Click here to switch to the map view.

The map label for this gene is yesQ [H]

Identifier: 218927808

GI number: 218927808

Start: 674774

End: 675592

Strand: Direct

Name: yesQ [H]

Synonym: YPO0614

Alternate gene names: 218927808

Gene position: 674774-675592 (Clockwise)

Preceding gene: 218927807

Following gene: 218927809

Centisome position: 14.5

GC content: 46.64

Gene sequence:

>819_bases
ATGCGCATCAGCAAAAAAAATCTGTTGATTTATAGCCTGTTGATCATCATCAGCCTGATCGTGCTGTATCCGTTTTTCTT
TATGATCATGAATTCGTTTAAGACTGGCTCGGAAATCATCAATGCCCCTAACGCTCTGCCGAAGAACTTTTCGTTCAATG
GCTATATTCAAGCCTTTTATAGCCTGAATTTGGGGCGTATTTTCCTCAATACTCTGTTTATTTCCGTTACCGTGACTTTG
GTCAATACGCTACTTTCGGCCATGGTGGCCTACGCCATCGTCAAAATGAATCTCCCTGGCCGCGAGTTCTGGATCAAACT
CATTCTGACCTCAATGATGGTGCCTGCGGTGCTGTTCACCATACCTACCTACATGATGTTGTATTCATGGGGTTGGGTGA
ATACTTTTCAGGCATTGATCGTGCCCGGCACCATTAGCGCCTACAACATCTTCTTACTGGTACAGTTTTTAAAACAGGTG
GATAACGCCTATCTCGAAGCTGCCAGGATCGATGGCGCAGGTGAATTCACCATTTTTTTCAAGGTGGTGTTGCCGATGAT
CCGGCCTGCTCTTGCCACTGTCGCGATCCTCACATTTATGGGGTCATGGAACGACTTTATGGGGCCGCTGTTGTATGTCC
GCGACGATTCACTGATGACATTACAACTGGCGCTGTTCAAGTTTGTTAACGATATCCCTACCGATAACCTTGAGCAATTG
TGGGCGATGACCACCATGATCGCCGTGCCCGTGGTGCTAGTGTTCTTTTTCCTACAGCGCAATTTTATCAAGGCGTTCAC
CGGTATCGGAGTGAAATGA

Upstream 100 bases:

>100_bases
AGATGGGCACCGCCTCAACCATTGGCCTGCTGCTGGCTGCGGTTATCTATATTTTCACCATGCTGCAATTGAAATTTACT
CAGGAAAAGGAGCACAGCTA

Downstream 100 bases:

>100_bases
TGAGTGGAAAGAAAGGGTTCTTTGCGCTGGTGCTGATTATTCTGCTGGCCTATCTCAGCGCGTGGCTGATGGTCTATCAG
CAGTCCAAACGCTATTTTGA

Product: putative permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MRISKKNLLIYSLLIIISLIVLYPFFFMIMNSFKTGSEIINAPNALPKNFSFNGYIQAFYSLNLGRIFLNTLFISVTVTL
VNTLLSAMVAYAIVKMNLPGREFWIKLILTSMMVPAVLFTIPTYMMLYSWGWVNTFQALIVPGTISAYNIFLLVQFLKQV
DNAYLEAARIDGAGEFTIFFKVVLPMIRPALATVAILTFMGSWNDFMGPLLYVRDDSLMTLQLALFKFVNDIPTDNLEQL
WAMTTMIAVPVVLVFFFLQRNFIKAFTGIGVK

Sequences:

>Translated_272_residues
MRISKKNLLIYSLLIIISLIVLYPFFFMIMNSFKTGSEIINAPNALPKNFSFNGYIQAFYSLNLGRIFLNTLFISVTVTL
VNTLLSAMVAYAIVKMNLPGREFWIKLILTSMMVPAVLFTIPTYMMLYSWGWVNTFQALIVPGTISAYNIFLLVQFLKQV
DNAYLEAARIDGAGEFTIFFKVVLPMIRPALATVAILTFMGSWNDFMGPLLYVRDDSLMTLQLALFKFVNDIPTDNLEQL
WAMTTMIAVPVVLVFFFLQRNFIKAFTGIGVK
>Mature_272_residues
MRISKKNLLIYSLLIIISLIVLYPFFFMIMNSFKTGSEIINAPNALPKNFSFNGYIQAFYSLNLGRIFLNTLFISVTVTL
VNTLLSAMVAYAIVKMNLPGREFWIKLILTSMMVPAVLFTIPTYMMLYSWGWVNTFQALIVPGTISAYNIFLLVQFLKQV
DNAYLEAARIDGAGEFTIFFKVVLPMIRPALATVAILTFMGSWNDFMGPLLYVRDDSLMTLQLALFKFVNDIPTDNLEQL
WAMTTMIAVPVVLVFFFLQRNFIKAFTGIGVK

Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=267, Percent_Identity=26.9662921348315, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1789860, Length=264, Percent_Identity=25.3787878787879, Blast_Score=85, Evalue=7e-18,
Organism=Escherichia coli, GI1790464, Length=196, Percent_Identity=30.1020408163265, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30901; Mature: 30901

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRISKKNLLIYSLLIIISLIVLYPFFFMIMNSFKTGSEIINAPNALPKNFSFNGYIQAFY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCHHHHHHHH
SLNLGRIFLNTLFISVTVTLVNTLLSAMVAYAIVKMNLPGREFWIKLILTSMMVPAVLFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
IPTYMMLYSWGWVNTFQALIVPGTISAYNIFLLVQFLKQVDNAYLEAARIDGAGEFTIFF
HHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
KVVLPMIRPALATVAILTFMGSWNDFMGPLLYVRDDSLMTLQLALFKFVNDIPTDNLEQL
HHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCCHHHHH
WAMTTMIAVPVVLVFFFLQRNFIKAFTGIGVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRISKKNLLIYSLLIIISLIVLYPFFFMIMNSFKTGSEIINAPNALPKNFSFNGYIQAFY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCHHHHHHHH
SLNLGRIFLNTLFISVTVTLVNTLLSAMVAYAIVKMNLPGREFWIKLILTSMMVPAVLFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
IPTYMMLYSWGWVNTFQALIVPGTISAYNIFLLVQFLKQVDNAYLEAARIDGAGEFTIFF
HHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
KVVLPMIRPALATVAILTFMGSWNDFMGPLLYVRDDSLMTLQLALFKFVNDIPTDNLEQL
HHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCCHHHHH
WAMTTMIAVPVVLVFFFLQRNFIKAFTGIGVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]