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The map label for this gene is yycG [H]

Identifier: 218906657

GI number: 218906657

Start: 5279106

End: 5280947

Strand: Reverse

Name: yycG [H]

Synonym: BCAH820_5571

Alternate gene names: 218906657

Gene position: 5280947-5279106 (Counterclockwise)

Preceding gene: 218906658

Following gene: 218906656

Centisome position: 99.59

GC content: 35.83

Gene sequence:

>1842_bases
ATGAAGAAAGTCGGTTTTTTTCAATCTATTCATTTAAAATTTGTACTCATATATATGCTATTAATATTGATAGCTATGCA
AGTTATTGGAGTATATTTCGTAAGAGAGTTAGAAAAGAGTCTTGTACAAGGCTTTAGAGATTCTTTAACGCAACAAACGA
ACTTATTATCGTATAACTTGAAACAAGAGTTTAAAAAAAGTTATACAAAAGCAGAGACAGAGTCAACAGATGAAACGATT
AAAACTTCCATTCGAAAATTTGCCTCTGATCGAAAGAAAGATATTCAAGAGGTAAGTGTATTTGATGCGAATAGAAAGCT
GCTCGCTATTTCAGATGAGTCAAAGCAAAACAAGGTAAATAGAACATCAACTGATATAGCTGTTCAGCGGGTATTGGTAC
AAAAAAAACCAGAAGTGAAAATTGAGAAGGATGGTCGTACAGGTCACCGTGTACAAGTTATGATTACTCCTATTATGGAT
GATAACAACAAAGATGCACTTGGTGCCATTTACGTTGTTGCATCCATGGAAGATGTTTATAAGCAGATGAAGGATATTAA
TCAAATCTTTGCGACCGGAACCGTTATTGCATTACTCGTAACAGCTGTACTTGGAATTTTGTTAGCTCAAACGATTACGA
GACCAATCTCTGATATGCGAAGACAAGCGATTGAAATGGCAAAAGGAAACTATTCAAGAAAAGTAAAAGTGCATAGCCAT
GATGAAATTGGACAATTAGCATTATCTTTCAATAATTTATCAAAAAAATTACAACAAGCTCGTTCTTCAACAGAAAGTGA
AAGACGTAAATTGTCATCTGTATTATCACATATGACAGATGGAGTAATCGCTACTGACCGAAAAGGGGACATTATTTTAT
TAAATGATCCTGCGGAAAAGATGCTAAATGTTTCGCGTGAAACGGCGCTCGATCAATCTGTTTTAGAAGTATTGGGAATA
CAAGAAGAATTTACGCTCGATCATTTATACGAAGAGCCTGATTCTGTTTTATTAGATTTTAGTACGAGAAATGAGCCATA
TATTTTACGCGCTAGTTTTTCTGTTATTCAAAAAGAGACAGGAAAAGCAAATGGTTTAATTGCCGTATTATATGATGTGA
CTGAGCAGGAGCGTATAGAAAGGGAACGCCGCGAGTTTGTAGCAAACGTCTCTCATGAATTAAGAACGCCATTAACGACA
ATGCGCAGCTACTTAGAGGCACTTACAGACGGTGCATGGCAAGATCCGAATATTGCACCGCAATTTTTAACAGTTACACA
AGAAGAAACAGAAAGAATGATTAGACTTGTAAATGCGTTATTGCAACTATCTAAACTAGATAGTACAGAACATCGTTTAA
TGAAAGAATGGGTCGACTTTACTGACTTCTTTAATAACATTATTGATCGTTTTGAAATGTCTAAAGAGCAAAACGTAAGT
TTCAAACGATCTTTCTCTAAAAAATCTCGATTTATTGATATGGATACGGATAAAATTACGCAAGTATTGTATAACATTAT
TTCGAATGCATTAAAGTATTCACCAGAAGGTGGAACAGTAACATATCGTTTACGTGATCGCGGAGAATTATTAGAGATTA
GTGTAAGTGACCAAGGAATGGGTATTCCGAAAGAAAACGTCGATAAAATCTTTGAACGTTTTTATCGTGTAGATAAAGCG
CGCTCACGACAAATGGGTGGTACAGGACTTGGATTAGCAATTGCGAAAGAAATGATTGAGGCACATGGTGGCTCGATTTG
GGCGAAGAGTGAAGAAGGAAAAGGGACAACGATTTATTTCACATTACCAATGGCAGCGGATGAAGAGGACGAATGGGAAT
GA

Upstream 100 bases:

>100_bases
TCTACGTGAAAAAATTGAAGATAATCCAAGTCATCCTACATTAATTGTCACTAGACGTGGAGTAGGGTATTACTTGCGTG
ACCCAGAGCAGGAATAGTAT

Downstream 100 bases:

>100_bases
GTATGGAAAATGTTAAAACGATAGTTTTAATTAACTTAGTTGTAATTAGTCTATTTCTTACTTTTAACTTATGGACGTAT
GTGCCAGATTCCACGTCTAT

Product: sensory box histidine kinase YycG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 613; Mature: 613

Protein sequence:

>613_residues
MKKVGFFQSIHLKFVLIYMLLILIAMQVIGVYFVRELEKSLVQGFRDSLTQQTNLLSYNLKQEFKKSYTKAETESTDETI
KTSIRKFASDRKKDIQEVSVFDANRKLLAISDESKQNKVNRTSTDIAVQRVLVQKKPEVKIEKDGRTGHRVQVMITPIMD
DNNKDALGAIYVVASMEDVYKQMKDINQIFATGTVIALLVTAVLGILLAQTITRPISDMRRQAIEMAKGNYSRKVKVHSH
DEIGQLALSFNNLSKKLQQARSSTESERRKLSSVLSHMTDGVIATDRKGDIILLNDPAEKMLNVSRETALDQSVLEVLGI
QEEFTLDHLYEEPDSVLLDFSTRNEPYILRASFSVIQKETGKANGLIAVLYDVTEQERIERERREFVANVSHELRTPLTT
MRSYLEALTDGAWQDPNIAPQFLTVTQEETERMIRLVNALLQLSKLDSTEHRLMKEWVDFTDFFNNIIDRFEMSKEQNVS
FKRSFSKKSRFIDMDTDKITQVLYNIISNALKYSPEGGTVTYRLRDRGELLEISVSDQGMGIPKENVDKIFERFYRVDKA
RSRQMGGTGLGLAIAKEMIEAHGGSIWAKSEEGKGTTIYFTLPMAADEEDEWE

Sequences:

>Translated_613_residues
MKKVGFFQSIHLKFVLIYMLLILIAMQVIGVYFVRELEKSLVQGFRDSLTQQTNLLSYNLKQEFKKSYTKAETESTDETI
KTSIRKFASDRKKDIQEVSVFDANRKLLAISDESKQNKVNRTSTDIAVQRVLVQKKPEVKIEKDGRTGHRVQVMITPIMD
DNNKDALGAIYVVASMEDVYKQMKDINQIFATGTVIALLVTAVLGILLAQTITRPISDMRRQAIEMAKGNYSRKVKVHSH
DEIGQLALSFNNLSKKLQQARSSTESERRKLSSVLSHMTDGVIATDRKGDIILLNDPAEKMLNVSRETALDQSVLEVLGI
QEEFTLDHLYEEPDSVLLDFSTRNEPYILRASFSVIQKETGKANGLIAVLYDVTEQERIERERREFVANVSHELRTPLTT
MRSYLEALTDGAWQDPNIAPQFLTVTQEETERMIRLVNALLQLSKLDSTEHRLMKEWVDFTDFFNNIIDRFEMSKEQNVS
FKRSFSKKSRFIDMDTDKITQVLYNIISNALKYSPEGGTVTYRLRDRGELLEISVSDQGMGIPKENVDKIFERFYRVDKA
RSRQMGGTGLGLAIAKEMIEAHGGSIWAKSEEGKGTTIYFTLPMAADEEDEWE
>Mature_613_residues
MKKVGFFQSIHLKFVLIYMLLILIAMQVIGVYFVRELEKSLVQGFRDSLTQQTNLLSYNLKQEFKKSYTKAETESTDETI
KTSIRKFASDRKKDIQEVSVFDANRKLLAISDESKQNKVNRTSTDIAVQRVLVQKKPEVKIEKDGRTGHRVQVMITPIMD
DNNKDALGAIYVVASMEDVYKQMKDINQIFATGTVIALLVTAVLGILLAQTITRPISDMRRQAIEMAKGNYSRKVKVHSH
DEIGQLALSFNNLSKKLQQARSSTESERRKLSSVLSHMTDGVIATDRKGDIILLNDPAEKMLNVSRETALDQSVLEVLGI
QEEFTLDHLYEEPDSVLLDFSTRNEPYILRASFSVIQKETGKANGLIAVLYDVTEQERIERERREFVANVSHELRTPLTT
MRSYLEALTDGAWQDPNIAPQFLTVTQEETERMIRLVNALLQLSKLDSTEHRLMKEWVDFTDFFNNIIDRFEMSKEQNVS
FKRSFSKKSRFIDMDTDKITQVLYNIISNALKYSPEGGTVTYRLRDRGELLEISVSDQGMGIPKENVDKIFERFYRVDKA
RSRQMGGTGLGLAIAKEMIEAHGGSIWAKSEEGKGTTIYFTLPMAADEEDEWE

Specific function: Member of the two-component regulatory system YycG/YycF involved in the regulation of the ftsAZ operon, the yocH and ykvT, cwlO, lytE, ydjM, yjeA, yoeB genes and the tagAB and tagDEF operons. Probably phosphorylates YycF [H]

