| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is tolQ [H]
Identifier: 218928289
GI number: 218928289
Start: 1267664
End: 1268350
Strand: Direct
Name: tolQ [H]
Synonym: YPO1121
Alternate gene names: 218928289
Gene position: 1267664-1268350 (Clockwise)
Preceding gene: 218928288
Following gene: 218928290
Centisome position: 27.24
GC content: 48.76
Gene sequence:
>687_bases GTGGCTGACATGAACATTCTGGATTTATTCCTGCAGGCAAGCCTATTCGTTAAGCTTATCATGCTGGTTCTGATGGGCTT TTCTATTGCGTCATGGGCTATCATCATTCAACGAACGCGAATTCTGAATGCGGCTACCCGCGATGCTGAAGCCTTCGAAG ATAAGTTTTGGTCCGGCATTGAGCTTTCTCGCTTGTATCAGGAAAGTCAGGCTCGTCGCGATACACTTAGCGGCTCAGAG CAGATCTTCCATTCTGGTTTCAAAGAGTTTGCCCGTCTACATCGTGCAAACAGCCATGCACCAGAAGCGGTGATTGACGG TGCTTCCCGTGCGATGCGCATTTCAATGAACCGCGAGTTAGAAGCGTTGGAAACTCATATTCCGTTCCTCGGTACTGTCG GTTCAATCAGCCCGTATATCGGTCTGTTTGGTACCGTATGGGGGATTATGCATGCCTTTATCTCTCTGGGCGCCGTCAAA CAGGCGACATTACAGATGGTAGCACCGGGTATTGCAGAAGCCCTGATTGCGACAGCGATCGGCCTGTTTGCTGCTATTCC TGCTGTTATGGCCTATAACCGTCTGAATCAGCATGTGAATAAGCTTGAACAAAACTATGACAACTTCATGGAAGAGTTCA TTGCTATTCTGCATCGCCAGGCTTTCGCCAGCACCGAAAGCAAATAA
Upstream 100 bases:
>100_bases GCAATCTTCTGAGTAGTGCAGAAGTATTGATCGCATGTATCGATCCACATCAAATGAAGCCAAGAGCGCTTCCTAAGTCT ATTGTCGCGGAGTTTAAGTA
Downstream 100 bases:
>100_bases GTAGGGGGTTATATGGCGCGAGTACGTGGTCGTAAGCGTCGCGAGCTTAAGTCTGAAATTAATATTGTTCCCTTACTCGA CGTTTTGCTGGTGTTGTTGT
Product: colicin uptake protein TolQ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MADMNILDLFLQASLFVKLIMLVLMGFSIASWAIIIQRTRILNAATRDAEAFEDKFWSGIELSRLYQESQARRDTLSGSE QIFHSGFKEFARLHRANSHAPEAVIDGASRAMRISMNRELEALETHIPFLGTVGSISPYIGLFGTVWGIMHAFISLGAVK QATLQMVAPGIAEALIATAIGLFAAIPAVMAYNRLNQHVNKLEQNYDNFMEEFIAILHRQAFASTESK
Sequences:
>Translated_228_residues MADMNILDLFLQASLFVKLIMLVLMGFSIASWAIIIQRTRILNAATRDAEAFEDKFWSGIELSRLYQESQARRDTLSGSE QIFHSGFKEFARLHRANSHAPEAVIDGASRAMRISMNRELEALETHIPFLGTVGSISPYIGLFGTVWGIMHAFISLGAVK QATLQMVAPGIAEALIATAIGLFAAIPAVMAYNRLNQHVNKLEQNYDNFMEEFIAILHRQAFASTESK >Mature_227_residues ADMNILDLFLQASLFVKLIMLVLMGFSIASWAIIIQRTRILNAATRDAEAFEDKFWSGIELSRLYQESQARRDTLSGSEQ IFHSGFKEFARLHRANSHAPEAVIDGASRAMRISMNRELEALETHIPFLGTVGSISPYIGLFGTVWGIMHAFISLGAVKQ ATLQMVAPGIAEALIATAIGLFAAIPAVMAYNRLNQHVNKLEQNYDNFMEEFIAILHRQAFASTESK
Specific function: Involved in the tonB-independent uptake of proteins [H]
COG id: COG0811
COG function: function code U; Biopolymer transport proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exbB/tolQ family [H]
Homologues:
Organism=Escherichia coli, GI1786958, Length=228, Percent_Identity=89.4736842105263, Blast_Score=404, Evalue=1e-114, Organism=Escherichia coli, GI1789381, Length=204, Percent_Identity=33.8235294117647, Blast_Score=102, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002898 - InterPro: IPR014163 [H]
Pfam domain/function: PF01618 MotA_ExbB [H]
EC number: NA
Molecular weight: Translated: 25365; Mature: 25233
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADMNILDLFLQASLFVKLIMLVLMGFSIASWAIIIQRTRILNAATRDAEAFEDKFWSGI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH ELSRLYQESQARRDTLSGSEQIFHSGFKEFARLHRANSHAPEAVIDGASRAMRISMNREL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH EALETHIPFLGTVGSISPYIGLFGTVWGIMHAFISLGAVKQATLQMVAPGIAEALIATAI HHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLFAAIPAVMAYNRLNQHVNKLEQNYDNFMEEFIAILHRQAFASTESK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ADMNILDLFLQASLFVKLIMLVLMGFSIASWAIIIQRTRILNAATRDAEAFEDKFWSGI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH ELSRLYQESQARRDTLSGSEQIFHSGFKEFARLHRANSHAPEAVIDGASRAMRISMNREL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH EALETHIPFLGTVGSISPYIGLFGTVWGIMHAFISLGAVKQATLQMVAPGIAEALIATAI HHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLFAAIPAVMAYNRLNQHVNKLEQNYDNFMEEFIAILHRQAFASTESK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]