Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884553

Identifier: 218884553

GI number: 218884553

Start: 1163284

End: 1163592

Strand: Direct

Name: 218884553

Synonym: DKAM_1242

Alternate gene names: NA

Gene position: 1163284-1163592 (Clockwise)

Preceding gene: 218884552

Following gene: 218884554

Centisome position: 85.21

GC content: 43.37

Gene sequence:

>309_bases
ATGATGAGTGTTTCAGATTTTATACGTATAAGAGAGGTTAATGTGGAGGGTAAGAAGTTAATCGGGATCGAGATCTCGCT
TCCAAATAGTCCACCTGCAGTTATTCTAATAGGTGAAAAAGGCTTTGCCATGTGTGGGCTTCTCGATATACAGGCAGCTG
AGAGACTCGGCGTGGTTGCTGTGAAAGTCCAGGGTGTTAGAACAGTCGAGGACATGCTGGCTAAAGAAATAAGCGATTCA
ACAAGTAAGGCCAGAGAACACGGGCTTGTTAAGGGGGTTAAACTAATAGATGTAATTAACAAGCTGTAG

Upstream 100 bases:

>100_bases
GCTGGGATCGGGCACCGCTTCCTATATTCATATATTCTTAACGAGCCAGCATATTTAAGAAACCCCAGTATATAAAGAGT
CTCGTGGCATGCTGGGGGTT

Downstream 100 bases:

>100_bases
GTGCCTCGTGTTGGGTAGGGTGAAAATAATAGCGACCCTTGGACCCAGTATTCGTGATTACAATGTAATTAAGAAAATGA
TCAAGGAGGGTGTAGCCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MMSVSDFIRIREVNVEGKKLIGIEISLPNSPPAVILIGEKGFAMCGLLDIQAAERLGVVAVKVQGVRTVEDMLAKEISDS
TSKAREHGLVKGVKLIDVINKL

Sequences:

>Translated_102_residues
MMSVSDFIRIREVNVEGKKLIGIEISLPNSPPAVILIGEKGFAMCGLLDIQAAERLGVVAVKVQGVRTVEDMLAKEISDS
TSKAREHGLVKGVKLIDVINKL
>Mature_102_residues
MMSVSDFIRIREVNVEGKKLIGIEISLPNSPPAVILIGEKGFAMCGLLDIQAAERLGVVAVKVQGVRTVEDMLAKEISDS
TSKAREHGLVKGVKLIDVINKL

Specific function: Unknown

COG id: COG3377

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10998; Mature: 10998

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSVSDFIRIREVNVEGKKLIGIEISLPNSPPAVILIGEKGFAMCGLLDIQAAERLGVVA
CCCHHHCEEEEEECCCCCEEEEEEEECCCCCCEEEEECCCCCEEEEEEECCHHHCCCEEE
VKVQGVRTVEDMLAKEISDSTSKAREHGLVKGVKLIDVINKL
EEECCCHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MMSVSDFIRIREVNVEGKKLIGIEISLPNSPPAVILIGEKGFAMCGLLDIQAAERLGVVA
CCCHHHCEEEEEECCCCCEEEEEEEECCCCCCEEEEECCCCCEEEEEEECCHHHCCCEEE
VKVQGVRTVEDMLAKEISDSTSKAREHGLVKGVKLIDVINKL
EEECCCHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA