLNAECSLDLGCPVDEFTAFCDSHPDRTVVVYANTSAAVKAKADWVVTSSIAV ELIEHLDSLGEKIIWAPDRHLGSYVQKKSGADVLCWQGACIVHDEFKTQALARMKALYPDAAVLVHPESPQAVVDMADAV GSTSQLIQAAKTLPQKTLIVATDRGIFYKMQQACPDKELFEAPTAGEGATCRSCAHCPWMAMNGLRAIAEGLEQGGVMHE IHVDEELRQQALIPLNRMLDFANQLKLQVKGNA >Mature_352_residues SEIFDVNAAIYPFPARPVPLDTNEKAFYREKIKTLLKQRDAVLVAHYYTDPEIQALAEETGGCVADSLEMARFGNNHPAS TLLVAGVRFMGETAKILNPEKKVLMPTLNAECSLDLGCPVDEFTAFCDSHPDRTVVVYANTSAAVKAKADWVVTSSIAVE LIEHLDSLGEKIIWAPDRHLGSYVQKKSGADVLCWQGACIVHDEFKTQALARMKALYPDAAVLVHPESPQAVVDMADAVG STSQLIQAAKTLPQKTLIVATDRGIFYKMQQACPDKELFEAPTAGEGATCRSCAHCPWMAMNGLRAIAEGLEQGGVMHEI HVDEELRQQALIPLNRMLDFANQLKLQVKGNA
Specific function: Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate [H]
COG id: COG0379
COG function: function code H; Quinolinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the quinolinate synthase A family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786964, Length=346, Percent_Identity=82.0809248554913, Blast_Score=612, Evalue=1e-176,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003473 [H]
Pfam domain/function: PF02445 NadA [H]
EC number: =2.5.1.72 [H]
Molecular weight: Translated: 38594; Mature: 38462
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEIFDVNAAIYPFPARPVPLDTNEKAFYREKIKTLLKQRDAVLVAHYYTDPEIQALAEE CCCEEECCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHH TGGCVADSLEMARFGNNHPASTLLVAGVRFMGETAKILNPEKKVLMPTLNAECSLDLGCP HCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHCCCCHHEEEEECCCCEEEECCCC VDEFTAFCDSHPDRTVVVYANTSAAVKAKADWVVTSSIAVELIEHLDSLGEKIIWAPDRH HHHHHHHHCCCCCCEEEEEECCCCEEEECCCEEEHHHHHHHHHHHHHHHCCEEEECCCHH LGSYVQKKSGADVLCWQGACIVHDEFKTQALARMKALYPDAAVLVHPESPQAVVDMADAV HHHHHHHCCCCCEEEECCEEEEEHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHC GSTSQLIQAAKTLPQKTLIVATDRGIFYKMQQACPDKELFEAPTAGEGATCRSCAHCPWM CCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCHHHHCCCCCCCCCCCHHHCCCCHH AMNGLRAIAEGLEQGGVMHEIHVDEELRQQALIPLNRMLDFANQLKLQVKGNA HHHHHHHHHHHHHHCCEEEEEECCHHHHHHHCCCHHHHHHHHHHEEEEEECCC >Mature Secondary Structure SEIFDVNAAIYPFPARPVPLDTNEKAFYREKIKTLLKQRDAVLVAHYYTDPEIQALAEE CCEEECCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHH TGGCVADSLEMARFGNNHPASTLLVAGVRFMGETAKILNPEKKVLMPTLNAECSLDLGCP HCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHCCCCHHEEEEECCCCEEEECCCC VDEFTAFCDSHPDRTVVVYANTSAAVKAKADWVVTSSIAVELIEHLDSLGEKIIWAPDRH HHHHHHHHCCCCCCEEEEEECCCCEEEECCCEEEHHHHHHHHHHHHHHHCCEEEECCCHH LGSYVQKKSGADVLCWQGACIVHDEFKTQALARMKALYPDAAVLVHPESPQAVVDMADAV HHHHHHHCCCCCEEEECCEEEEEHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHC GSTSQLIQAAKTLPQKTLIVATDRGIFYKMQQACPDKELFEAPTAGEGATCRSCAHCPWM CCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCHHHHCCCCCCCCCCCHHHCCCCHH AMNGLRAIAEGLEQGGVMHEIHVDEELRQQALIPLNRMLDFANQLKLQVKGNA HHHHHHHHHHHHHHCCEEEEEECCHHHHHHHCCCHHHHHHHHHHEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA