Click here to switch to the map view.

The map label for this gene is yycH [H]

Identifier: 218906656

GI number: 218906656

Start: 5277793

End: 5279115

Strand: Reverse

Name: yycH [H]

Synonym: BCAH820_5570

Alternate gene names: 218906656

Gene position: 5279115-5277793 (Counterclockwise)

Preceding gene: 218906657

Following gene: 218906655

Centisome position: 99.56

GC content: 33.94

Gene sequence:

>1323_bases
ATGGGAATGAGTATGGAAAATGTTAAAACGATAGTTTTAATTAACTTAGTTGTAATTAGTCTATTTCTTACTTTTAACTT
ATGGACGTATGTGCCAGATTCCACGTCTATGCAAAACGCAAAATTTGTACAGGGGAATGAAGGAACTACTCAAACTAAAA
TCGCTGATGTTGTCCGCCCTACTTCTATCATCGTGCATAAAGATAAAAATCATTACGGGAGCAAAAGAGAGGGAGATATA
GAATCAATCTATAAACCTTTGGAAGCAGGGGAATTACATGAGTTCAAAGAGATATCGATTGCTAAGGCTGACTTCCTTCC
TTATGTGCATGGTGAAGGGAAAATTGAACTTATTTTCCCTACCAATATCCCATTTGATGCAGTTAAATCTATGTTTAGTA
TGAAAGAAAAAAGTATAGATAAGCCTAAACACTTTAATCGAATTATTCTTGACCCTTCTAGAAGTAGGGATCAAGAAATT
AAAATTAATTTTGTTTCCGATGGTGATAACTCTAGAATATATGAAGCAAAATTAAGTGGTGTGTATTTAAAAGATATTGT
AAATGCACAAAATCAATTTATAGTATCAGCGAAACCTTATTTTGACTATCAAATTAATGATATGAAAAAGCTATTTTTAC
CAGATGGAACGACAGAATTAAGTAATATAACATATATTTCATCTAATTTAGCGGTTGATACATTTAAGAATGCTCTTTTT
AGTGACCCACGTTATTTAAGCCCGATTACCGAGCAATCAAAAGAAATATTTACAGATGGTATTAGGTCTATGGAGATTGA
AAACAATCAGCATATGCTAAAGTATAAAAATTCTTCCGTTTTAAGTGAGAAAAAGCCAGATAATTTAATGCTTTTACAAA
AAAGTTTTGATTTTGTAAATGGTCACAGTGGAAGCTTGGATTCATATCGTTTGGACTATATGAATAAAGGACAGACAGTC
TTCCGCTTACAGGAAGATGGATATCCCGTATTTAATACAGATGGGTTAGCTGAATTGAGACAAGTATGGGGATCAGAAGA
AGTAATGGAATATGAAAGATCGTTGCTGTCTTTGAATACGAAAGGTATCGAACAGAAGGTTACTCTCCCATCAGGTCACG
TTGTAATAGCATCCTTAGAAAATAATGCGGCTGTAGATAAAAGATTCATTAAGGACATTGGGATTGGATACAAATTATCA
CTAGACGGACAAGTAGCGCGACTACAGCCGATTTGGTATGTAAAGTTTGTTGAAGATGAAGCTGGCAAACAAAAAATATA
TGAGTGGAGTGAGGGAGGACTAAATGGATTGGGATCGGATTAA

Upstream 100 bases:

>100_bases
TGATTGAGGCACATGGTGGCTCGATTTGGGCGAAGAGTGAAGAAGGAAAAGGGACAACGATTTATTTCACATTACCAATG
GCAGCGGATGAAGAGGACGA

Downstream 100 bases:

>100_bases
AACCATATTTATTGTGACCTTTTTTGTTTTGGATCTCTTTCTCATTTTTCAATTCATTCAAAAGCAAGATAGTAATCAAT
TGGAGCTTATTGCAGAAACA

Product: YycH protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 439

Protein sequence:

>440_residues
MGMSMENVKTIVLINLVVISLFLTFNLWTYVPDSTSMQNAKFVQGNEGTTQTKIADVVRPTSIIVHKDKNHYGSKREGDI
ESIYKPLEAGELHEFKEISIAKADFLPYVHGEGKIELIFPTNIPFDAVKSMFSMKEKSIDKPKHFNRIILDPSRSRDQEI
KINFVSDGDNSRIYEAKLSGVYLKDIVNAQNQFIVSAKPYFDYQINDMKKLFLPDGTTELSNITYISSNLAVDTFKNALF
SDPRYLSPITEQSKEIFTDGIRSMEIENNQHMLKYKNSSVLSEKKPDNLMLLQKSFDFVNGHSGSLDSYRLDYMNKGQTV
FRLQEDGYPVFNTDGLAELRQVWGSEEVMEYERSLLSLNTKGIEQKVTLPSGHVVIASLENNAAVDKRFIKDIGIGYKLS
LDGQVARLQPIWYVKFVEDEAGKQKIYEWSEGGLNGLGSD

Sequences:

>Translated_440_residues
MGMSMENVKTIVLINLVVISLFLTFNLWTYVPDSTSMQNAKFVQGNEGTTQTKIADVVRPTSIIVHKDKNHYGSKREGDI
ESIYKPLEAGELHEFKEISIAKADFLPYVHGEGKIELIFPTNIPFDAVKSMFSMKEKSIDKPKHFNRIILDPSRSRDQEI
KINFVSDGDNSRIYEAKLSGVYLKDIVNAQNQFIVSAKPYFDYQINDMKKLFLPDGTTELSNITYISSNLAVDTFKNALF
SDPRYLSPITEQSKEIFTDGIRSMEIENNQHMLKYKNSSVLSEKKPDNLMLLQKSFDFVNGHSGSLDSYRLDYMNKGQTV
FRLQEDGYPVFNTDGLAELRQVWGSEEVMEYERSLLSLNTKGIEQKVTLPSGHVVIASLENNAAVDKRFIKDIGIGYKLS
LDGQVARLQPIWYVKFVEDEAGKQKIYEWSEGGLNGLGSD
>Mature_439_residues
GMSMENVKTIVLINLVVISLFLTFNLWTYVPDSTSMQNAKFVQGNEGTTQTKIADVVRPTSIIVHKDKNHYGSKREGDIE
SIYKPLEAGELHEFKEISIAKADFLPYVHGEGKIELIFPTNIPFDAVKSMFSMKEKSIDKPKHFNRIILDPSRSRDQEIK
INFVSDGDNSRIYEAKLSGVYLKDIVNAQNQFIVSAKPYFDYQINDMKKLFLPDGTTELSNITYISSNLAVDTFKNALFS
DPRYLSPITEQSKEIFTDGIRSMEIENNQHMLKYKNSSVLSEKKPDNLMLLQKSFDFVNGHSGSLDSYRLDYMNKGQTVF
RLQEDGYPVFNTDGLAELRQVWGSEEVMEYERSLLSLNTKGIEQKVTLPSGHVVIASLENNAAVDKRFIKDIGIGYKLSL
DGQVARLQPIWYVKFVEDEAGKQKIYEWSEGGLNGLGSD

Specific function: Together with yycI, regulates the activity of the two- component system yycF/yycG [H]

COG id: COG4863

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009996 [H]

Pfam domain/function: PF07435 YycH [H]

EC number: NA

Molecular weight: Translated: 49950; Mature: 49819

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMSMENVKTIVLINLVVISLFLTFNLWTYVPDSTSMQNAKFVQGNEGTTQTKIADVVRP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEECCCCCCHHHHHHHHCC
TSIIVHKDKNHYGSKREGDIESIYKPLEAGELHEFKEISIAKADFLPYVHGEGKIELIFP
CEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHEEEHHHCCCEECCCCEEEEEEC
TNIPFDAVKSMFSMKEKSIDKPKHFNRIILDPSRSRDQEIKINFVSDGDNSRIYEAKLSG
CCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCEEEEEEECC
VYLKDIVNAQNQFIVSAKPYFDYQINDMKKLFLPDGTTELSNITYISSNLAVDTFKNALF
CHHHHHHCCCCCEEEEECCCCCEEECCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHH
SDPRYLSPITEQSKEIFTDGIRSMEIENNQHMLKYKNSSVLSEKKPDNLMLLQKSFDFVN
CCCCCCCCHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCC
GHSGSLDSYRLDYMNKGQTVFRLQEDGYPVFNTDGLAELRQVWGSEEVMEYERSLLSLNT
CCCCCCCCEEECCCCCCCEEEEEECCCCCEECCCCHHHHHHHHCCHHHHHHHHHHHHCCC
KGIEQKVTLPSGHVVIASLENNAAVDKRFIKDIGIGYKLSLDGQVARLQPIWYVKFVEDE
CCCCEEEECCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECCCCEEEECEEEEEEEECCC
AGKQKIYEWSEGGLNGLGSD
CCHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
GMSMENVKTIVLINLVVISLFLTFNLWTYVPDSTSMQNAKFVQGNEGTTQTKIADVVRP
CCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEECCCCCCHHHHHHHHCC
TSIIVHKDKNHYGSKREGDIESIYKPLEAGELHEFKEISIAKADFLPYVHGEGKIELIFP
CEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHEEEHHHCCCEECCCCEEEEEEC
TNIPFDAVKSMFSMKEKSIDKPKHFNRIILDPSRSRDQEIKINFVSDGDNSRIYEAKLSG
CCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCEEEEEEECC
VYLKDIVNAQNQFIVSAKPYFDYQINDMKKLFLPDGTTELSNITYISSNLAVDTFKNALF
CHHHHHHCCCCCEEEEECCCCCEEECCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHH
SDPRYLSPITEQSKEIFTDGIRSMEIENNQHMLKYKNSSVLSEKKPDNLMLLQKSFDFVN
CCCCCCCCHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCC
GHSGSLDSYRLDYMNKGQTVFRLQEDGYPVFNTDGLAELRQVWGSEEVMEYERSLLSLNT
CCCCCCCCEEECCCCCCCEEEEEECCCCCEECCCCHHHHHHHHCCHHHHHHHHHHHHCCC
KGIEQKVTLPSGHVVIASLENNAAVDKRFIKDIGIGYKLSLDGQVARLQPIWYVKFVEDE
CCCCEEEECCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECCCCEEEECEEEEEEEECCC
AGKQKIYEWSEGGLNGLGSD
CCHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]