Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884535

Identifier: 218884535

GI number: 218884535

Start: 1145561

End: 1146061

Strand: Direct

Name: 218884535

Synonym: DKAM_1224

Alternate gene names: NA

Gene position: 1145561-1146061 (Clockwise)

Preceding gene: 218884532

Following gene: 218884539

Centisome position: 83.91

GC content: 45.31

Gene sequence:

>501_bases
ATGAACACTGTAGCCACGGTACTAGTAGATGTTACCTGTGAAATCGGAAGGGTTACAAAGCTGGAGAAGCACTTTAGAAG
TAGGGGGTTTGTAACAACTATTCTAACCCCGGACTCAGTGAGGGCTGTTTACAGGTTTAAACTAGAGGAAGCTGATGATT
CAGTGAAGAATATTATATCAGCCTTAAACGAGGCTACCCCATTATTTAAAACAATATGTGTAGAAGTATGGGCTATCCTA
CCAGTGCAGAATATGGTTGCTAGACCCCCGGTTATAGAGGTTGGCGACGGGCTTATATACGTGATGAGGAGGGGGAACAG
GGTGCTCGCCAAAGTGGTATGGGACAGGATAAACCCTGCGACATGGATGCTACCTGGTAGTGCTTTAAGGAATTGTCTAC
CAGGCACAGAGGTTTATAGGCTGGAGACCGAGTTAAGTAGGAAAATATCCCTGCTCAAATACGTTTCAGCTAATGTGAAA
ACGAGCCCCGGCAATGGTTAA

Upstream 100 bases:

>100_bases
CCCGTGTTGAATCTATACTATAATAGTGATGAGTAATCTAGCCCTGAAGCAGTGAAGAAGTTGTCCCCGGCTGATCCATA
ACTTTGAGAAAGGTGGTCTA

Downstream 100 bases:

>100_bases
GGATGGTTAACAATTAGCTGTACACTGGATCAGACAGGGTTCGTTAATGCTCATCCCGTTTAAACGGTCGCCCGGATAGG
GCGTTCATCATGTTTTCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MNTVATVLVDVTCEIGRVTKLEKHFRSRGFVTTILTPDSVRAVYRFKLEEADDSVKNIISALNEATPLFKTICVEVWAIL
PVQNMVARPPVIEVGDGLIYVMRRGNRVLAKVVWDRINPATWMLPGSALRNCLPGTEVYRLETELSRKISLLKYVSANVK
TSPGNG

Sequences:

>Translated_166_residues
MNTVATVLVDVTCEIGRVTKLEKHFRSRGFVTTILTPDSVRAVYRFKLEEADDSVKNIISALNEATPLFKTICVEVWAIL
PVQNMVARPPVIEVGDGLIYVMRRGNRVLAKVVWDRINPATWMLPGSALRNCLPGTEVYRLETELSRKISLLKYVSANVK
TSPGNG
>Mature_166_residues
MNTVATVLVDVTCEIGRVTKLEKHFRSRGFVTTILTPDSVRAVYRFKLEEADDSVKNIISALNEATPLFKTICVEVWAIL
PVQNMVARPPVIEVGDGLIYVMRRGNRVLAKVVWDRINPATWMLPGSALRNCLPGTEVYRLETELSRKISLLKYVSANVK
TSPGNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18501; Mature: 18501

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTVATVLVDVTCEIGRVTKLEKHFRSRGFVTTILTPDSVRAVYRFKLEEADDSVKNIIS
CCHHHEEHHHHHHCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCHHHHHHHH
ALNEATPLFKTICVEVWAILPVQNMVARPPVIEVGDGLIYVMRRGNRVLAKVVWDRINPA
HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCHHHHHHHHHHCCCC
TWMLPGSALRNCLPGTEVYRLETELSRKISLLKYVSANVKTSPGNG
EEECCHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNTVATVLVDVTCEIGRVTKLEKHFRSRGFVTTILTPDSVRAVYRFKLEEADDSVKNIIS
CCHHHEEHHHHHHCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCHHHHHHHH
ALNEATPLFKTICVEVWAILPVQNMVARPPVIEVGDGLIYVMRRGNRVLAKVVWDRINPA
HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCHHHHHHHHHHCCCC
TWMLPGSALRNCLPGTEVYRLETELSRKISLLKYVSANVKTSPGNG
EEECCHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA