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The map label for this gene is sun [H]

Identifier: 218904995

GI number: 218904995

Start: 3716126

End: 3717460

Strand: Reverse

Name: sun [H]

Synonym: BCAH820_3879

Alternate gene names: 218904995

Gene position: 3717460-3716126 (Counterclockwise)

Preceding gene: 218904996

Following gene: 218904994

Centisome position: 70.11

GC content: 36.63

Gene sequence:

>1335_bases
ATGAGACAAAATGTTCGTGAATTAGCTCTTGATGGTTTAATTCAAGTAGAAAAAAGTGGTGCATACAGTAACTTACTTTT
AAATAATCTAATTGAAAAAAGTACAATTGATAGAAAAGATATTGGTTTATTAACTGAAATTGTATATGGAACAATCCAAC
GTCGTGACACATTAGATTATTATTTACAGCCTTTTTTAAAAAAGAAAGTTGAAGCATGGGTAAGAGTATTACTTCGCTTA
TCTTTATATCAAATGATTTATTTAGACCGAGTGCCCGAAAGAGCGGCTATTCATGAAGCGGTTGAGATTGCAAAGCGTCG
CGGACATAAAGGCATTGCTGGTATGGTAAACGGTGTATTACGTTCGATTCAAAGAGAAGGTGTACCTTCTGTAGATGAAA
TCAAAGATCCAGTAGAACGTTTGGCAATTGCAACAAGTCATCCAGTTTGGCTTGTTCAAGAGTGGACTGCTGAATATGGT
TTAGAAACTGCTGAGAAAATGTGTGAAGTGAACATGTTACCGCCTGTACCAACAGCGCGTGTAAATGTTGATAAAATAAC
AGTAGAAGAAGCAATTACATTATTGGCTAGTGAAGGTATAGAAGCGAAGCGTGGCGATTTATCAGATGATGCAATTCAAA
TTGAAAAAGGAAATGTAGCGCACACAGATGCGTTTAAAAAAGGTTTTCTTTCTATTCAAGATGAAAGTTCTATGCTGGTA
GCACGCGCTCTAGAACCAGATGAGGGAGATGTAATTCTTGATAGTTGTGCTGCTCCAGGCGGAAAAACAACGCATATTGC
AGAGCGATTAAAAGGAACTGGTCAAGTCATGTCCCTTGATTTACATGCACACAAAGTACGCTTAATTAAACAACAAGCAG
AGCGACTTGGTCTAGAAAATGTCGAAACTAAGGCATTAGATGCTAGAAAAGTGCAAGAACACTTTGCAAATGAAACATTT
GATAAAATATTAGTAGATGCCCCATGTTCTGGATTTGGTGTAATTAGACGTAAGCCTGATATTAAGTTAGGTAAAGATAA
AGGCGATAGTGAAAGATTATCGATGATCCAATTTGCAATACTAGAAAAAATCGCACCGTTATTAAAACAAGGTGGTCGCC
TTGTTTATAGTACGTGCACAATTGAGAAAATAGAAAATGAACAAGTAATAGAACGATTTTTACAAGAGCATCCGGAGTTT
GAGTGGGATACTACGATAAAAGAGCGTATGCCAGAAAAGCTAAGTCCGTATATGGATGAAGGTCAAGTACAAATTTTACC
GCATTATTTTGCAACAGATGGCTTTTATATTGCTTGTTTAAGGAAGAAGGTGTAG

Upstream 100 bases:

>100_bases
AAATTACTGAATTGCAACCTTCTGGTAAAAAGCGTATGAGTTGTTCGCAATTTTTACGTGGCACAAAACCTGAAATTGGA
ACGAAGTTAGGAGAAAATGC

Downstream 100 bases:

>100_bases
CATCGTGGAAACGACTGTGAGAAAACAAAAGAAAAACTTAGAAACGAAAAAACCATCAATTTATTCTTTACAACTTCATG
AAATGCAAGATTGGTTAAAG

Product: sun protein

Products: NA

Alternate protein names: rRNA (cytosine-C(5)-)-methyltransferase rsmB [H]

