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The map label for this gene is smF [H]

Identifier: 218904962

GI number: 218904962

Start: 3685413

End: 3686282

Strand: Reverse

Name: smF [H]

Synonym: BCAH820_3846

Alternate gene names: 218904962

Gene position: 3686282-3685413 (Counterclockwise)

Preceding gene: 218904963

Following gene: 218904961

Centisome position: 69.52

GC content: 32.64

Gene sequence:

>870_bases
ATGAAAAGAGAACGATTATTACATCTTCATTATTTGTTAGCAGACCATTGGAAGGCGATAGAGAGGCTATTACATGTCGA
TCCAGAATTGAAGGGAATATACACTTTTAATGCAAAACAAATGGAATGTTACACTGGAATATCCTCGAAAAAATCTTCAG
AATTAGTAAATTTTCTTCAAAGTTCAAATCTCCCGCAATATATATCTTATTTAAAGAAAAATCGAATTTTTTATATGACA
ATATGGGATAAAGATTATCCAAAATTATTACGTGAAATACAAGATCCGCCCTTCGTATTATATGGAAAAGGAGAGAAGGA
TTTTCTCAATAAAGCGAATAAATTAGCGGTTGTTGGAACGAGAGAACCAACTTTATATGGACATGAGAGTTTAAAATTTA
TTTTACATCCATTATTAGAAAAGGAATGGCTTATTGTCAGTGGATTTGCAAGAGGGATAGATACGATGTCTCATGAAATT
ACAGTAAGACGGTATTGTCCAACAATTGCGATACTAGGACATGGATTATCGTATATATATCCAAAAGAGAATCGATATTT
ATATGAAGCGTGGAATGAATATATATTGTTATTAACAGAGTATCCTCCGCACTATGCACCAAAAAAATGGTATTTTCCAA
AAAGGAATCGAATTATTAGTGGTATAAGTAAAGGTGTTTTAGTTGTAGAAGCGAAATCGAGAAGCGGAACACTTATTACT
GCAGACCTTGCTCTAGAGCAAAATAGAGAGGTATTTGCACTTCCTGGACCTATATTTACAGATAGTGCATCAGGAACAAA
TCATCTTATTCAACAAGGAGCGAAACTAKKAAGAAATGCMGAAGATATACTAGAAGAGATTTTAAATTAA

Upstream 100 bases:

>100_bases
TAAAAACTACTAATCTGTTGAAAGACACCTTCTTGCTTGAAGGTGTCTTTTTACAAACTTCCTGTTTACATAATAAAAAT
TATGGGTAAGGAGAATTGAG

Downstream 100 bases:

>100_bases
TCTTATATTTTTATGTTTTTATTAAACAATTATTGACAAATGGTAGATAGGCACTGTATGGTATATTCATTCTTGATTGA
CAAAAACAAGAGAAATCAAT

Product: DNA processing Smf protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MKRERLLHLHYLLADHWKAIERLLHVDPELKGIYTFNAKQMECYTGISSKKSSELVNFLQSSNLPQYISYLKKNRIFYMT
IWDKDYPKLLREIQDPPFVLYGKGEKDFLNKANKLAVVGTREPTLYGHESLKFILHPLLEKEWLIVSGFARGIDTMSHEI
TVRRYCPTIAILGHGLSYIYPKENRYLYEAWNEYILLLTEYPPHYAPKKWYFPKRNRIISGISKGVLVVEAKSRSGTLIT
ADLALEQNREVFALPGPIFTDSASGTNHLIQQGAKLXRNAEDILEEILN

Sequences:

>Translated_289_residues
MKRERLLHLHYLLADHWKAIERLLHVDPELKGIYTFNAKQMECYTGISSKKSSELVNFLQSSNLPQYISYLKKNRIFYMT
IWDKDYPKLLREIQDPPFVLYGKGEKDFLNKANKLAVVGTREPTLYGHESLKFILHPLLEKEWLIVSGFARGIDTMSHEI
TVRRYCPTIAILGHGLSYIYPKENRYLYEAWNEYILLLTEYPPHYAPKKWYFPKRNRIISGISKGVLVVEAKSRSGTLIT
ADLALEQNREVFALPGPIFTDSASGTNHLIQQGAKLXRNAEDILEEILN
>Mature_289_residues
MKRERLLHLHYLLADHWKAIERLLHVDPELKGIYTFNAKQMECYTGISSKKSSELVNFLQSSNLPQYISYLKKNRIFYMT
IWDKDYPKLLREIQDPPFVLYGKGEKDFLNKANKLAVVGTREPTLYGHESLKFILHPLLEKEWLIVSGFARGIDTMSHEI
TVRRYCPTIAILGHGLSYIYPKENRYLYEAWNEYILLLTEYPPHYAPKKWYFPKRNRIISGISKGVLVVEAKSRSGTLIT
ADLALEQNREVFALPGPIFTDSASGTNHLIQQGAKLXRNAEDILEEILN

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=244, Percent_Identity=38.9344262295082, Blast_Score=155, Evalue=4e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 33475; Mature: 33475

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRERLLHLHYLLADHWKAIERLLHVDPELKGIYTFNAKQMECYTGISSKKSSELVNFLQ
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHH
SSNLPQYISYLKKNRIFYMTIWDKDYPKLLREIQDPPFVLYGKGEKDFLNKANKLAVVGT
HCCCHHHHHHHHHCCEEEEEEECCCHHHHHHHHCCCCEEEEECCCHHHHCCCCCEEEEEC
REPTLYGHESLKFILHPLLEKEWLIVSGFARGIDTMSHEITVRRYCPTIAILGHGLSYIY
CCCCEECHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHEEEHHHCCCCEEHHCCCEEEE
PKENRYLYEAWNEYILLLTEYPPHYAPKKWYFPKRNRIISGISKGVLVVEAKSRSGTLIT
ECCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCEEE
ADLALEQNREVFALPGPIFTDSASGTNHLIQQGAKLXRNAEDILEEILN
EEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCC
>Mature Secondary Structure
MKRERLLHLHYLLADHWKAIERLLHVDPELKGIYTFNAKQMECYTGISSKKSSELVNFLQ
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHH
SSNLPQYISYLKKNRIFYMTIWDKDYPKLLREIQDPPFVLYGKGEKDFLNKANKLAVVGT
HCCCHHHHHHHHHCCEEEEEEECCCHHHHHHHHCCCCEEEEECCCHHHHCCCCCEEEEEC
REPTLYGHESLKFILHPLLEKEWLIVSGFARGIDTMSHEITVRRYCPTIAILGHGLSYIY
CCCCEECHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHEEEHHHCCCCEEHHCCCEEEE
PKENRYLYEAWNEYILLLTEYPPHYAPKKWYFPKRNRIISGISKGVLVVEAKSRSGTLIT
ECCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCEEE
ADLALEQNREVFALPGPIFTDSASGTNHLIQQGAKLXRNAEDILEEILN
EEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]