Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is serB [H]
Identifier: 218927641
GI number: 218927641
Start: 462755
End: 463735
Strand: Direct
Name: serB [H]
Synonym: YPO0442
Alternate gene names: 218927641
Gene position: 462755-463735 (Clockwise)
Preceding gene: 218927639
Following gene: 218927642
Centisome position: 9.94
GC content: 51.89
Gene sequence:
>981_bases ATGTCTAATAGTCTGACCTATTGCGATCTGCCTTCGGAGATCTATCAATGGCCGGGTTTGCCACTTTCACTCAGTGGCGA CGAAGTGATGCCGCTGGATTATCGTGCCGGTCATACAGGTTGGCTGTTGTATGGTAGAAAACTGGATAAACAGCGGATTA CCGATTTTCAACGTCAGCTTGGTGCGGCCATGGTGATTGTTTCTGCCTGGTGTGTGGAAGATTATCAGGTGATCCGGCTA GCGGGTAGCCTAACACCACGAATTAAAACGCTGGCCGATGAGAGCGGCCTTGATGTCGCGCCATTGGGGGCGATACCGCA TCTACGGACTCCCGGCCTGCTGGTCATGGATATGGATTCCACCGCGATCCAAATCGAATGCATTGATGAAATTGCCAAAC TGGCAGGTGTGGGCGATGAGGTGGCGGCGGTCACTGAACGCGCCATGCAAGGTGAGTTGGATTTCTCGGCCAGTCTGCGC CAGCGGGTGGCGGCACTGAAAGGAGCCGATGCCAATATTTTGAAGCAAGTCCGTGACGACTTGCCATTGATGCCGGGGTT GGTCAGCCTGGTGCGTAAACTTCAGGCGTTGGATTGGCATGTGGCTATTGCTTCTGGCGGTTTTACCTATTATGCCGAAT ACCTGCGTGACAAATTGCGGTTGGTTCATGTTGCCGCGAATGAGCTTGAAATCAAAGACGGCAAACTGACCGGGTGTGTA CTGGGGCCAATTGTTGATGCGCAATATAAAGCAGATACCCTTATCAAGCTGGCGGAGAAATTGAATATCCCGCTGGCACA GACTATTGCTATCGGCGATGGCGCTAATGACCTGAAAATGATGCAGGTTGCGGGTTTAGGTTTGGCTTTCCACGCCAAAC CGAAGGTTTATGCCAAAGCGAAAGTGGCGATCCGTCACGGTGATTTACTGAGTGTTCTCTGCATTTTGACCGGTAGCTTA AAGCACGAGAGTGGCAAGTAG
Upstream 100 bases:
>100_bases GCGATAGGATAGCTTGATGCGTTGTTTTACTTGATGCGTTAGTTTTAAATGAGCCGTATATATATATATTGCGTTGTCCC GGTTTCTACAGGAGTAATTC
Downstream 100 bases:
>100_bases GCCATTCGTTGATAAATCATTTAGTTATAATCAAGTGTTTAATGATTTTTTTCGTAAAGTATGCGCGCATAAGATTGAGG TGATGACATGGCGAAAGCAC
Product: phosphoserine phosphatase
Products: NA
Alternate protein names: PSP; PSPase; O-phosphoserine phosphohydrolase [H]
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MSNSLTYCDLPSEIYQWPGLPLSLSGDEVMPLDYRAGHTGWLLYGRKLDKQRITDFQRQLGAAMVIVSAWCVEDYQVIRL AGSLTPRIKTLADESGLDVAPLGAIPHLRTPGLLVMDMDSTAIQIECIDEIAKLAGVGDEVAAVTERAMQGELDFSASLR QRVAALKGADANILKQVRDDLPLMPGLVSLVRKLQALDWHVAIASGGFTYYAEYLRDKLRLVHVAANELEIKDGKLTGCV LGPIVDAQYKADTLIKLAEKLNIPLAQTIAIGDGANDLKMMQVAGLGLAFHAKPKVYAKAKVAIRHGDLLSVLCILTGSL KHESGK
Sequences:
>Translated_326_residues MSNSLTYCDLPSEIYQWPGLPLSLSGDEVMPLDYRAGHTGWLLYGRKLDKQRITDFQRQLGAAMVIVSAWCVEDYQVIRL AGSLTPRIKTLADESGLDVAPLGAIPHLRTPGLLVMDMDSTAIQIECIDEIAKLAGVGDEVAAVTERAMQGELDFSASLR QRVAALKGADANILKQVRDDLPLMPGLVSLVRKLQALDWHVAIASGGFTYYAEYLRDKLRLVHVAANELEIKDGKLTGCV LGPIVDAQYKADTLIKLAEKLNIPLAQTIAIGDGANDLKMMQVAGLGLAFHAKPKVYAKAKVAIRHGDLLSVLCILTGSL KHESGK >Mature_325_residues SNSLTYCDLPSEIYQWPGLPLSLSGDEVMPLDYRAGHTGWLLYGRKLDKQRITDFQRQLGAAMVIVSAWCVEDYQVIRLA GSLTPRIKTLADESGLDVAPLGAIPHLRTPGLLVMDMDSTAIQIECIDEIAKLAGVGDEVAAVTERAMQGELDFSASLRQ RVAALKGADANILKQVRDDLPLMPGLVSLVRKLQALDWHVAIASGGFTYYAEYLRDKLRLVHVAANELEIKDGKLTGCVL GPIVDAQYKADTLIKLAEKLNIPLAQTIAIGDGANDLKMMQVAGLGLAFHAKPKVYAKAKVAIRHGDLLSVLCILTGSLK HESGK
