Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884506

Identifier: 218884506

GI number: 218884506

Start: 1113069

End: 1113350

Strand: Direct

Name: 218884506

Synonym: DKAM_1195

Alternate gene names: NA

Gene position: 1113069-1113350 (Clockwise)

Preceding gene: 218884505

Following gene: 218884511

Centisome position: 81.53

GC content: 62.06

Gene sequence:

>282_bases
GTGAAGCTCGTGTTCTACAAGCCGTGTCACACCATCTCCCTTCTCGCGGTCAAGGTAGAGGTATACGAGGCCGGTGACCG
GGGTTTGCCCGAGGTCCTTGCTGCGCTCTTCCCGGTGACGGAGTTCCCCCCCACCGTGCAGGGACCTACTCCCGGCAACC
CCACTAGCTCCCCCTACGACTCGGGTATCCTGCCCCCGTACTCCTCCACGATAACAGACGCGAGCTCCTTCAACTGCTTG
GCTCTCACCCTGTACAGCCCGAGGGGTCTAAGGGCCTTCTGA

Upstream 100 bases:

>100_bases
ACGGGCCCCTGGATAAAAATTACTTTATGGAAGGGTATTTAATACTATGTCACTCAACCATTCCTTACTTTCTGGATGAC
TGGGCTCGTAGGCGGGGGAG

Downstream 100 bases:

>100_bases
ACCTCCTCCGGGGTGCTCTTTACAACGACTCCACGTCCGTGAACCTCTCAACGAGGGCTTGGAAGACCCTGGACGCTGCT
GCTCGAGTGGTCCTCCTGAG

Product: putative EndoIII-related endonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MKLVFYKPCHTISLLAVKVEVYEAGDRGLPEVLAALFPVTEFPPTVQGPTPGNPTSSPYDSGILPPYSSTITDASSFNCL
ALTLYSPRGLRAF

Sequences:

>Translated_93_residues
MKLVFYKPCHTISLLAVKVEVYEAGDRGLPEVLAALFPVTEFPPTVQGPTPGNPTSSPYDSGILPPYSSTITDASSFNCL
ALTLYSPRGLRAF
>Mature_93_residues
MKLVFYKPCHTISLLAVKVEVYEAGDRGLPEVLAALFPVTEFPPTVQGPTPGNPTSSPYDSGILPPYSSTITDASSFNCL
ALTLYSPRGLRAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9992; Mature: 9992

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVFYKPCHTISLLAVKVEVYEAGDRGLPEVLAALFPVTEFPPTVQGPTPGNPTSSPYD
CCEEEECCCCCEEEEEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
SGILPPYSSTITDASSFNCLALTLYSPRGLRAF
CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC
>Mature Secondary Structure
MKLVFYKPCHTISLLAVKVEVYEAGDRGLPEVLAALFPVTEFPPTVQGPTPGNPTSSPYD
CCEEEECCCCCEEEEEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
SGILPPYSSTITDASSFNCLALTLYSPRGLRAF
CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA