Definition | Yersinia pestis CO92 chromosome, complete genome. |
---|---|
Accession | NC_003143 |
Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is insA [H]
Identifier: 218928135
GI number: 218928135
Start: 1066251
End: 1066526
Strand: Reverse
Name: insA [H]
Synonym: YPO0964
Alternate gene names: 218928135
Gene position: 1066526-1066251 (Counterclockwise)
Preceding gene: 218928136
Following gene: 218928134
Centisome position: 22.92
GC content: 51.45
Gene sequence:
>276_bases ATGGCTAAGGTTGATGTGAAATGTCCATTTTGCGAGCAGTTCCACCCTGTTAAAAAGCACGGGCCAGGACGCACAGGGCA TCAGCGCTACCGCTGTCAGGCCTGCCGACGGAGCTTTCAACTAGAGTACGAGTATCGTGCCTGCCACCCCGGTATGAAAG AGCAAATTGTCGATCTTGCTATGAACAATGCCGGTATTCGTGATACTGCACGGGCGTTGCATATCAGTATCAATGCGGTC ATGCGCACTTTAAAAAACTCTCGCCGCAGCGTGTAA
Upstream 100 bases:
>100_bases AATAAGGGCCTCCTTAAGTTGTATAACTTCAAAAAAACTGGTCATGCATTCAATGCGGAGATCATCAGGTAAAATCCTCG CATTTATCTGAGAGGGTTTG
Downstream 100 bases:
>100_bases CCACGCTCCCACTGGATAACCTGCAAATTCAGCTTATCTGTGAAGTCGATGAAATGTGGTCATTTGTGGGCAACAAAAAG CAGCAACGTTGGCTTTGGTA
Product: insertion sequence protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MAKVDVKCPFCEQFHPVKKHGPGRTGHQRYRCQACRRSFQLEYEYRACHPGMKEQIVDLAMNNAGIRDTARALHISINAV MRTLKNSRRSV
Sequences:
>Translated_91_residues MAKVDVKCPFCEQFHPVKKHGPGRTGHQRYRCQACRRSFQLEYEYRACHPGMKEQIVDLAMNNAGIRDTARALHISINAV MRTLKNSRRSV >Mature_90_residues AKVDVKCPFCEQFHPVKKHGPGRTGHQRYRCQACRRSFQLEYEYRACHPGMKEQIVDLAMNNAGIRDTARALHISINAVM RTLKNSRRSV
Specific function: Absolutely required for transposition of IS1 [H]
COG id: COG3677
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IS1 elements insA family [H]
Homologues:
Organism=Escherichia coli, GI1789852, Length=90, Percent_Identity=44.4444444444444, Blast_Score=95, Evalue=1e-21, Organism=Escherichia coli, GI1788204, Length=90, Percent_Identity=44.4444444444444, Blast_Score=95, Evalue=1e-21, Organism=Escherichia coli, GI1786204, Length=90, Percent_Identity=44.4444444444444, Blast_Score=95, Evalue=1e-21, Organism=Escherichia coli, GI1790747, Length=90, Percent_Identity=43.3333333333333, Blast_Score=94, Evalue=2e-21, Organism=Escherichia coli, GI87081814, Length=90, Percent_Identity=44.4444444444444, Blast_Score=94, Evalue=2e-21, Organism=Escherichia coli, GI1786471, Length=90, Percent_Identity=44.4444444444444, Blast_Score=94, Evalue=2e-21, Organism=Escherichia coli, GI1786460, Length=90, Percent_Identity=44.4444444444444, Blast_Score=94, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003220 [H]
Pfam domain/function: PF03811 Ins_element1 [H]
EC number: NA
Molecular weight: Translated: 10515; Mature: 10384
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.5 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 9.9 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 8.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVDVKCPFCEQFHPVKKHGPGRTGHQRYRCQACRRSFQLEYEYRACHPGMKEQIVDLA CCCCCCCCCCHHHCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH MNNAGIRDTARALHISINAVMRTLKNSRRSV HCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AKVDVKCPFCEQFHPVKKHGPGRTGHQRYRCQACRRSFQLEYEYRACHPGMKEQIVDLA CCCCCCCCCHHHCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH MNNAGIRDTARALHISINAVMRTLKNSRRSV HCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6265806 [H]