Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is 218928151
Identifier: 218928151
GI number: 218928151
Start: 1087811
End: 1088155
Strand: Reverse
Name: 218928151
Synonym: YPO0980
Alternate gene names: NA
Gene position: 1088155-1087811 (Counterclockwise)
Preceding gene: 218928153
Following gene: 218928150
Centisome position: 23.38
GC content: 30.72
Gene sequence:
>345_bases ATGTTAAAACTAATTATTTTTATTATCTCAGTAATTATTATGATTGGTAGTTACAGTTTTGTCTCGGCCTTGTACATAAG TATGTTCGATATTACTTCTCACAGAAGCGTTGGGATGATATTTATATCTTTTTATTTTTTATTGATTGCCTCACCTGTTT TACTTATAACTTTATTCACAAGATTCAGGGTTAGTTTTGCGATTTTACTTTGTGGAGTATGTTATTTATTCTTTGAATGG TACTCGTTGCACCCTCTCAGAGTTATATTGATGGGGGCAAGTGTAGTAAATGGATATATTTTCATTTTGACGACTAGAAA AATATGGAGCGTGTATTCAATATAG
Upstream 100 bases:
>100_bases ACTACGGAGTCATCAATAGTAGTCAATGCGATGCTTCTGGAGGAAAGTATATCGAAAGAGGAGTTAGATAAATATGGTGT TTGGAATCAAAAATAAATTT
Downstream 100 bases:
>100_bases TGTTCATCAGATAAACTACTCGTTTTTATCTGATGGATTCTTATGGCTAATGTTGATGTAAAATATCTGATTTTTCAGCA CAGGCTCGGTGAAAAAAACA
Product: putative phage protein (partial)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MLKLIIFIISVIIMIGSYSFVSALYISMFDITSHRSVGMIFISFYFLLIASPVLLITLFTRFRVSFAILLCGVCYLFFEW YSLHPLRVILMGASVVNGYIFILTTRKIWSVYSI
Sequences:
>Translated_114_residues MLKLIIFIISVIIMIGSYSFVSALYISMFDITSHRSVGMIFISFYFLLIASPVLLITLFTRFRVSFAILLCGVCYLFFEW YSLHPLRVILMGASVVNGYIFILTTRKIWSVYSI >Mature_114_residues MLKLIIFIISVIIMIGSYSFVSALYISMFDITSHRSVGMIFISFYFLLIASPVLLITLFTRFRVSFAILLCGVCYLFFEW YSLHPLRVILMGASVVNGYIFILTTRKIWSVYSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13158; Mature: 13158
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKLIIFIISVIIMIGSYSFVSALYISMFDITSHRSVGMIFISFYFLLIASPVLLITLFT CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RFRVSFAILLCGVCYLFFEWYSLHPLRVILMGASVVNGYIFILTTRKIWSVYSI HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEEHHHHHHHHCC >Mature Secondary Structure MLKLIIFIISVIIMIGSYSFVSALYISMFDITSHRSVGMIFISFYFLLIASPVLLITLFT CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RFRVSFAILLCGVCYLFFEWYSLHPLRVILMGASVVNGYIFILTTRKIWSVYSI HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA