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The map label for this gene is 218928029

Identifier: 218928029

GI number: 218928029

Start: 938275

End: 939477

Strand: Reverse

Name: 218928029

Synonym: YPO0853

Alternate gene names: NA

Gene position: 939477-938275 (Counterclockwise)

Preceding gene: 218928030

Following gene: 218928028

Centisome position: 20.19

GC content: 45.97

Gene sequence:

>1203_bases
ATGAAATTCTTTAAACCGGCATTACTGACTGTTTGTTTATCGCTAAGCCTCATGGTTGGGGCTAATGCGGCAGAACCCTT
TACCATTGCGCCATTAAAAAATGTCCCAGCAGATTTTATTAAAGGGGCTGATATTTCCACGTTAGCGGAAGTGGAACGAC
AAGGTGGCAAATTTTTTAATGAACAAAATGTTCAACAAGATGCAATGGCTATCCTGAAGGCTAACGGCGTGAATTATGTG
CGTCTGCGTTTGTGGGTCGATCCCAAAGACAGCGATGGGCAGAGTTACGGCGGTGGCAGTAACGATTTGGCGACCACTTT
GGCGCTGGCTAAACGTGCGAAAGCCCAGGGTTTAAAGGTATTGCTTGATTTCCATTACAGCGATTTCTGGACCGATCCAG
GTAAGCAATTTAAGCCGAAGGCTTGGCAGAAAATGAATTACGACCAGCTTAAAGTCGCCATTCATGACTATACCCGCGAT
ACCATTGCCACCTTCAAAAAAGAGGGTGTCTTGCCTGATATGGTGCAAATCGGCAATGAATCCAATGGCGGTCTTCTCTG
GCCAGAAGGAAAAAGCTGGGGGGAAGGCGGTGGTGAGTTTGATCGGCTGGCGGGTTTGCTGAATGCGGCCATCGGCGGTT
TACGTGAGAACCTCAGTTCCCCTTCAGATGTGAAAATCATGCTGCACCTCGCTGAAGGCACCAAGAATGACACCTTCCAT
TGGTGGTTTGATGAAATAACCAAACGTAATGTGCCGTTCGATATTATTGGTCTGTCGATGTACACCTACTGGGACGGCCC
GATTAGCGCCTTGCAAACCAACATGGATGATATCAGCCAGCGTTACCAAAAAGATGTCATCGTCGTGGAAGCCGCTTATG
GCTATACCTTGGAAAATTGTGATAACGCCGAAAATAGCTTTACCGCTAAAGAAGAGAAAGATGGGGGTTATCCCGGAACG
GTTCAAGGACAAGCGAATTTCATTCATGATCTGATGCAGAGTGTTATTAATGTCCCCGATGGCAGAGGGAAGGGGATATT
TTACTGGGAGCCTACCTGGATTTCTGTTCCGGGAAATACTTGGGCAACACCGGCTGGAATGAAATATATCAATGATAATT
GGAAAGAAGGTAATGCACGTGAAAATCAGGCGTTATTTGATTGCCAAGGAAAAGTATTGCCTTCGATGAAAGTTTTTAAT
TAA

Upstream 100 bases:

>100_bases
GGAGCCGTATTAATTGCAGTCCCCGTTGCTATTCTCTACCTGGCCCTACAGAAATATTTTGTTTCCGGCCTAACGTCAGG
AAGTACTAAGGGATAATATA

Downstream 100 bases:

>100_bases
TCGTTGCCCATTATGGGCAACACCAAGTATTTATTATTTAAGGATGTATTATGTCTAAGTTTCCGCCCTTAAGCGCGAAA
GTTTCTGCGTTATTGCATGG

Product: putative galactosidase

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MKFFKPALLTVCLSLSLMVGANAAEPFTIAPLKNVPADFIKGADISTLAEVERQGGKFFNEQNVQQDAMAILKANGVNYV
RLRLWVDPKDSDGQSYGGGSNDLATTLALAKRAKAQGLKVLLDFHYSDFWTDPGKQFKPKAWQKMNYDQLKVAIHDYTRD
TIATFKKEGVLPDMVQIGNESNGGLLWPEGKSWGEGGGEFDRLAGLLNAAIGGLRENLSSPSDVKIMLHLAEGTKNDTFH
WWFDEITKRNVPFDIIGLSMYTYWDGPISALQTNMDDISQRYQKDVIVVEAAYGYTLENCDNAENSFTAKEEKDGGYPGT
VQGQANFIHDLMQSVINVPDGRGKGIFYWEPTWISVPGNTWATPAGMKYINDNWKEGNARENQALFDCQGKVLPSMKVFN

Sequences:

>Translated_400_residues
MKFFKPALLTVCLSLSLMVGANAAEPFTIAPLKNVPADFIKGADISTLAEVERQGGKFFNEQNVQQDAMAILKANGVNYV
RLRLWVDPKDSDGQSYGGGSNDLATTLALAKRAKAQGLKVLLDFHYSDFWTDPGKQFKPKAWQKMNYDQLKVAIHDYTRD
TIATFKKEGVLPDMVQIGNESNGGLLWPEGKSWGEGGGEFDRLAGLLNAAIGGLRENLSSPSDVKIMLHLAEGTKNDTFH
WWFDEITKRNVPFDIIGLSMYTYWDGPISALQTNMDDISQRYQKDVIVVEAAYGYTLENCDNAENSFTAKEEKDGGYPGT
VQGQANFIHDLMQSVINVPDGRGKGIFYWEPTWISVPGNTWATPAGMKYINDNWKEGNARENQALFDCQGKVLPSMKVFN
>Mature_400_residues
MKFFKPALLTVCLSLSLMVGANAAEPFTIAPLKNVPADFIKGADISTLAEVERQGGKFFNEQNVQQDAMAILKANGVNYV
RLRLWVDPKDSDGQSYGGGSNDLATTLALAKRAKAQGLKVLLDFHYSDFWTDPGKQFKPKAWQKMNYDQLKVAIHDYTRD
TIATFKKEGVLPDMVQIGNESNGGLLWPEGKSWGEGGGEFDRLAGLLNAAIGGLRENLSSPSDVKIMLHLAEGTKNDTFH
WWFDEITKRNVPFDIIGLSMYTYWDGPISALQTNMDDISQRYQKDVIVVEAAYGYTLENCDNAENSFTAKEEKDGGYPGT
VQGQANFIHDLMQSVINVPDGRGKGIFYWEPTWISVPGNTWATPAGMKYINDNWKEGNARENQALFDCQGKVLPSMKVFN

Specific function: Unknown

COG id: COG3867

COG function: function code G; Arabinogalactan endo-1,4-beta-galactosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 53 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011683
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF07745 Glyco_hydro_53 [H]

EC number: NA

Molecular weight: Translated: 44453; Mature: 44453

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFFKPALLTVCLSLSLMVGANAAEPFTIAPLKNVPADFIKGADISTLAEVERQGGKFFN
CCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHCCCCHHHHHHHHHHCCCCCC
EQNVQQDAMAILKANGVNYVRLRLWVDPKDSDGQSYGGGSNDLATTLALAKRAKAQGLKV
CCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEE
LLDFHYSDFWTDPGKQFKPKAWQKMNYDQLKVAIHDYTRDTIATFKKEGVLPDMVQIGNE
EEEECCHHHCCCCCCCCCCHHHHHCCHHHEEEEEHHHHHHHHHHHHHCCCCHHHHHHCCC
SNGGLLWPEGKSWGEGGGEFDRLAGLLNAAIGGLRENLSSPSDVKIMLHLAEGTKNDTFH
CCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEE
WWFDEITKRNVPFDIIGLSMYTYWDGPISALQTNMDDISQRYQKDVIVVEAAYGYTLENC
EEHHHHHCCCCCEEEEEEEEEEEECCHHHHHHCCHHHHHHHHHCCEEEEEEECCCEECCC
DNAENSFTAKEEKDGGYPGTVQGQANFIHDLMQSVINVPDGRGKGIFYWEPTWISVPGNT
CCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEECCCCC
WATPAGMKYINDNWKEGNARENQALFDCQGKVLPSMKVFN
CCCCCCCHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MKFFKPALLTVCLSLSLMVGANAAEPFTIAPLKNVPADFIKGADISTLAEVERQGGKFFN
CCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHCCCCHHHHHHHHHHCCCCCC
EQNVQQDAMAILKANGVNYVRLRLWVDPKDSDGQSYGGGSNDLATTLALAKRAKAQGLKV
CCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEE
LLDFHYSDFWTDPGKQFKPKAWQKMNYDQLKVAIHDYTRDTIATFKKEGVLPDMVQIGNE
EEEECCHHHCCCCCCCCCCHHHHHCCHHHEEEEEHHHHHHHHHHHHHCCCCHHHHHHCCC
SNGGLLWPEGKSWGEGGGEFDRLAGLLNAAIGGLRENLSSPSDVKIMLHLAEGTKNDTFH
CCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEE
WWFDEITKRNVPFDIIGLSMYTYWDGPISALQTNMDDISQRYQKDVIVVEAAYGYTLENC
EEHHHHHCCCCCEEEEEEEEEEEECCHHHHHHCCHHHHHHHHHCCEEEEEEECCCEECCC
DNAENSFTAKEEKDGGYPGTVQGQANFIHDLMQSVINVPDGRGKGIFYWEPTWISVPGNT
CCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEECCCCC
WATPAGMKYINDNWKEGNARENQALFDCQGKVLPSMKVFN
CCCCCCCHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA