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The map label for this gene is ylbC [H]

Identifier: 218905068

GI number: 218905068

Start: 3789137

End: 3790171

Strand: Reverse

Name: ylbC [H]

Synonym: BCAH820_3952

Alternate gene names: 218905068

Gene position: 3790171-3789137 (Counterclockwise)

Preceding gene: 218905070

Following gene: 218905067

Centisome position: 71.48

GC content: 35.07

Gene sequence:

>1035_bases
TTGAAGAAATTATTGCGTATCGTAATGATCACAATTTTAATTTTAGCTGTTGATTTATATGGGAAATTGCTCGTTTCACA
ATATATATTAACCCCATCTCAATCAAAGCAAGAAAATAAAATTGTAAAAAAGAAAAAACAAGTAAATGAAGATTCTTCCG
ATACTGTTTTAAATATGATTGGTGGGGACTCTGAAAATTTATTAGCAAAATGGGGCGAACCTTCTCGAATAGAACCATCT
GCTTATGGATATGAATGGTGGGTATACAATCAAGATTTAGCTCAGTATGTTCAATTTGGGGTTGCTGAACGTAAAGTTGT
AACGGCGTATGTTGCTGGTGAGCAAGTTAAGGTGCCACCTTATTATATAAATGAAAAGTATGAAGATGTGTATAAAAAGA
ATCCACTCTCGCATGAGATTTCATTAAAAAGAGGGAAGAATAGTTATCAATTTGAGTTATCTGATACCGAAGTGATGGAA
CAACCATTAGTACCAGTAGAAGATGGCTGGGCACAATTATATTTTGATCATTTTACGCATGAGCTTGTCGGTGTTCGTTA
TATGGATGACGAAACGTTATTACGCCAAAGACCGTATCAGCTCGTTTATTCGGGTGAATTATTAGCAGAACAACCATTAA
CTCCAGATAAAATGAAACAAATAGAGAATGGGAATATGCAACAAATTTTTGACTTAACAAATATTATTCGAAGTCGTCAT
AATTTACCGTTATTAGCTTGGGATCAACAAACAGCAGATGTAGCAATCGGTCATAGTAAAGATATGAAGGATAATAATTA
CTTTTCACACGACTCACCTACATTAGGTACGTTAGGAGATCGTTTGCAGCGTGGGAAAGTAGGATTTCAACTTGCGGGTG
AGAACATAGCGGCGCAACATAGTGATGGAGTTGCGGCATTGCAAGGTTGGTTAAATAGTGAGGGACATCGAAAGAATTTA
TTGAATGAACAATTTACAGGATTGGGTGTTGGAGTATACGATAAGTTTTATACACAAAATTTTATTCGAAAATAA

Upstream 100 bases:

>100_bases
GAAAATATGATATAGTGAAAAGAGTACGGTACACACAAAAAAGGAAAGAAAAGGATTTGTGTATATCTCAATTTTATGTT
TTGTGCAGGAGGTATATCGA

Downstream 100 bases:

>100_bases
AATGAAACTGTAAATTGTCGAGGGGAATCTTACCCTATGCAAATAGTAAGAAAAAAAGGTGCATGAATCGTCTGAAAATA
GGCGAACCATGCGCCTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MKKLLRIVMITILILAVDLYGKLLVSQYILTPSQSKQENKIVKKKKQVNEDSSDTVLNMIGGDSENLLAKWGEPSRIEPS
AYGYEWWVYNQDLAQYVQFGVAERKVVTAYVAGEQVKVPPYYINEKYEDVYKKNPLSHEISLKRGKNSYQFELSDTEVME
QPLVPVEDGWAQLYFDHFTHELVGVRYMDDETLLRQRPYQLVYSGELLAEQPLTPDKMKQIENGNMQQIFDLTNIIRSRH
NLPLLAWDQQTADVAIGHSKDMKDNNYFSHDSPTLGTLGDRLQRGKVGFQLAGENIAAQHSDGVAALQGWLNSEGHRKNL
LNEQFTGLGVGVYDKFYTQNFIRK

Sequences:

>Translated_344_residues
MKKLLRIVMITILILAVDLYGKLLVSQYILTPSQSKQENKIVKKKKQVNEDSSDTVLNMIGGDSENLLAKWGEPSRIEPS
AYGYEWWVYNQDLAQYVQFGVAERKVVTAYVAGEQVKVPPYYINEKYEDVYKKNPLSHEISLKRGKNSYQFELSDTEVME
QPLVPVEDGWAQLYFDHFTHELVGVRYMDDETLLRQRPYQLVYSGELLAEQPLTPDKMKQIENGNMQQIFDLTNIIRSRH
NLPLLAWDQQTADVAIGHSKDMKDNNYFSHDSPTLGTLGDRLQRGKVGFQLAGENIAAQHSDGVAALQGWLNSEGHRKNL
LNEQFTGLGVGVYDKFYTQNFIRK
>Mature_344_residues
MKKLLRIVMITILILAVDLYGKLLVSQYILTPSQSKQENKIVKKKKQVNEDSSDTVLNMIGGDSENLLAKWGEPSRIEPS
AYGYEWWVYNQDLAQYVQFGVAERKVVTAYVAGEQVKVPPYYINEKYEDVYKKNPLSHEISLKRGKNSYQFELSDTEVME
QPLVPVEDGWAQLYFDHFTHELVGVRYMDDETLLRQRPYQLVYSGELLAEQPLTPDKMKQIENGNMQQIFDLTNIIRSRH
NLPLLAWDQQTADVAIGHSKDMKDNNYFSHDSPTLGTLGDRLQRGKVGFQLAGENIAAQHSDGVAALQGWLNSEGHRKNL
LNEQFTGLGVGVYDKFYTQNFIRK

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014044 [H]

Pfam domain/function: PF00188 SCP [H]

EC number: NA

Molecular weight: Translated: 39445; Mature: 39445

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLRIVMITILILAVDLYGKLLVSQYILTPSQSKQENKIVKKKKQVNEDSSDTVLNMI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEHHH
GGDSENLLAKWGEPSRIEPSAYGYEWWVYNQDLAQYVQFGVAERKVVTAYVAGEQVKVPP
CCCCCHHHHCCCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCHHEEEEEECCCEEECCC
YYINEKYEDVYKKNPLSHEISLKRGKNSYQFELSDTEVMEQPLVPVEDGWAQLYFDHFTH
CEECCHHHHHHHCCCCCCEEEHCCCCCCEEEEECCHHHHHCCCCCCCCCHHHHHHHHHHH
ELVGVRYMDDETLLRQRPYQLVYSGELLAEQPLTPDKMKQIENGNMQQIFDLTNIIRSRH
HHHCEEECCCHHHHHCCCCEEEECCCHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCC
NLPLLAWDQQTADVAIGHSKDMKDNNYFSHDSPTLGTLGDRLQRGKVGFQLAGENIAAQH
CCCEEEECCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCC
SDGVAALQGWLNSEGHRKNLLNEQFTGLGVGVYDKFYTQNFIRK
CCCHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKLLRIVMITILILAVDLYGKLLVSQYILTPSQSKQENKIVKKKKQVNEDSSDTVLNMI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEHHH
GGDSENLLAKWGEPSRIEPSAYGYEWWVYNQDLAQYVQFGVAERKVVTAYVAGEQVKVPP
CCCCCHHHHCCCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCHHEEEEEECCCEEECCC
YYINEKYEDVYKKNPLSHEISLKRGKNSYQFELSDTEVMEQPLVPVEDGWAQLYFDHFTH
CEECCHHHHHHHCCCCCCEEEHCCCCCCEEEEECCHHHHHCCCCCCCCCHHHHHHHHHHH
ELVGVRYMDDETLLRQRPYQLVYSGELLAEQPLTPDKMKQIENGNMQQIFDLTNIIRSRH
HHHCEEECCCHHHHHCCCCEEEECCCHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCC
NLPLLAWDQQTADVAIGHSKDMKDNNYFSHDSPTLGTLGDRLQRGKVGFQLAGENIAAQH
CCCEEEECCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCC
SDGVAALQGWLNSEGHRKNLLNEQFTGLGVGVYDKFYTQNFIRK
CCCHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]