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MRQNVRELALDGLIQVEKSGAYSNLLLNNLIEKSTIDRKDIGLLTEIVYGTIQRRDTLDYYLQPFLKKKVEAWVRVLLRL
SLYQMIYLDRVPERAAIHEAVEIAKRRGHKGIAGMVNGVLRSIQREGVPSVDEIKDPVERLAIATSHPVWLVQEWTAEYG
LETAEKMCEVNMLPPVPTARVNVDKITVEEAITLLASEGIEAKRGDLSDDAIQIEKGNVAHTDAFKKGFLSIQDESSMLV
ARALEPDEGDVILDSCAAPGGKTTHIAERLKGTGQVMSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQEHFANETF
DKILVDAPCSGFGVIRRKPDIKLGKDKGDSERLSMIQFAILEKIAPLLKQGGRLVYSTCTIEKIENEQVIERFLQEHPEF
EWDTTIKERMPEKLSPYMDEGQVQILPHYFATDGFYIACLRKKV

Sequences:

>Translated_444_residues
MRQNVRELALDGLIQVEKSGAYSNLLLNNLIEKSTIDRKDIGLLTEIVYGTIQRRDTLDYYLQPFLKKKVEAWVRVLLRL
SLYQMIYLDRVPERAAIHEAVEIAKRRGHKGIAGMVNGVLRSIQREGVPSVDEIKDPVERLAIATSHPVWLVQEWTAEYG
LETAEKMCEVNMLPPVPTARVNVDKITVEEAITLLASEGIEAKRGDLSDDAIQIEKGNVAHTDAFKKGFLSIQDESSMLV
ARALEPDEGDVILDSCAAPGGKTTHIAERLKGTGQVMSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQEHFANETF
DKILVDAPCSGFGVIRRKPDIKLGKDKGDSERLSMIQFAILEKIAPLLKQGGRLVYSTCTIEKIENEQVIERFLQEHPEF
EWDTTIKERMPEKLSPYMDEGQVQILPHYFATDGFYIACLRKKV
>Mature_444_residues
MRQNVRELALDGLIQVEKSGAYSNLLLNNLIEKSTIDRKDIGLLTEIVYGTIQRRDTLDYYLQPFLKKKVEAWVRVLLRL
SLYQMIYLDRVPERAAIHEAVEIAKRRGHKGIAGMVNGVLRSIQREGVPSVDEIKDPVERLAIATSHPVWLVQEWTAEYG
LETAEKMCEVNMLPPVPTARVNVDKITVEEAITLLASEGIEAKRGDLSDDAIQIEKGNVAHTDAFKKGFLSIQDESSMLV
ARALEPDEGDVILDSCAAPGGKTTHIAERLKGTGQVMSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQEHFANETF
DKILVDAPCSGFGVIRRKPDIKLGKDKGDSERLSMIQFAILEKIAPLLKQGGRLVYSTCTIEKIENEQVIERFLQEHPEF
EWDTTIKERMPEKLSPYMDEGQVQILPHYFATDGFYIACLRKKV

Specific function: Unknown

COG id: COG0144

COG function: function code J; tRNA and rRNA cytosine-C5-methylases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmB/NOP family [H]

Homologues:

Organism=Homo sapiens, GI76150625, Length=357, Percent_Identity=31.0924369747899, Blast_Score=132, Evalue=4e-31,
Organism=Homo sapiens, GI76150623, Length=357, Percent_Identity=31.0924369747899, Blast_Score=132, Evalue=4e-31,
Organism=Homo sapiens, GI32698918, Length=181, Percent_Identity=38.6740331491713, Blast_Score=115, Evalue=7e-26,
Organism=Homo sapiens, GI39995082, Length=275, Percent_Identity=29.8181818181818, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI301336155, Length=275, Percent_Identity=29.8181818181818, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI23199998, Length=297, Percent_Identity=27.2727272727273, Blast_Score=90, Evalue=5e-18,
Organism=Homo sapiens, GI8922322, Length=297, Percent_Identity=27.2727272727273, Blast_Score=89, Evalue=6e-18,
Organism=Homo sapiens, GI270288818, Length=233, Percent_Identity=29.6137339055794, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI270288816, Length=233, Percent_Identity=29.6137339055794, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI11545785, Length=173, Percent_Identity=34.1040462427746, Blast_Score=86, Evalue=9e-17,
Organism=Homo sapiens, GI40316918, Length=197, Percent_Identity=27.4111675126904, Blast_Score=72, Evalue=1e-12,
Organism=Escherichia coli, GI2367212, Length=446, Percent_Identity=32.5112107623318, Blast_Score=200, Evalue=1e-52,
Organism=Escherichia coli, GI87081985, Length=271, Percent_Identity=31.7343173431734, Blast_Score=136, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI17536757, Length=243, Percent_Identity=34.5679012345679, Blast_Score=119, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI71998419, Length=228, Percent_Identity=32.0175438596491, Blast_Score=95, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI115534021, Length=228, Percent_Identity=32.0175438596491, Blast_Score=95, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI25143471, Length=180, Percent_Identity=33.8888888888889, Blast_Score=88, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6324268, Length=308, Percent_Identity=29.5454545454545, Blast_Score=116, Evalue=8e-27,
Organism=Saccharomyces cerevisiae, GI6319447, Length=185, Percent_Identity=34.0540540540541, Blast_Score=93, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6324306, Length=216, Percent_Identity=26.3888888888889, Blast_Score=71, Evalue=4e-13,
Organism=Drosophila melanogaster, GI22024126, Length=227, Percent_Identity=33.4801762114537, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI21355201, Length=282, Percent_Identity=29.4326241134752, Blast_Score=105, Evalue=5e-23,
Organism=Drosophila melanogaster, GI24668781, Length=234, Percent_Identity=32.4786324786325, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI21356513, Length=234, Percent_Identity=32.4786324786325, Blast_Score=99, Evalue=5e-21,
Organism=Drosophila melanogaster, GI21356579, Length=232, Percent_Identity=28.8793103448276, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI19920494, Length=210, Percent_Identity=32.8571428571429, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001678
- InterPro:   IPR018314
- InterPro:   IPR006027
- InterPro:   IPR004573 [H]

Pfam domain/function: PF01189 Nol1_Nop2_Fmu; PF01029 NusB [H]

EC number: 2.1.1.-

Molecular weight: Translated: 50079; Mature: 50079

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: PS01153 NOL1_NOP2_SUN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQNVRELALDGLIQVEKSGAYSNLLLNNLIEKSTIDRKDIGLLTEIVYGTIQRRDTLDY
CCCCHHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHH
YLQPFLKKKVEAWVRVLLRLSLYQMIYLDRVPERAAIHEAVEIAKRRGHKGIAGMVNGVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RSIQREGVPSVDEIKDPVERLAIATSHPVWLVQEWTAEYGLETAEKMCEVNMLPPVPTAR
HHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCHHHHHHHHHCCCCCCCCCCC
VNVDKITVEEAITLLASEGIEAKRGDLSDDAIQIEKGNVAHTDAFKKGFLSIQDESSMLV
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCEEECCCCCEEH
ARALEPDEGDVILDSCAAPGGKTTHIAERLKGTGQVMSLDLHAHKVRLIKQQAERLGLEN
HCCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCC
VETKALDARKVQEHFANETFDKILVDAPCSGFGVIRRKPDIKLGKDKGDSERLSMIQFAI
CHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHH
LEKIAPLLKQGGRLVYSTCTIEKIENEQVIERFLQEHPEFEWDTTIKERMPEKLSPYMDE
HHHHHHHHHHCCEEEEEEEHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHCCHHCCCCCCC
GQVQILPHYFATDGFYIACLRKKV
CCEEEECHHHCCCCEEEEEECCCC
>Mature Secondary Structure
MRQNVRELALDGLIQVEKSGAYSNLLLNNLIEKSTIDRKDIGLLTEIVYGTIQRRDTLDY
CCCCHHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHH
YLQPFLKKKVEAWVRVLLRLSLYQMIYLDRVPERAAIHEAVEIAKRRGHKGIAGMVNGVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RSIQREGVPSVDEIKDPVERLAIATSHPVWLVQEWTAEYGLETAEKMCEVNMLPPVPTAR
HHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCHHHHHHHHHCCCCCCCCCCC
VNVDKITVEEAITLLASEGIEAKRGDLSDDAIQIEKGNVAHTDAFKKGFLSIQDESSMLV
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCEEECCCCCEEH
ARALEPDEGDVILDSCAAPGGKTTHIAERLKGTGQVMSLDLHAHKVRLIKQQAERLGLEN
HCCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCC
VETKALDARKVQEHFANETFDKILVDAPCSGFGVIRRKPDIKLGKDKGDSERLSMIQFAI
CHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHH
LEKIAPLLKQGGRLVYSTCTIEKIENEQVIERFLQEHPEFEWDTTIKERMPEKLSPYMDE
HHHHHHHHHHCCEEEEEEEHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHCCHHCCCCCCC
GQVQILPHYFATDGFYIACLRKKV
CCEEEECHHHCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377; 9086272 [H]