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serB family [H]
Homologues:
Organism=Homo sapiens, GI46249388, Length=171, Percent_Identity=34.5029239766082, Blast_Score=88, Evalue=1e-17, Organism=Escherichia coli, GI1790849, Length=320, Percent_Identity=75, Blast_Score=496, Evalue=1e-142, Organism=Caenorhabditis elegans, GI115534454, Length=265, Percent_Identity=29.4339622641509, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6321647, Length=247, Percent_Identity=38.4615384615385, Blast_Score=161, Evalue=2e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR023190 - InterPro: IPR004469 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.1.3.3 [H]
Molecular weight: Translated: 35355; Mature: 35223
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSLTYCDLPSEIYQWPGLPLSLSGDEVMPLDYRAGHTGWLLYGRKLDKQRITDFQRQL CCCCCEEECCCHHHHHCCCCEEEECCCEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHH GAAMVIVSAWCVEDYQVIRLAGSLTPRIKTLADESGLDVAPLGAIPHLRTPGLLVMDMDS HHHHHHHHHHHHCCHHEEHHHCCCCCHHHHHCCCCCCCEECCCCCCCCCCCCEEEEECCC TAIQIECIDEIAKLAGVGDEVAAVTERAMQGELDFSASLRQRVAALKGADANILKQVRDD CEEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHC LPLMPGLVSLVRKLQALDWHVAIASGGFTYYAEYLRDKLRLVHVAANELEIKDGKLTGCV CCCCHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHEEEEECCCEEECCCCEEEEE LGPIVDAQYKADTLIKLAEKLNIPLAQTIAIGDGANDLKMMQVAGLGLAFHAKPKVYAKA ECCCCCCCCCHHHHHHHHHHHCCCHHHEEEECCCCCHHHHHHHHCCCEEEECCCCEEEEE KVAIRHGDLLSVLCILTGSLKHESGK EEEEECCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SNSLTYCDLPSEIYQWPGLPLSLSGDEVMPLDYRAGHTGWLLYGRKLDKQRITDFQRQL CCCCEEECCCHHHHHCCCCEEEECCCEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHH GAAMVIVSAWCVEDYQVIRLAGSLTPRIKTLADESGLDVAPLGAIPHLRTPGLLVMDMDS HHHHHHHHHHHHCCHHEEHHHCCCCCHHHHHCCCCCCCEECCCCCCCCCCCCEEEEECCC TAIQIECIDEIAKLAGVGDEVAAVTERAMQGELDFSASLRQRVAALKGADANILKQVRDD CEEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHC LPLMPGLVSLVRKLQALDWHVAIASGGFTYYAEYLRDKLRLVHVAANELEIKDGKLTGCV CCCCHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHEEEEECCCEEECCCCEEEEE LGPIVDAQYKADTLIKLAEKLNIPLAQTIAIGDGANDLKMMQVAGLGLAFHAKPKVYAKA ECCCCCCCCCHHHHHHHHHHHCCCHHHEEEECCCCCHHHHHHHHCCCEEEECCCCEEEEE KVAIRHGDLLSVLCILTGSLKHESGK EEEEECCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]