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The map label for this gene is bgaB [H]

Identifier: 218928028

GI number: 218928028

Start: 936164

End: 938224

Strand: Reverse

Name: bgaB [H]

Synonym: YPO0852

Alternate gene names: 218928028

Gene position: 938224-936164 (Counterclockwise)

Preceding gene: 218928029

Following gene: 218928027

Centisome position: 20.16

GC content: 50.85

Gene sequence:

>2061_bases
ATGTCTAAGTTTCCGCCCTTAAGCGCGAAAGTTTCTGCGTTATTGCATGGCGCTGACTATAACCCAGAGCAATGGGAAAA
TTATCCTGACATTATTGATAAAGATATTGCCATGATGAAACAGGCAAAATGCAATGTCATGTCAGTGGGAATATTCAGTT
GGGTAAAACTTGAGCCAAGTGAAGGAGAATATAATTTCTCTTGGTTAGATGAATTAATTGAAAAACTTTATGCTGCCGGT
ATCCATATATTCCTGGCGACGCCAAGTGGCGCACGTCCGGCTTGGATGTCGCAGAAATATCCTGAAGTTTTACGTGTCGG
GCGTGATCGGGTGCCTGCGCTGCATGGTGGGCGTCATAACCACTGTATGACCTCGCCGGTATATCGCCAGAAAGTGCGGC
AGATAAACCAGAAGTTAGCAGAGCGTTACGCCCATCATCCTGCGGTTATTGGCTGGCACATCTCTAATGAATACGGCGGC
GAATGTCACTGTCATTCCTGTCAGCAAAAATTCCGCCTCTGGCTTCAGGATCGTTATCAAACGCTGGATAACCTTAACGA
AGCCTGGTGGAGTGCTTTCTGGAGCCACACCTACAGCGATTGGTCGCAAATTGAGTCTCCAGCACCGCAAGGTGAAGTTT
CAATTCATGGTCTGAACCTTGACTGGCGGCGTTTTAATACCGCTCAGGTTACGGAGTTTTGTTCTGAAGAGGCTAAGCCA
CTAAAGGCGGCAAACCCAGAGTTGCCTGTTACGACTAACTTTATGGAGTACTTCTACGATTACGACTACTGGAAGTTGGC
GCAGGTGATTGATTTTATCTCCTGGGACAGCTACCCGATGTGGCATCGTGAGAAAGATGAAACGCAGCTTGCCTGTTATA
CCGCGATGTATCATGACCTCATGCGTACCCTGAAACAGGGCCGTCCATTTGTCTTAATGGAATCAACGCCAAGCGCGACC
AACTGGCAACCTACCAGTAAGTTGAAGAAGCCGGGGATGCATATCCTCTCTTCTTTACAGGCTGTCGCGCACGGTGCGGA
TGCGGTGCAGTATTTCCAATGGCGTAAGAGCCGTGGCTCCGTTGAGAAGTTCCACGGTGCGGTTGTCGACCATGTTGGCC
ACATTGATACCCGTGTTGGGCGGGAGGTGAGCGAACTGGGTCGTATACTCGAGGCCATGTCGCCGGTGATGGGAAGTAAA
GTAGACGCTGATGTTGCCATCATTTTTGATTGGGAAAGTCGTTGGGCTATGGACGACGCCGAAGGCCCACGTAATTGTGG
CTTGGAATATGAGAAAACCGTTGCCGAGCATTACCGTCCATTCTGGGAACGGGGCATTGCGGTCGATATCATTAACGCTG
ACTGCGATCTGTCGGGTTACAAGCTGGTCATTGCACCGATGCTCTATATGGTTCGCGAAGGGTTTGCTGAAAGGGCGACG
CGTTTTGTAGAGCAAGGTGGGCAGTTTGTCGCGACCTACTGGAGCGGTATTGTCAACGAATCTGACCTGTGTCATCTCGG
TGGCTTCCCTGGCCCTCTGCGGCCGCTGTTGGGTATCTGGTCCGAAGAAATTGACTGTCTGGCCGATGGCGAGAGCAATC
AAGTCCAAGGACTTGCAGGCAATAAAGCCGGTCTACAGGGGCCTTATCAGGCCATCCATCTCTGCGATTTGATTCATCTT
GAAGGGGCGACAGCCGTCGCGCGCTATAGAGATGACTTCTATGCTGACCGTGCGGCGGTGACCGTAAACTTTGTTGGCGA
AGGTAAAGCCTGGTATGTCGCTTCACGTAACGATGCGGCTTTCCAGCGTGATTTCTTCATGAACATTGCCGAGGAGCTAA
ACTTGGCACGTGCGCTAGACACCCAGTTCCCTTATGGGGTTACCGCTCACCGTCGTACCGATGGTGAGAGTGAATTTATC
GTGGTAGAAAACTACAGTAATGACAGCAAATCGCTGGTGTTACCTGCGGTATACCGCGATATGGTCGACCAGCAGCCGGT
ACAAGGTAGCCTGACGCTTGCCCCATGGGGAAGCCGAGTGCTAACTCGCTATCTCGAATAA

Upstream 100 bases:

>100_bases
TATTTGATTGCCAAGGAAAAGTATTGCCTTCGATGAAAGTTTTTAATTAATCGTTGCCCATTATGGGCAACACCAAGTAT
TTATTATTTAAGGATGTATT

Downstream 100 bases:

>100_bases
GCATTAACTGAATGCCATACACGCCCATTCAGCCGAGTGGGCGTTTTTTTACATCGACTTACAACGAATTAACTCAATTT
CACTCAACCCACCAACAGAA

Product: putative beta-galactosidase

Products: NA

Alternate protein names: Beta-gal; Beta-1,4-galactooligomerase; Galactooligomerase [H]

Number of amino acids: Translated: 686; Mature: 685

Protein sequence:

>686_residues
MSKFPPLSAKVSALLHGADYNPEQWENYPDIIDKDIAMMKQAKCNVMSVGIFSWVKLEPSEGEYNFSWLDELIEKLYAAG
IHIFLATPSGARPAWMSQKYPEVLRVGRDRVPALHGGRHNHCMTSPVYRQKVRQINQKLAERYAHHPAVIGWHISNEYGG
ECHCHSCQQKFRLWLQDRYQTLDNLNEAWWSAFWSHTYSDWSQIESPAPQGEVSIHGLNLDWRRFNTAQVTEFCSEEAKP
LKAANPELPVTTNFMEYFYDYDYWKLAQVIDFISWDSYPMWHREKDETQLACYTAMYHDLMRTLKQGRPFVLMESTPSAT
NWQPTSKLKKPGMHILSSLQAVAHGADAVQYFQWRKSRGSVEKFHGAVVDHVGHIDTRVGREVSELGRILEAMSPVMGSK
VDADVAIIFDWESRWAMDDAEGPRNCGLEYEKTVAEHYRPFWERGIAVDIINADCDLSGYKLVIAPMLYMVREGFAERAT
RFVEQGGQFVATYWSGIVNESDLCHLGGFPGPLRPLLGIWSEEIDCLADGESNQVQGLAGNKAGLQGPYQAIHLCDLIHL
EGATAVARYRDDFYADRAAVTVNFVGEGKAWYVASRNDAAFQRDFFMNIAEELNLARALDTQFPYGVTAHRRTDGESEFI
VVENYSNDSKSLVLPAVYRDMVDQQPVQGSLTLAPWGSRVLTRYLE

Sequences:

>Translated_686_residues
MSKFPPLSAKVSALLHGADYNPEQWENYPDIIDKDIAMMKQAKCNVMSVGIFSWVKLEPSEGEYNFSWLDELIEKLYAAG
IHIFLATPSGARPAWMSQKYPEVLRVGRDRVPALHGGRHNHCMTSPVYRQKVRQINQKLAERYAHHPAVIGWHISNEYGG
ECHCHSCQQKFRLWLQDRYQTLDNLNEAWWSAFWSHTYSDWSQIESPAPQGEVSIHGLNLDWRRFNTAQVTEFCSEEAKP
LKAANPELPVTTNFMEYFYDYDYWKLAQVIDFISWDSYPMWHREKDETQLACYTAMYHDLMRTLKQGRPFVLMESTPSAT
NWQPTSKLKKPGMHILSSLQAVAHGADAVQYFQWRKSRGSVEKFHGAVVDHVGHIDTRVGREVSELGRILEAMSPVMGSK
VDADVAIIFDWESRWAMDDAEGPRNCGLEYEKTVAEHYRPFWERGIAVDIINADCDLSGYKLVIAPMLYMVREGFAERAT
RFVEQGGQFVATYWSGIVNESDLCHLGGFPGPLRPLLGIWSEEIDCLADGESNQVQGLAGNKAGLQGPYQAIHLCDLIHL
EGATAVARYRDDFYADRAAVTVNFVGEGKAWYVASRNDAAFQRDFFMNIAEELNLARALDTQFPYGVTAHRRTDGESEFI
VVENYSNDSKSLVLPAVYRDMVDQQPVQGSLTLAPWGSRVLTRYLE
>Mature_685_residues
SKFPPLSAKVSALLHGADYNPEQWENYPDIIDKDIAMMKQAKCNVMSVGIFSWVKLEPSEGEYNFSWLDELIEKLYAAGI
HIFLATPSGARPAWMSQKYPEVLRVGRDRVPALHGGRHNHCMTSPVYRQKVRQINQKLAERYAHHPAVIGWHISNEYGGE
CHCHSCQQKFRLWLQDRYQTLDNLNEAWWSAFWSHTYSDWSQIESPAPQGEVSIHGLNLDWRRFNTAQVTEFCSEEAKPL
KAANPELPVTTNFMEYFYDYDYWKLAQVIDFISWDSYPMWHREKDETQLACYTAMYHDLMRTLKQGRPFVLMESTPSATN
WQPTSKLKKPGMHILSSLQAVAHGADAVQYFQWRKSRGSVEKFHGAVVDHVGHIDTRVGREVSELGRILEAMSPVMGSKV
DADVAIIFDWESRWAMDDAEGPRNCGLEYEKTVAEHYRPFWERGIAVDIINADCDLSGYKLVIAPMLYMVREGFAERATR
FVEQGGQFVATYWSGIVNESDLCHLGGFPGPLRPLLGIWSEEIDCLADGESNQVQGLAGNKAGLQGPYQAIHLCDLIHLE
GATAVARYRDDFYADRAAVTVNFVGEGKAWYVASRNDAAFQRDFFMNIAEELNLARALDTQFPYGVTAHRRTDGESEFIV
VENYSNDSKSLVLPAVYRDMVDQQPVQGSLTLAPWGSRVLTRYLE

Specific function: Hydrolyzes oligosaccharides released by the endo-1,4- beta-galactosidase galA from arabinogalactan type I, a pectic plant polysaccharide. It is unable to use lactose as a sole carbon source [H]

COG id: COG1874

COG function: function code G; Beta-galactosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 42 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013739
- InterPro:   IPR013738
- InterPro:   IPR013780
- InterPro:   IPR003476
- InterPro:   IPR013529
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF02449 Glyco_hydro_42; PF08533 Glyco_hydro_42C; PF08532 Glyco_hydro_42M [H]

EC number: =3.2.1.23 [H]

Molecular weight: Translated: 78166; Mature: 78035

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKFPPLSAKVSALLHGADYNPEQWENYPDIIDKDIAMMKQAKCNVMSVGIFSWVKLEPS
CCCCCCCHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEEEEEEECCC
EGEYNFSWLDELIEKLYAAGIHIFLATPSGARPAWMSQKYPEVLRVGRDRVPALHGGRHN
CCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHCCCCHHHHHCCCCCCCCCCCCCCC
HCMTSPVYRQKVRQINQKLAERYAHHPAVIGWHISNEYGGECHCHSCQQKFRLWLQDRYQ
CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
TLDNLNEAWWSAFWSHTYSDWSQIESPAPQGEVSIHGLNLDWRRFNTAQVTEFCSEEAKP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHCCHHHHHHHHHHHCCC
LKAANPELPVTTNFMEYFYDYDYWKLAQVIDFISWDSYPMWHREKDETQLACYTAMYHDL
CCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
MRTLKQGRPFVLMESTPSATNWQPTSKLKKPGMHILSSLQAVAHGADAVQYFQWRKSRGS
HHHHHCCCCEEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
VEKFHGAVVDHVGHIDTRVGREVSELGRILEAMSPVMGSKVDADVAIIFDWESRWAMDDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCC
EGPRNCGLEYEKTVAEHYRPFWERGIAVDIINADCDLSGYKLVIAPMLYMVREGFAERAT
CCCHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
RFVEQGGQFVATYWSGIVNESDLCHLGGFPGPLRPLLGIWSEEIDCLADGESNQVQGLAG
HHHHCCCCEEEHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCC
NKAGLQGPYQAIHLCDLIHLEGATAVARYRDDFYADRAAVTVNFVGEGKAWYVASRNDAA
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEEEEECCCEEEEECCCCCH
FQRDFFMNIAEELNLARALDTQFPYGVTAHRRTDGESEFIVVENYSNDSKSLVLPAVYRD
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEEECCCCCCCCEEHHHHHHH
MVDQQPVQGSLTLAPWGSRVLTRYLE
HHCCCCCCCCEEECCCHHHHHHHHCC
>Mature Secondary Structure 
SKFPPLSAKVSALLHGADYNPEQWENYPDIIDKDIAMMKQAKCNVMSVGIFSWVKLEPS
CCCCCCHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEEEEEEECCC
EGEYNFSWLDELIEKLYAAGIHIFLATPSGARPAWMSQKYPEVLRVGRDRVPALHGGRHN
CCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHCCCCHHHHHCCCCCCCCCCCCCCC
HCMTSPVYRQKVRQINQKLAERYAHHPAVIGWHISNEYGGECHCHSCQQKFRLWLQDRYQ
CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
TLDNLNEAWWSAFWSHTYSDWSQIESPAPQGEVSIHGLNLDWRRFNTAQVTEFCSEEAKP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHCCHHHHHHHHHHHCCC
LKAANPELPVTTNFMEYFYDYDYWKLAQVIDFISWDSYPMWHREKDETQLACYTAMYHDL
CCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
MRTLKQGRPFVLMESTPSATNWQPTSKLKKPGMHILSSLQAVAHGADAVQYFQWRKSRGS
HHHHHCCCCEEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
VEKFHGAVVDHVGHIDTRVGREVSELGRILEAMSPVMGSKVDADVAIIFDWESRWAMDDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCC
EGPRNCGLEYEKTVAEHYRPFWERGIAVDIINADCDLSGYKLVIAPMLYMVREGFAERAT
CCCHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
RFVEQGGQFVATYWSGIVNESDLCHLGGFPGPLRPLLGIWSEEIDCLADGESNQVQGLAG
HHHHCCCCEEEHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCC
NKAGLQGPYQAIHLCDLIHLEGATAVARYRDDFYADRAAVTVNFVGEGKAWYVASRNDAA
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEEEEECCCEEEEECCCCCH
FQRDFFMNIAEELNLARALDTQFPYGVTAHRRTDGESEFIVVENYSNDSKSLVLPAVYRD
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEEECCCCCCCCEEHHHHHHH
MVDQQPVQGSLTLAPWGSRVLTRYLE
HHCCCCCCCCEEECCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA