Definition | Yersinia pestis CO92 chromosome, complete genome. |
---|---|
Accession | NC_003143 |
Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is 218928041
Identifier: 218928041
GI number: 218928041
Start: 953116
End: 953421
Strand: Reverse
Name: 218928041
Synonym: YPO0866
Alternate gene names: NA
Gene position: 953421-953116 (Counterclockwise)
Preceding gene: 218928042
Following gene: 218928032
Centisome position: 20.49
GC content: 46.73
Gene sequence:
>306_bases ATGCCAATAAGTGAAATTAATAGAAAAATTGAGGTGTATATGAAAGGCGTCATCTGTATTGGTGATAAAACCACGCATGG CGGGCAAGTGCTCAGTGGGTCTGGCAAAATGAAATTTGCAGGTATTGGTGTGGCGCGCCTGAATGATCCGGTCTCTTGCC CACAGCATGGTAATACCTTCATTATAGAAGCACATCCTTCATTTAAGGATAACGGCATTCCAGTGGCTTTCCATGGTCAT CGCTGTGGTTGTGGCTGCACCTTGATCAGCTCTCAGAAGGGAGCAACGGTGATCGCTATGCGGTGA
Upstream 100 bases:
>100_bases ATGACACAATAAATAAAATACTAACTGCAGCAGTGCTAAGTTCGCTATAGAAAGGGAATAGTACATTGCTTATCTGTCAG TTAATTGAACATAAAGCGCA
Downstream 100 bases:
>100_bases TGATGGCGGCTAACCAGTGGTTTTCTTGACGGCTCAGCGACGAGCTTAACCCCAAACTTAGCCGATCTCTTATCAAGAGC GGCTATTCTGCATGATCACT
Product: hypothetical protein
Products: NA
Alternate protein names: Conserved Protein; Paar Motif Family Protein
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MPISEINRKIEVYMKGVICIGDKTTHGGQVLSGSGKMKFAGIGVARLNDPVSCPQHGNTFIIEAHPSFKDNGIPVAFHGH RCGCGCTLISSQKGATVIAMR
Sequences:
>Translated_101_residues MPISEINRKIEVYMKGVICIGDKTTHGGQVLSGSGKMKFAGIGVARLNDPVSCPQHGNTFIIEAHPSFKDNGIPVAFHGH RCGCGCTLISSQKGATVIAMR >Mature_100_residues PISEINRKIEVYMKGVICIGDKTTHGGQVLSGSGKMKFAGIGVARLNDPVSCPQHGNTFIIEAHPSFKDNGIPVAFHGHR CGCGCTLISSQKGATVIAMR
Specific function: Unknown
COG id: COG4104
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10696; Mature: 10564
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPISEINRKIEVYMKGVICIGDKTTHGGQVLSGSGKMKFAGIGVARLNDPVSCPQHGNTF CCHHHHCCEEEEEEEEEEEECCCCCCCCEEEECCCCEEEEEEEEEECCCCCCCCCCCCEE IIEAHPSFKDNGIPVAFHGHRCGCGCTLISSQKGATVIAMR EEECCCCCCCCCEEEEECCCCCCCEEEEEECCCCEEEEEEC >Mature Secondary Structure PISEINRKIEVYMKGVICIGDKTTHGGQVLSGSGKMKFAGIGVARLNDPVSCPQHGNTF CHHHHCCEEEEEEEEEEEECCCCCCCCEEEECCCCEEEEEEEEEECCCCCCCCCCCCEE IIEAHPSFKDNGIPVAFHGHRCGCGCTLISSQKGATVIAMR EEECCCCCCCCCEEEEECCCCCCCEEEEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA