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The map label for this gene is yjcF [C]

Identifier: 218927708

GI number: 218927708

Start: 547163

End: 548266

Strand: Direct

Name: yjcF [C]

Synonym: YPO0510

Alternate gene names: 218927708

Gene position: 547163-548266 (Clockwise)

Preceding gene: 218927707

Following gene: 218927709

Centisome position: 11.76

GC content: 49.55

Gene sequence:

>1104_bases
ATGACACCGTCCGACACCCCTATTATGCCTCCCGACAGTCCACGTCGGATTATTGGCCGGCACTTTACACAGCGTCAGTT
GCAGCAGTTAACGCTGTCTGAGGTTTATTTTATTCAATGCACCTTCACGGATATTTCGTTTGCCGAGATTGCGGTACGCA
ATATTCATTTTGAAAGTTGTCATTTTACTCACCTGCGGCTGGACGGTGGCAGAGTGGAAAACTGCAGTTTCCGTTTCTGT
AAGTTCAATGACGTTTCAGCGCAAGGCGTTTCCATACTCAATACCTCATGTATAGAGGTGCAATGGCAGGGATGCTATCT
CACGGGGTGCTTAATTGAGCGCTGGTTGCTCACCAGTTGTCAGCTCGATGATGCCCAATTGCAGGATATCCAGCTTAATT
ATTGGACCGTGCAAGACACCCCGATGACTCATCTGACGATGAGTGACAGCAAAATGCAAGATTCCAGTTGGCATGGCTGC
ACTATCCAGCAGTCAGTGTGGAAAAACAGCGAACTCATACGTCAGGTGATGGGCAGTTGTGTACTGAAAGAGTGCCAATA
TCAAGCGATTCAAAGCGATACGGTGGTATGGAGTCAGTGCCAGCTTGAGCAGGTTGATTTTCGGCACCAGCCGCTGGAAA
ACAGTAATTTCCACAAAAGCACACTAACACAGTGCGGGTTCAGTGACGCTAATTTGGCTGCCGCGCTGTTCAGTGAAGCG
ACACTCGAGGGCTGTGACTTCAACATGGCGCAATTAGCGGCGGCGCAGTTTGTTGATGCCACATTGCGCGATTGCAATTT
TGACACCGCCGATTTGCAAAACGCCTCTTTGCTACGGGCCAATCTGACGCGATGTCACTTAACGCAGGTCAATTTAACCA
AAGCTGATTTGCGCAGTTGCATGTTGAGCGAGTCGTCGTTACAGGCCAGTAAACTTAGCAAAACCCGTATCCACGGCGCG
CAAATACCCACGCTGGACACACCGCTACAAATGCCGGATCCCTTGCTGAGCCAGATTGATAACTGGTATGGCCATCATCA
ACCCGGTCCAAAAAATAACCCTAAATTCCCTTCGATACCTTCAGGAGCCAGCCGCTATGTCTAG

Upstream 100 bases:

>100_bases
ATGGACACCCGATTTGAACATTGTTTGACGGAAAAGACGCACTGGATCCCGCGTCGTTACACCGTCCCTGCATAAATATC
ACGTTTCAAAGGAGCATGGA

Downstream 100 bases:

>100_bases
ATTAACCACGTTGCTAAAACCGAAAAATTCGTTACCCGGCTATCTGTCTTATTCGCCACGGACGCCGTTGCCCGCCGTAT
CCGCTCCGCCGCAGGTGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MTPSDTPIMPPDSPRRIIGRHFTQRQLQQLTLSEVYFIQCTFTDISFAEIAVRNIHFESCHFTHLRLDGGRVENCSFRFC
KFNDVSAQGVSILNTSCIEVQWQGCYLTGCLIERWLLTSCQLDDAQLQDIQLNYWTVQDTPMTHLTMSDSKMQDSSWHGC
TIQQSVWKNSELIRQVMGSCVLKECQYQAIQSDTVVWSQCQLEQVDFRHQPLENSNFHKSTLTQCGFSDANLAAALFSEA
TLEGCDFNMAQLAAAQFVDATLRDCNFDTADLQNASLLRANLTRCHLTQVNLTKADLRSCMLSESSLQASKLSKTRIHGA
QIPTLDTPLQMPDPLLSQIDNWYGHHQPGPKNNPKFPSIPSGASRYV

Sequences:

>Translated_367_residues
MTPSDTPIMPPDSPRRIIGRHFTQRQLQQLTLSEVYFIQCTFTDISFAEIAVRNIHFESCHFTHLRLDGGRVENCSFRFC
KFNDVSAQGVSILNTSCIEVQWQGCYLTGCLIERWLLTSCQLDDAQLQDIQLNYWTVQDTPMTHLTMSDSKMQDSSWHGC
TIQQSVWKNSELIRQVMGSCVLKECQYQAIQSDTVVWSQCQLEQVDFRHQPLENSNFHKSTLTQCGFSDANLAAALFSEA
TLEGCDFNMAQLAAAQFVDATLRDCNFDTADLQNASLLRANLTRCHLTQVNLTKADLRSCMLSESSLQASKLSKTRIHGA
QIPTLDTPLQMPDPLLSQIDNWYGHHQPGPKNNPKFPSIPSGASRYV
>Mature_366_residues
TPSDTPIMPPDSPRRIIGRHFTQRQLQQLTLSEVYFIQCTFTDISFAEIAVRNIHFESCHFTHLRLDGGRVENCSFRFCK
FNDVSAQGVSILNTSCIEVQWQGCYLTGCLIERWLLTSCQLDDAQLQDIQLNYWTVQDTPMTHLTMSDSKMQDSSWHGCT
IQQSVWKNSELIRQVMGSCVLKECQYQAIQSDTVVWSQCQLEQVDFRHQPLENSNFHKSTLTQCGFSDANLAAALFSEAT
LEGCDFNMAQLAAAQFVDATLRDCNFDTADLQNASLLRANLTRCHLTQVNLTKADLRSCMLSESSLQASKLSKTRIHGAQ
IPTLDTPLQMPDPLLSQIDNWYGHHQPGPKNNPKFPSIPSGASRYV

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 7 pentapeptide repeat domains [H]

Homologues:

Organism=Drosophila melanogaster, GI221377802, Length=192, Percent_Identity=26.5625, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 41471; Mature: 41340

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPSDTPIMPPDSPRRIIGRHFTQRQLQQLTLSEVYFIQCTFTDISFAEIAVRNIHFESC
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCHHHHHHHHEEECCE
HFTHLRLDGGRVENCSFRFCKFNDVSAQGVSILNTSCIEVQWQGCYLTGCLIERWLLTSC
EEEEEEECCCEECCCEEEEEECCCCCCCCEEEEECEEEEEEECCEEEHHHHHHHHHHHHC
QLDDAQLQDIQLNYWTVQDTPMTHLTMSDSKMQDSSWHGCTIQQSVWKNSELIRQVMGSC
CCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCEEHHHHHCCHHHHHHHHHHH
VLKECQYQAIQSDTVVWSQCQLEQVDFRHQPLENSNFHKSTLTQCGFSDANLAAALFSEA
HHHHHHHHHHCCCCEEECCCCHHHHHHCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHH
TLEGCDFNMAQLAAAQFVDATLRDCNFDTADLQNASLLRANLTRCHLTQVNLTKADLRSC
HHCCCCCCHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHCCCEEEEEEECCCHHHHHHH
MLSESSLQASKLSKTRIHGAQIPTLDTPLQMPDPLLSQIDNWYGHHQPGPKNNPKFPSIP
HHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
SGASRYV
CCCCCCC
>Mature Secondary Structure 
TPSDTPIMPPDSPRRIIGRHFTQRQLQQLTLSEVYFIQCTFTDISFAEIAVRNIHFESC
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCHHHHHHHHEEECCE
HFTHLRLDGGRVENCSFRFCKFNDVSAQGVSILNTSCIEVQWQGCYLTGCLIERWLLTSC
EEEEEEECCCEECCCEEEEEECCCCCCCCEEEEECEEEEEEECCEEEHHHHHHHHHHHHC
QLDDAQLQDIQLNYWTVQDTPMTHLTMSDSKMQDSSWHGCTIQQSVWKNSELIRQVMGSC
CCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCEEHHHHHCCHHHHHHHHHHH
VLKECQYQAIQSDTVVWSQCQLEQVDFRHQPLENSNFHKSTLTQCGFSDANLAAALFSEA
HHHHHHHHHHCCCCEEECCCCHHHHHHCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHH
TLEGCDFNMAQLAAAQFVDATLRDCNFDTADLQNASLLRANLTRCHLTQVNLTKADLRSC
HHCCCCCCHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHCCCEEEEEEECCCHHHHHHH
MLSESSLQASKLSKTRIHGAQIPTLDTPLQMPDPLLSQIDNWYGHHQPGPKNNPKFPSIP
HHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
SGASRYV
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]