| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884535
Identifier: 218884535
GI number: 218884535
Start: 1145561
End: 1146061
Strand: Direct
Name: 218884535
Synonym: DKAM_1224
Alternate gene names: NA
Gene position: 1145561-1146061 (Clockwise)
Preceding gene: 218884532
Following gene: 218884539
Centisome position: 83.91
GC content: 45.31
Gene sequence:
>501_bases ATGAACACTGTAGCCACGGTACTAGTAGATGTTACCTGTGAAATCGGAAGGGTTACAAAGCTGGAGAAGCACTTTAGAAG TAGGGGGTTTGTAACAACTATTCTAACCCCGGACTCAGTGAGGGCTGTTTACAGGTTTAAACTAGAGGAAGCTGATGATT CAGTGAAGAATATTATATCAGCCTTAAACGAGGCTACCCCATTATTTAAAACAATATGTGTAGAAGTATGGGCTATCCTA CCAGTGCAGAATATGGTTGCTAGACCCCCGGTTATAGAGGTTGGCGACGGGCTTATATACGTGATGAGGAGGGGGAACAG GGTGCTCGCCAAAGTGGTATGGGACAGGATAAACCCTGCGACATGGATGCTACCTGGTAGTGCTTTAAGGAATTGTCTAC CAGGCACAGAGGTTTATAGGCTGGAGACCGAGTTAAGTAGGAAAATATCCCTGCTCAAATACGTTTCAGCTAATGTGAAA ACGAGCCCCGGCAATGGTTAA
Upstream 100 bases:
>100_bases CCCGTGTTGAATCTATACTATAATAGTGATGAGTAATCTAGCCCTGAAGCAGTGAAGAAGTTGTCCCCGGCTGATCCATA ACTTTGAGAAAGGTGGTCTA
Downstream 100 bases:
>100_bases GGATGGTTAACAATTAGCTGTACACTGGATCAGACAGGGTTCGTTAATGCTCATCCCGTTTAAACGGTCGCCCGGATAGG GCGTTCATCATGTTTTCATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MNTVATVLVDVTCEIGRVTKLEKHFRSRGFVTTILTPDSVRAVYRFKLEEADDSVKNIISALNEATPLFKTICVEVWAIL PVQNMVARPPVIEVGDGLIYVMRRGNRVLAKVVWDRINPATWMLPGSALRNCLPGTEVYRLETELSRKISLLKYVSANVK TSPGNG
Sequences:
>Translated_166_residues MNTVATVLVDVTCEIGRVTKLEKHFRSRGFVTTILTPDSVRAVYRFKLEEADDSVKNIISALNEATPLFKTICVEVWAIL PVQNMVARPPVIEVGDGLIYVMRRGNRVLAKVVWDRINPATWMLPGSALRNCLPGTEVYRLETELSRKISLLKYVSANVK TSPGNG >Mature_166_residues MNTVATVLVDVTCEIGRVTKLEKHFRSRGFVTTILTPDSVRAVYRFKLEEADDSVKNIISALNEATPLFKTICVEVWAIL PVQNMVARPPVIEVGDGLIYVMRRGNRVLAKVVWDRINPATWMLPGSALRNCLPGTEVYRLETELSRKISLLKYVSANVK TSPGNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18501; Mature: 18501
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTVATVLVDVTCEIGRVTKLEKHFRSRGFVTTILTPDSVRAVYRFKLEEADDSVKNIIS CCHHHEEHHHHHHCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCHHHHHHHH ALNEATPLFKTICVEVWAILPVQNMVARPPVIEVGDGLIYVMRRGNRVLAKVVWDRINPA HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCHHHHHHHHHHCCCC TWMLPGSALRNCLPGTEVYRLETELSRKISLLKYVSANVKTSPGNG EEECCHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MNTVATVLVDVTCEIGRVTKLEKHFRSRGFVTTILTPDSVRAVYRFKLEEADDSVKNIIS CCHHHEEHHHHHHCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCHHHHHHHH ALNEATPLFKTICVEVWAILPVQNMVARPPVIEVGDGLIYVMRRGNRVLAKVVWDRINPA HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCHHHHHHHHHHCCCC TWMLPGSALRNCLPGTEVYRLETELSRKISLLKYVSANVKTSPGNG EEECCHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA