| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218928019
Identifier: 218928019
GI number: 218928019
Start: 923833
End: 925320
Strand: Direct
Name: 218928019
Synonym: YPO0843
Alternate gene names: NA
Gene position: 923833-925320 (Clockwise)
Preceding gene: 218928018
Following gene: 218928020
Centisome position: 19.85
GC content: 49.6
Gene sequence:
>1488_bases ATGAGTGTTGATATTAGCGCCAAACCCCGTCCGATCATTCCTTATGAACATCCTGATGCGGCGATGTATTACCAGTTGTT TAAACAACATATGATCCGCCAGTGGCATAAAAAACGGCCTTATGCGAGACATGATGCGCGCTTACAAGCCCTGTTTCAGA ATCAAAAGGTGTCGCTGCAAAGCCAGTGTGATTACCTGGTGCGTTATGTGGCTGAAGCATTTGATCATTATGCCGTCTGG GATTATACACATGCTTATTATCCGGGGCGCCCCAGCCAGCAAAATGCGCGCACGGATGCACTGGAAGGCGTAAGCCGTGT CCTGCCAACGCTAGCGGCCTGGTTACACAGCCAACCTACGAGGCTGGATAATACGCGACTTGCTGATCTGAAAGGCGGGG AGCTCGACATTGTGGCTATCTTACGTCGCGCGTTCTTAGCCGGGACTGACCCGACCCATCGTGGATATTGGGGCACGCTG CATGATTATGATCAGCGTATTTGTGAAAGTGCAGACTTGGCATTGGCTTTATGGTTGAGCCATGAGTCGGTCTGGCAGGC GTTTACGCCACCAGAACAGCAACAAGTGACACGCTGGTTCAGCCAGGTTAATACGCTGCAAACGGTGGATAATAACTGGC ATCTCTTCCCGTTAACGGTTCAGTTTGTGATGCGATCACTGAACGGCACTGGCGATATCAGTGATGATAAATACCAGCGC ATCAAAGAGTTCCATGTCGGTGAGGGCTGGTTTCGCGACGGAGCACAGGGCAATTATGATTACTATAACGCTTGGGGATT CCACTACTCTCTCTATTGGCTCGATCAAATAAATCCGGATTATGACCGACAGTTTATTCGTTCCTGCATGGCAGAATTCG TCGCCGCTTATCGCTATCTGATCACCCCACAAGGGATCCCCTTCTTTGGCCGTAGTGCCTGTTATCGCCTGGCGGTATCA GCGCCGTTACTGGCGGTGGCCAGTCACTCAACAGACCCCGTTCATACCGGTGAAGCCAAAAGAGCATTAGAAGCCACACT GCGTTATTTCATTGGTCACGGAGCCATGCGCTTCGGTGCTCCCACACAGGGATTATTCGCAGATGATGAAAGGCTGGTGG ACAACTACAGTGGGCCAGCTAGCAGTTTTTGGTCACTGCGGGCGTTGAATATTGCGCTGTATTGCGCCAATGACTGTGGG TTATGGCAGTGTGAAAGTAGCCAATTACCTATCGAGACCGAAGATTTTAGTTTCACTATTAATGCTATCGATCTCTTTGT TATGGGAACTTTCGAAACGAAAGAGGTGGTTGTTACTTTTCGTTATGATTACACCAAAGAGCAGACACCACTGACCCGTC GTTTAGTGTCACAACCGTGGTTAGAGCGTGTGAAAGAGAACGTTACTGGCCGTGCTGAACGGCCGAAAAACAATTTACTC CGCAAAGGCGTAACCAGCTACAGCTCAAAAATGACGTCACTCTTTTAA
Upstream 100 bases:
>100_bases ATAAGGTGGAGCGAGTGTTCTTAGCCCCCTCTTTTATCCCCTCTTACCCCTCTTTTTATTACCGTTCTCCTTATCCTAGT GACTTGCAGGAACACTGCTC
Downstream 100 bases:
>100_bases CTGCGTTTACTTTCGATGTGATGCAAATCTCTTTTATTTGATTTCTTTTTGTTTGTGTAAGCTTTTTTATGGTTAAATGA AAGGAAATGAAATCACGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 495; Mature: 494
Protein sequence:
>495_residues MSVDISAKPRPIIPYEHPDAAMYYQLFKQHMIRQWHKKRPYARHDARLQALFQNQKVSLQSQCDYLVRYVAEAFDHYAVW DYTHAYYPGRPSQQNARTDALEGVSRVLPTLAAWLHSQPTRLDNTRLADLKGGELDIVAILRRAFLAGTDPTHRGYWGTL HDYDQRICESADLALALWLSHESVWQAFTPPEQQQVTRWFSQVNTLQTVDNNWHLFPLTVQFVMRSLNGTGDISDDKYQR IKEFHVGEGWFRDGAQGNYDYYNAWGFHYSLYWLDQINPDYDRQFIRSCMAEFVAAYRYLITPQGIPFFGRSACYRLAVS APLLAVASHSTDPVHTGEAKRALEATLRYFIGHGAMRFGAPTQGLFADDERLVDNYSGPASSFWSLRALNIALYCANDCG LWQCESSQLPIETEDFSFTINAIDLFVMGTFETKEVVVTFRYDYTKEQTPLTRRLVSQPWLERVKENVTGRAERPKNNLL RKGVTSYSSKMTSLF
Sequences:
>Translated_495_residues MSVDISAKPRPIIPYEHPDAAMYYQLFKQHMIRQWHKKRPYARHDARLQALFQNQKVSLQSQCDYLVRYVAEAFDHYAVW DYTHAYYPGRPSQQNARTDALEGVSRVLPTLAAWLHSQPTRLDNTRLADLKGGELDIVAILRRAFLAGTDPTHRGYWGTL HDYDQRICESADLALALWLSHESVWQAFTPPEQQQVTRWFSQVNTLQTVDNNWHLFPLTVQFVMRSLNGTGDISDDKYQR IKEFHVGEGWFRDGAQGNYDYYNAWGFHYSLYWLDQINPDYDRQFIRSCMAEFVAAYRYLITPQGIPFFGRSACYRLAVS APLLAVASHSTDPVHTGEAKRALEATLRYFIGHGAMRFGAPTQGLFADDERLVDNYSGPASSFWSLRALNIALYCANDCG LWQCESSQLPIETEDFSFTINAIDLFVMGTFETKEVVVTFRYDYTKEQTPLTRRLVSQPWLERVKENVTGRAERPKNNLL RKGVTSYSSKMTSLF >Mature_494_residues SVDISAKPRPIIPYEHPDAAMYYQLFKQHMIRQWHKKRPYARHDARLQALFQNQKVSLQSQCDYLVRYVAEAFDHYAVWD YTHAYYPGRPSQQNARTDALEGVSRVLPTLAAWLHSQPTRLDNTRLADLKGGELDIVAILRRAFLAGTDPTHRGYWGTLH DYDQRICESADLALALWLSHESVWQAFTPPEQQQVTRWFSQVNTLQTVDNNWHLFPLTVQFVMRSLNGTGDISDDKYQRI KEFHVGEGWFRDGAQGNYDYYNAWGFHYSLYWLDQINPDYDRQFIRSCMAEFVAAYRYLITPQGIPFFGRSACYRLAVSA PLLAVASHSTDPVHTGEAKRALEATLRYFIGHGAMRFGAPTQGLFADDERLVDNYSGPASSFWSLRALNIALYCANDCGL WQCESSQLPIETEDFSFTINAIDLFVMGTFETKEVVVTFRYDYTKEQTPLTRRLVSQPWLERVKENVTGRAERPKNNLLR KGVTSYSSKMTSLF
Specific function: Unknown
COG id: COG4289
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57141; Mature: 57010
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVDISAKPRPIIPYEHPDAAMYYQLFKQHMIRQWHKKRPYARHDARLQALFQNQKVSLQ CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHH SQCDYLVRYVAEAFDHYAVWDYTHAYYPGRPSQQNARTDALEGVSRVLPTLAAWLHSQPT HHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC RLDNTRLADLKGGELDIVAILRRAFLAGTDPTHRGYWGTLHDYDQRICESADLALALWLS CCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEC HESVWQAFTPPEQQQVTRWFSQVNTLQTVDNNWHLFPLTVQFVMRSLNGTGDISDDKYQR HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCCCCHHHHH IKEFHVGEGWFRDGAQGNYDYYNAWGFHYSLYWLDQINPDYDRQFIRSCMAEFVAAYRYL HHHHCCCCCHHCCCCCCCCCCEEECEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH ITPQGIPFFGRSACYRLAVSAPLLAVASHSTDPVHTGEAKRALEATLRYFIGHGAMRFGA CCCCCCCCCCHHHHHHHHHHCCHHEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC PTQGLFADDERLVDNYSGPASSFWSLRALNIALYCANDCGLWQCESSQLPIETEDFSFTI CCCCCCCCCHHHHHCCCCCHHHHHHHEEEEEEEEEECCCCCEEECCCCCCCCCCCCEEEE NAIDLFVMGTFETKEVVVTFRYDYTKEQTPLTRRLVSQPWLERVKENVTGRAERPKNNLL EEEEEEEEECCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH RKGVTSYSSKMTSLF HHHHHHHHHHHHHCC >Mature Secondary Structure SVDISAKPRPIIPYEHPDAAMYYQLFKQHMIRQWHKKRPYARHDARLQALFQNQKVSLQ CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHH SQCDYLVRYVAEAFDHYAVWDYTHAYYPGRPSQQNARTDALEGVSRVLPTLAAWLHSQPT HHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC RLDNTRLADLKGGELDIVAILRRAFLAGTDPTHRGYWGTLHDYDQRICESADLALALWLS CCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEC HESVWQAFTPPEQQQVTRWFSQVNTLQTVDNNWHLFPLTVQFVMRSLNGTGDISDDKYQR HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCCCCHHHHH IKEFHVGEGWFRDGAQGNYDYYNAWGFHYSLYWLDQINPDYDRQFIRSCMAEFVAAYRYL HHHHCCCCCHHCCCCCCCCCCEEECEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH ITPQGIPFFGRSACYRLAVSAPLLAVASHSTDPVHTGEAKRALEATLRYFIGHGAMRFGA CCCCCCCCCCHHHHHHHHHHCCHHEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC PTQGLFADDERLVDNYSGPASSFWSLRALNIALYCANDCGLWQCESSQLPIETEDFSFTI CCCCCCCCCHHHHHCCCCCHHHHHHHEEEEEEEEEECCCCCEEECCCCCCCCCCCCEEEE NAIDLFVMGTFETKEVVVTFRYDYTKEQTPLTRRLVSQPWLERVKENVTGRAERPKNNLL EEEEEEEEECCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH RKGVTSYSSKMTSLF HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA