Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
---|---|
Accession | NC_011766 |
Length | 1,365,223 |
Click here to switch to the map view.
The map label for this gene is ahcY [H]
Identifier: 218884566
GI number: 218884566
Start: 1174292
End: 1175563
Strand: Direct
Name: ahcY [H]
Synonym: DKAM_1255
Alternate gene names: 218884566
Gene position: 1174292-1175563 (Clockwise)
Preceding gene: 218884563
Following gene: 218884567
Centisome position: 86.01
GC content: 47.09
Gene sequence:
>1272_bases GTGAGGGTGGATTATATGGAGTATAAGGTTAAAGATCTCGCTCTAGCTCCACAGGGGAATGCGAAGATCTCCTGGGCTGA GCAAAACATGCCGGTATTGATGCTGCTGAGGAAACGGCACAGTGCTTTAAAACCCCTTAAAGGAGTTAGGGTTGGCGCCG TCCTTCATGTAACCAAGGAGACGGCTGTATTAATGAAGGCATTCGTTGATGCGGGGGCAGAGGTCGTGTTAGCTGGAAGT AATCCGCTTTCAACACAGGACGATATAGCGGCTGCCCTAGTCGAATACGGTGTACACGTGTATGCCTGGAGAGGGCAGTC CTCCAGTGAATACTACTGGTGCCTTGAGAAAATAATTGAGTGGAGGCCGCAAATAGTATTGGATGATGGTGCTGATCTCC ACGCCTTAATACATGAGAAACACCTAGACCTTGCTGAACAAATAATCGGTGGTACAGAGGAGACTACTACAGGGGTTATA AGGCTTAAAGCCTTGGAGAGAGAAGGGCTACTTAAATACCCTGTGATAGCCGTGAATAATGCCTATACAAAGCACATGTT CGACAATAGGTATGGAACCGGGCAGAGCACCTTCGATGGAATACTTAGAGCCACCAACATCCTTATAGCTGGAAAAATAG TTGTAGTAGCTGGTTATGGCTGGGTTGGTAAAGGCATAGCGATGAGAGCCAGGGGTCTTGGAGCCAGAAGAGTCATAGTC ACAGAGGTCAATCCCATAAGGGCTCTTGAAGCAATATATGATGGCTTCGAGGTAATGCCCATGAGTGAAGCCGCTGAGAT AGGCGATATATTCATAACTGCAACCGGTAATAAAGCTGTTATAAGGAGGGAGCACTTCGAGAAAATGAAGAATGGGGCTA TCTTGGCTAATGCTGGACATTTCAATGTAGAGGTATGGATACCGGATCTAGAGGAGTTAGCAAGGTCTAAGAGACATGTG CTACCATATGTTACAGAGTATGAGTTAAGGGATGGGAGAAAGATATATCTACTGGCTGAGGGGAGACTCGTAAACCTCGT GGCAGCCGAGGGGCATCCAAGTGAGGTCATGGATATGAGCTTTGCCAACCAGTTCTTAGCCTCACTATACCTTATGGATA ACAAGGGTAAGCTGCCCTTAAGGGTCATGAATCCACCGCTTGAGCTAGATGAAATGGTTGCATCGCTGAAACTGGAGTCG ATGAGTGTGAGAATAGACTCGATGACGCGTGAGCAGGAGGAGTATGTTAAATCATGGAGGCATGGAACTTGA
Upstream 100 bases:
>100_bases GTATGTGCTGATGAAGCGTCTGCGTTTCCCTGCTTGCTTCAACCTGGTTGAGATAAACCTCATATTTAAAGCGATACATG GATTCTAAACTATTATAGCC
Downstream 100 bases:
>100_bases CCACCTGGTGTACTCTATGGGCTTCATTAAGCGTAAACCCAGCGATAGGGAGCTAGATGAGTTAAGATGGATCGCTAAAA TACAGTTCGGCGTAGGCAGA
Product: adenosylhomocysteinase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase [H]
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MRVDYMEYKVKDLALAPQGNAKISWAEQNMPVLMLLRKRHSALKPLKGVRVGAVLHVTKETAVLMKAFVDAGAEVVLAGS NPLSTQDDIAAALVEYGVHVYAWRGQSSSEYYWCLEKIIEWRPQIVLDDGADLHALIHEKHLDLAEQIIGGTEETTTGVI RLKALEREGLLKYPVIAVNNAYTKHMFDNRYGTGQSTFDGILRATNILIAGKIVVVAGYGWVGKGIAMRARGLGARRVIV TEVNPIRALEAIYDGFEVMPMSEAAEIGDIFITATGNKAVIRREHFEKMKNGAILANAGHFNVEVWIPDLEELARSKRHV LPYVTEYELRDGRKIYLLAEGRLVNLVAAEGHPSEVMDMSFANQFLASLYLMDNKGKLPLRVMNPPLELDEMVASLKLES MSVRIDSMTREQEEYVKSWRHGT
Sequences:
>Translated_423_residues MRVDYMEYKVKDLALAPQGNAKISWAEQNMPVLMLLRKRHSALKPLKGVRVGAVLHVTKETAVLMKAFVDAGAEVVLAGS NPLSTQDDIAAALVEYGVHVYAWRGQSSSEYYWCLEKIIEWRPQIVLDDGADLHALIHEKHLDLAEQIIGGTEETTTGVI RLKALEREGLLKYPVIAVNNAYTKHMFDNRYGTGQSTFDGILRATNILIAGKIVVVAGYGWVGKGIAMRARGLGARRVIV TEVNPIRALEAIYDGFEVMPMSEAAEIGDIFITATGNKAVIRREHFEKMKNGAILANAGHFNVEVWIPDLEELARSKRHV LPYVTEYELRDGRKIYLLAEGRLVNLVAAEGHPSEVMDMSFANQFLASLYLMDNKGKLPLRVMNPPLELDEMVASLKLES MSVRIDSMTREQEEYVKSWRHGT >Mature_423_residues MRVDYMEYKVKDLALAPQGNAKISWAEQNMPVLMLLRKRHSALKPLKGVRVGAVLHVTKETAVLMKAFVDAGAEVVLAGS NPLSTQDDIAAALVEYGVHVYAWRGQSSSEYYWCLEKIIEWRPQIVLDDGADLHALIHEKHLDLAEQIIGGTEETTTGVI RLKALEREGLLKYPVIAVNNAYTKHMFDNRYGTGQSTFDGILRATNILIAGKIVVVAGYGWVGKGIAMRARGLGARRVIV TEVNPIRALEAIYDGFEVMPMSEAAEIGDIFITATGNKAVIRREHFEKMKNGAILANAGHFNVEVWIPDLEELARSKRHV LPYVTEYELRDGRKIYLLAEGRLVNLVAAEGHPSEVMDMSFANQFLASLYLMDNKGKLPLRVMNPPLELDEMVASLKLES MSVRIDSMTREQEEYVKSWRHGT
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine [H]
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family [H]
Homologues:
Organism=Homo sapiens, GI9951915, Length=416, Percent_Identity=48.3173076923077, Blast_Score=372, Evalue=1e-103, Organism=Homo sapiens, GI239937451, Length=390, Percent_Identity=48.974358974359, Blast_Score=355, Evalue=3e-98, Organism=Homo sapiens, GI298286489, Length=420, Percent_Identity=39.2857142857143, Blast_Score=301, Evalue=8e-82, Organism=Homo sapiens, GI195539349, Length=420, Percent_Identity=39.2857142857143, Blast_Score=301, Evalue=1e-81, Organism=Homo sapiens, GI195539337, Length=420, Percent_Identity=39.2857142857143, Blast_Score=300, Evalue=1e-81, Organism=Homo sapiens, GI24308043, Length=420, Percent_Identity=39.2857142857143, Blast_Score=300, Evalue=2e-81, Organism=Homo sapiens, GI21361647, Length=419, Percent_Identity=38.4248210023866, Blast_Score=278, Evalue=5e-75, Organism=Caenorhabditis elegans, GI17506425, Length=418, Percent_Identity=45.4545454545455, Blast_Score=342, Evalue=2e-94, Organism=Saccharomyces cerevisiae, GI6320882, Length=435, Percent_Identity=43.448275862069, Blast_Score=347, Evalue=2e-96, Organism=Drosophila melanogaster, GI24642172, Length=413, Percent_Identity=46.7312348668281, Blast_Score=352, Evalue=2e-97, Organism=Drosophila melanogaster, GI24656245, Length=402, Percent_Identity=39.3034825870647, Blast_Score=285, Evalue=3e-77, Organism=Drosophila melanogaster, GI45553385, Length=413, Percent_Identity=40.9200968523002, Blast_Score=280, Evalue=2e-75, Organism=Drosophila melanogaster, GI45553387, Length=413, Percent_Identity=40.9200968523002, Blast_Score=279, Evalue=2e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 [H]
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD [H]
EC number: =3.3.1.1 [H]
Molecular weight: Translated: 47274; Mature: 47274
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: PS00739 ADOHCYASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVDYMEYKVKDLALAPQGNAKISWAEQNMPVLMLLRKRHSALKPLKGVRVGAVLHVTKE CCCCHHHEEEEHEEECCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEHHH TAVLMKAFVDAGAEVVLAGSNPLSTQDDIAAALVEYGVHVYAWRGQSSSEYYWCLEKIIE HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHH WRPQIVLDDGADLHALIHEKHLDLAEQIIGGTEETTTGVIRLKALEREGLLKYPVIAVNN CCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEECCEEEECC AYTKHMFDNRYGTGQSTFDGILRATNILIAGKIVVVAGYGWVGKGIAMRARGLGARRVIV CHHHHHCCCCCCCCCHHHHHHHHHHHEEEEEEEEEEEECCCCCCCHHHHCCCCCCCEEEE TEVNPIRALEAIYDGFEVMPMSEAAEIGDIFITATGNKAVIRREHFEKMKNGAILANAGH EECCHHHHHHHHHCCCEEEECHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEECCE FNVEVWIPDLEELARSKRHVLPYVTEYELRDGRKIYLLAEGRLVNLVAAEGHPSEVMDMS EEEEEECCCHHHHHHCCCCCCCCEEEEEECCCCEEEEEECCCEEEEEECCCCCHHHHHHH FANQFLASLYLMDNKGKLPLRVMNPPLELDEMVASLKLESMSVRIDSMTREQEEYVKSWR HHHHHHHHEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHC HGT CCC >Mature Secondary Structure MRVDYMEYKVKDLALAPQGNAKISWAEQNMPVLMLLRKRHSALKPLKGVRVGAVLHVTKE CCCCHHHEEEEHEEECCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEHHH TAVLMKAFVDAGAEVVLAGSNPLSTQDDIAAALVEYGVHVYAWRGQSSSEYYWCLEKIIE HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHH WRPQIVLDDGADLHALIHEKHLDLAEQIIGGTEETTTGVIRLKALEREGLLKYPVIAVNN CCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEECCEEEECC AYTKHMFDNRYGTGQSTFDGILRATNILIAGKIVVVAGYGWVGKGIAMRARGLGARRVIV CHHHHHCCCCCCCCCHHHHHHHHHHHEEEEEEEEEEEECCCCCCCHHHHCCCCCCCEEEE TEVNPIRALEAIYDGFEVMPMSEAAEIGDIFITATGNKAVIRREHFEKMKNGAILANAGH EECCHHHHHHHHHCCCEEEECHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEECCE FNVEVWIPDLEELARSKRHVLPYVTEYELRDGRKIYLLAEGRLVNLVAAEGHPSEVMDMS EEEEEECCCHHHHHHCCCCCCCCEEEEEECCCCEEEEEECCCEEEEEECCCCCHHHHHHH FANQFLASLYLMDNKGKLPLRVMNPPLELDEMVASLKLESMSVRIDSMTREQEEYVKSWR HHHHHHHHEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHC HGT CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11572479 [H]