COG id: COG5002

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1786600, Length=371, Percent_Identity=31.266846361186, Blast_Score=163, Evalue=2e-41,
Organism=Escherichia coli, GI48994928, Length=318, Percent_Identity=30.5031446540881, Blast_Score=132, Evalue=6e-32,
Organism=Escherichia coli, GI1788393, Length=236, Percent_Identity=33.0508474576271, Blast_Score=128, Evalue=1e-30,
Organism=Escherichia coli, GI1788549, Length=382, Percent_Identity=28.0104712041885, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1786783, Length=232, Percent_Identity=31.8965517241379, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1788713, Length=229, Percent_Identity=28.3842794759825, Blast_Score=109, Evalue=4e-25,
Organism=Escherichia coli, GI1790436, Length=229, Percent_Identity=30.1310043668122, Blast_Score=104, Evalue=2e-23,
Organism=Escherichia coli, GI1786912, Length=244, Percent_Identity=31.5573770491803, Blast_Score=104, Evalue=2e-23,
Organism=Escherichia coli, GI145693157, Length=257, Percent_Identity=27.2373540856031, Blast_Score=102, Evalue=9e-23,
Organism=Escherichia coli, GI1790346, Length=235, Percent_Identity=30.2127659574468, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1789149, Length=230, Percent_Identity=27.8260869565217, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI1787894, Length=223, Percent_Identity=28.6995515695067, Blast_Score=91, Evalue=3e-19,
Organism=Escherichia coli, GI1790300, Length=236, Percent_Identity=31.7796610169492, Blast_Score=88, Evalue=2e-18,
Organism=Escherichia coli, GI87082128, Length=243, Percent_Identity=27.9835390946502, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1790861, Length=203, Percent_Identity=26.6009852216749, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI87081816, Length=248, Percent_Identity=28.6290322580645, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1790551, Length=267, Percent_Identity=26.2172284644195, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1789403, Length=217, Percent_Identity=28.5714285714286, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1788279, Length=205, Percent_Identity=29.7560975609756, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI1787374, Length=213, Percent_Identity=28.6384976525822, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1789808, Length=224, Percent_Identity=27.6785714285714, Blast_Score=65, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 70003; Mature: 70003

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: PS50885 HAMP ; PS50112 PAS ; PS50113 PAC ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVGFFQSIHLKFVLIYMLLILIAMQVIGVYFVRELEKSLVQGFRDSLTQQTNLLSYNL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQEFKKSYTKAETESTDETIKTSIRKFASDRKKDIQEVSVFDANRKLLAISDESKQNKVN
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHCCCC
RTSTDIAVQRVLVQKKPEVKIEKDGRTGHRVQVMITPIMDDNNKDALGAIYVVASMEDVY
CHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHH
KQMKDINQIFATGTVIALLVTAVLGILLAQTITRPISDMRRQAIEMAKGNYSRKVKVHSH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
DEIGQLALSFNNLSKKLQQARSSTESERRKLSSVLSHMTDGVIATDRKGDIILLNDPAEK
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCCCCEEEECCCHHH
MLNVSRETALDQSVLEVLGIQEEFTLDHLYEEPDSVLLDFSTRNEPYILRASFSVIQKET
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEEHHHHHHHHHC
GKANGLIAVLYDVTEQERIERERREFVANVSHELRTPLTTMRSYLEALTDGAWQDPNIAP
CCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCC
QFLTVTQEETERMIRLVNALLQLSKLDSTEHRLMKEWVDFTDFFNNIIDRFEMSKEQNVS
HHEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCH
FKRSFSKKSRFIDMDTDKITQVLYNIISNALKYSPEGGTVTYRLRDRGELLEISVSDQGM
HHHHHHHHHCEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCC
GIPKENVDKIFERFYRVDKARSRQMGGTGLGLAIAKEMIEAHGGSIWAKSEEGKGTTIYF
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCEEEE
TLPMAADEEDEWE
EECCCCCCCCCCC
>Mature Secondary Structure
MKKVGFFQSIHLKFVLIYMLLILIAMQVIGVYFVRELEKSLVQGFRDSLTQQTNLLSYNL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQEFKKSYTKAETESTDETIKTSIRKFASDRKKDIQEVSVFDANRKLLAISDESKQNKVN
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHCCCC
RTSTDIAVQRVLVQKKPEVKIEKDGRTGHRVQVMITPIMDDNNKDALGAIYVVASMEDVY
CHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHH
KQMKDINQIFATGTVIALLVTAVLGILLAQTITRPISDMRRQAIEMAKGNYSRKVKVHSH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
DEIGQLALSFNNLSKKLQQARSSTESERRKLSSVLSHMTDGVIATDRKGDIILLNDPAEK
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCCCCEEEECCCHHH
MLNVSRETALDQSVLEVLGIQEEFTLDHLYEEPDSVLLDFSTRNEPYILRASFSVIQKET
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEEHHHHHHHHHC
GKANGLIAVLYDVTEQERIERERREFVANVSHELRTPLTTMRSYLEALTDGAWQDPNIAP
CCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCC
QFLTVTQEETERMIRLVNALLQLSKLDSTEHRLMKEWVDFTDFFNNIIDRFEMSKEQNVS
HHEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCH
FKRSFSKKSRFIDMDTDKITQVLYNIISNALKYSPEGGTVTYRLRDRGELLEISVSDQGM
HHHHHHHHHCEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCC
GIPKENVDKIFERFYRVDKARSRQMGGTGLGLAIAKEMIEAHGGSIWAKSEEGKGTTIYF
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCEEEE
TLPMAADEEDEWE
EECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 9829949; 10878122; 11758928 [H]