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The map label for this gene is 218928133

Identifier: 218928133

GI number: 218928133

Start: 1064586

End: 1065221

Strand: Reverse

Name: 218928133

Synonym: YPO0962

Alternate gene names: NA

Gene position: 1065221-1064586 (Counterclockwise)

Preceding gene: 218928134

Following gene: 218928131

Centisome position: 22.89

GC content: 51.1

Gene sequence:

>636_bases
ATGCAACCGGCTATCAGCCTGTTGAAAAGTGCGCAGGAACAGATGGAGGCCATCTCCGCAGATGCACAAACCGCCACCGC
CAGTCCGGCCGACCTGCAGGCACAAATCAGTCTGTTGCAGCAAAACCTCACTGAACTGAAACAAGCTGTCCTGTTACTGA
GTGCGCCAAAGGGGATCGCGTTGAGCAGCGGGGAGCATCTGCAAATGAGTGCCAGCGATAACCTGATTGCCACCGCAGGT
AAAAATGCCGACGTCAGCGTCGCGAAAAACTTCTTTATCGGCGTAGGCAATACCCTAAGTATCTTCGTCAGAAAGCTGGG
GATGAAACTAATAGCCAATCAGGGGTCGATAACAGTCCAGGCGCAGAATGATCTAATGGAGTTATTGGCGCGTAAAGCGA
TCACGATCACCAGCACCGAGGATGAGATAAAAATCACCGTCAAGAAGAGGATCACGCTGAATGCGGGAGGCAGTTATATC
ACGCTGGATGAGAATCGGATCGAGTCAGGAACGGCGGGGGAATATTTGACCAAAGCAGGGTATTACGGGCGGTTAGATAA
GGCCAAGCTCCCAACTGAATTTCCAGCCTTAGCCGCTAAAGCTAAACCACCCACTCAGAAGTATCCATTTTCTTAA

Upstream 100 bases:

>100_bases
TTGGAAGAGGTTAGAGATGGAGAAGTATAGAGTTTGGAGATAATTTGTAAAATTAACAGCTAAATTAAAAAATATCTTAC
TTAAATATAAGGTACTGGAG

Downstream 100 bases:

>100_bases
TTAAAGGATTAATCAATGATGTAGTGGATCAGTTATTCAACATCAGCCGGATTGACGGGAGAAAAGAGACCGTCACTGAA
AATATGGACAGTCCCCCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; Rhs Element Vgr Family Protein; VGR-Related Protein; VGR-Like Protein; Vgr-Related Protein; Type VI Secretion System Rhs Element Vgr Protein; Rhs Element Vgr Family; VGR-Related Type VI Secretion System Protein; Vgr Related Protein

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MQPAISLLKSAQEQMEAISADAQTATASPADLQAQISLLQQNLTELKQAVLLLSAPKGIALSSGEHLQMSASDNLIATAG
KNADVSVAKNFFIGVGNTLSIFVRKLGMKLIANQGSITVQAQNDLMELLARKAITITSTEDEIKITVKKRITLNAGGSYI
TLDENRIESGTAGEYLTKAGYYGRLDKAKLPTEFPALAAKAKPPTQKYPFS

Sequences:

>Translated_211_residues
MQPAISLLKSAQEQMEAISADAQTATASPADLQAQISLLQQNLTELKQAVLLLSAPKGIALSSGEHLQMSASDNLIATAG
KNADVSVAKNFFIGVGNTLSIFVRKLGMKLIANQGSITVQAQNDLMELLARKAITITSTEDEIKITVKKRITLNAGGSYI
TLDENRIESGTAGEYLTKAGYYGRLDKAKLPTEFPALAAKAKPPTQKYPFS
>Mature_211_residues
MQPAISLLKSAQEQMEAISADAQTATASPADLQAQISLLQQNLTELKQAVLLLSAPKGIALSSGEHLQMSASDNLIATAG
KNADVSVAKNFFIGVGNTLSIFVRKLGMKLIANQGSITVQAQNDLMELLARKAITITSTEDEIKITVKKRITLNAGGSYI
TLDENRIESGTAGEYLTKAGYYGRLDKAKLPTEFPALAAKAKPPTQKYPFS

Specific function: Unknown

COG id: COG4253

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22496; Mature: 22496

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPAISLLKSAQEQMEAISADAQTATASPADLQAQISLLQQNLTELKQAVLLLSAPKGIA
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
LSSGEHLQMSASDNLIATAGKNADVSVAKNFFIGVGNTLSIFVRKLGMKLIANQGSITVQ
ECCCCEEEEECCCCEEEECCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHEECCCCEEEE
AQNDLMELLARKAITITSTEDEIKITVKKRITLNAGGSYITLDENRIESGTAGEYLTKAG
EHHHHHHHHHHCEEEEECCCCEEEEEEEEEEEEECCCCEEEEECCCCCCCCCCHHHHHCC
YYGRLDKAKLPTEFPALAAKAKPPTQKYPFS
CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MQPAISLLKSAQEQMEAISADAQTATASPADLQAQISLLQQNLTELKQAVLLLSAPKGIA
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
LSSGEHLQMSASDNLIATAGKNADVSVAKNFFIGVGNTLSIFVRKLGMKLIANQGSITVQ
ECCCCEEEEECCCCEEEECCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHEECCCCEEEE
AQNDLMELLARKAITITSTEDEIKITVKKRITLNAGGSYITLDENRIESGTAGEYLTKAG
EHHHHHHHHHHCEEEEECCCCEEEEEEEEEEEEECCCCEEEEECCCCCCCCCCHHHHHCC
YYGRLDKAKLPTEFPALAAKAKPPTQKYPFS
CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA