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The map label for this gene is spoIIGA

Identifier: 218905036

GI number: 218905036

Start: 3757059

End: 3757976

Strand: Reverse

Name: spoIIGA

Synonym: BCAH820_3920

Alternate gene names: NA

Gene position: 3757976-3757059 (Counterclockwise)

Preceding gene: 218905037

Following gene: 218905035

Centisome position: 70.87

GC content: 34.1

Gene sequence:

>918_bases
TTGGTTGTTTACGCCGACGTTGTTTGGTTGTTAAACGCCTGCATTGATTTTCTTTTACTTTTATTAACAGCTACCGTGTT
AAAAAAGAAGATCAAAAGATGGAGGCTTGTGTTAGGGGCATTTATAGGTTCAACCATTGTTATTTTTGCCTTTACTCCTT
TTGCTTCTATGATGACACATCCGATTATGAAACTACTGTACTCGTTACTTATCGTGTATACAGCATTTGGGTTTACAACA
TTTAGAAATTATACACAAACTGTTTTTACTTTTTACTTTGTAACCTTTATGGTTGGCGGAGGATTAATGGGCACTCATTT
CTTTTTGCAAACGAATGAAATGGTAAATGGGTTGGCTCAATCTCAATCAATTTCTTACGGTGACCCAATTGGTTGGTTGT
TCGTTATTTTTGGTTTTCCAGTCATTTATTATTTTTCTAAAAAGCGTATTGAAAGCGTAGAGGTTACAAAAATACACTAT
GATCAAATTGTGAAATTGAAAATTCAATTAGCTGAAGAGGAACTAGAACTCGCAGGTTTAATTGATAGTGGGAATCAACT
TTACGACCCGTTAACGAAAACACCTGTTATGATTATGCATATTTCATCATTAGAACATTGTTTGCCAGCTTGGTTAACAG
AACAAATTTATTCCAAAACAGAGATTCCTCAAATACCAGAAAATGATTCTGGGTGGGCGACAAAATTACGCTTAATTCCT
TTTCGAGCAGTAGGAGTAGAGAATCAATTTTTATGGGCAATTAAGCCAGAAAGTGTACAAATTTATCATGAAGGTAGTTC
TATTGTCGTGAATAAAGTATTGATTGGATTAAATACACAACAGTTGTCAACCAATGGAGAGTATCAATGTATTGTGCATC
CAAAAATGTTGATTTCGCAAAAAATGGTAATTGCTTAA

Upstream 100 bases:

>100_bases
AGAAAGCACAAAATAACAAAAAAACACCTCCGCAAATTGACACACTTTCCTATTGGATATGCATTATACTAGTCTCAACT
TAAAAAAAGAGGTGAATTGT

Downstream 100 bases:

>100_bases
TAATGGGAGGCGGGATAATATGATGAAATTAAAATTTTATTTAGTATACCTTTGGTATAAAGTATTGTTGAAATTAGGAA
TTAAGACCGATGAAATTTAT

Product: sporulation sigma-E factor processing peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MVVYADVVWLLNACIDFLLLLLTATVLKKKIKRWRLVLGAFIGSTIVIFAFTPFASMMTHPIMKLLYSLLIVYTAFGFTT
FRNYTQTVFTFYFVTFMVGGGLMGTHFFLQTNEMVNGLAQSQSISYGDPIGWLFVIFGFPVIYYFSKKRIESVEVTKIHY
DQIVKLKIQLAEEELELAGLIDSGNQLYDPLTKTPVMIMHISSLEHCLPAWLTEQIYSKTEIPQIPENDSGWATKLRLIP
FRAVGVENQFLWAIKPESVQIYHEGSSIVVNKVLIGLNTQQLSTNGEYQCIVHPKMLISQKMVIA

Sequences:

>Translated_305_residues
MVVYADVVWLLNACIDFLLLLLTATVLKKKIKRWRLVLGAFIGSTIVIFAFTPFASMMTHPIMKLLYSLLIVYTAFGFTT
FRNYTQTVFTFYFVTFMVGGGLMGTHFFLQTNEMVNGLAQSQSISYGDPIGWLFVIFGFPVIYYFSKKRIESVEVTKIHY
DQIVKLKIQLAEEELELAGLIDSGNQLYDPLTKTPVMIMHISSLEHCLPAWLTEQIYSKTEIPQIPENDSGWATKLRLIP
FRAVGVENQFLWAIKPESVQIYHEGSSIVVNKVLIGLNTQQLSTNGEYQCIVHPKMLISQKMVIA
>Mature_305_residues
MVVYADVVWLLNACIDFLLLLLTATVLKKKIKRWRLVLGAFIGSTIVIFAFTPFASMMTHPIMKLLYSLLIVYTAFGFTT
FRNYTQTVFTFYFVTFMVGGGLMGTHFFLQTNEMVNGLAQSQSISYGDPIGWLFVIFGFPVIYYFSKKRIESVEVTKIHY
DQIVKLKIQLAEEELELAGLIDSGNQLYDPLTKTPVMIMHISSLEHCLPAWLTEQIYSKTEIPQIPENDSGWATKLRLIP
FRAVGVENQFLWAIKPESVQIYHEGSSIVVNKVLIGLNTQQLSTNGEYQCIVHPKMLISQKMVIA

Specific function: Probably activates the RNA polymerase sigma-35 factor at the stage II of sporulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005081 [H]

Pfam domain/function: PF03419 Peptidase_U4 [H]

EC number: NA

Molecular weight: Translated: 34704; Mature: 34704

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVYADVVWLLNACIDFLLLLLTATVLKKKIKRWRLVLGAFIGSTIVIFAFTPFASMMTH
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHH
PIMKLLYSLLIVYTAFGFTTFRNYTQTVFTFYFVTFMVGGGLMGTHFFLQTNEMVNGLAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEECHHHHHHHHH
SQSISYGDPIGWLFVIFGFPVIYYFSKKRIESVEVTKIHYDQIVKLKIQLAEEELELAGL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHEEEHHEEHHHHHHHHHHE
IDSGNQLYDPLTKTPVMIMHISSLEHCLPAWLTEQIYSKTEIPQIPENDSGWATKLRLIP
ECCCCHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEE
FRAVGVENQFLWAIKPESVQIYHEGSSIVVNKVLIGLNTQQLSTNGEYQCIVHPKMLISQ
EEEECCCCCEEEEECCCCEEEEECCCEEEEEHHHEECCHHHCCCCCCEEEEECHHHHHCC
KMVIA
HHHCC
>Mature Secondary Structure
MVVYADVVWLLNACIDFLLLLLTATVLKKKIKRWRLVLGAFIGSTIVIFAFTPFASMMTH
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHH
PIMKLLYSLLIVYTAFGFTTFRNYTQTVFTFYFVTFMVGGGLMGTHFFLQTNEMVNGLAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEECHHHHHHHHH
SQSISYGDPIGWLFVIFGFPVIYYFSKKRIESVEVTKIHYDQIVKLKIQLAEEELELAGL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHEEEHHEEHHHHHHHHHHE
IDSGNQLYDPLTKTPVMIMHISSLEHCLPAWLTEQIYSKTEIPQIPENDSGWATKLRLIP
ECCCCHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEE
FRAVGVENQFLWAIKPESVQIYHEGSSIVVNKVLIGLNTQQLSTNGEYQCIVHPKMLISQ
EEEECCCCCEEEEECCCCEEEEECCCEEEEEHHHEECCHHHCCCCCCEEEEECHHHHHCC
KMVIA
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1904859 [H]