| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884454
Identifier: 218884454
GI number: 218884454
Start: 1074687
End: 1075577
Strand: Direct
Name: 218884454
Synonym: DKAM_1143
Alternate gene names: NA
Gene position: 1074687-1075577 (Clockwise)
Preceding gene: 218884453
Following gene: 218884458
Centisome position: 78.72
GC content: 46.02
Gene sequence:
>891_bases ATGGAGTACACCGAGAAGATAGTCGAGGGGTACAGGCTTAGAATCTACATTGTCAACAAGCTATTGATCGGTATACCATT GGACATAGGTCCCAGGATACTATATATCGCCCCCCTTGAGAAGCCCGAGTTCAATTTATTCAGTATAATACCAGATATCA GTATTGAAACGCCCGAGGGCACCTGGAAAATACATGGGGGACATAGGCTCTGGACATCGCCTGAAGCCATGCCGCGTTCC TACTCACTTGACGATAAACCAGTTGAATTAAGGATTGGGAGAGATGAGATCGAGATCGTCGGCAACCCGGAGCGTGCTAA CAATGTTTTAAAGAAGATACGTGTTACACCGGGTGAAGAAGACTACTCGGTGAAAGTAGTCCATGAAATAATCAATATAG GTAGATGGCCACTGGAGTTCTCATGCTGGGCTATCTCAGTTATGAGGAGTAATGGATTCGCTATAATACCATTTAAGCCG AGGCAGGTGGATCACCACGGCCTACTCCCAGATAGATTCATTGTGGCATGGCCGTACACTAGGCTAGATGACCCGAGGAT TAAGCTTAGAGGCAGCTACATCATAGTACATCAAGATCCAGGTGTTAAAAACCCGGTTAAAATAGGTGCTAGAGCCAATC CCTCATGGATCGCGTACTGGGTGGAGGAATACTTGTTCAAGAAGTCTTTCAGAGAAGAAGACGCTGTATACCCCGACTTC GGCTCGAGTGTAGAAGTATACACTAATGATAGATTCCTGGAGTTAGAGACCCTTGGCCCCTTAAGGAGAGTAGAACCAGG GAGATCAAACATCCATGTTGAGACATGGAGTGTGAAAAGAATTGGGGGTCTGAGACCCCATGAAAAAATATTGGAGGAGA AACTAGGGTAG
Upstream 100 bases:
>100_bases AAGTAGTCATCGAGTCTATAATAAGTGAGGACACAACCGGGCAAAATAACCCTAGATATAGATATTAGAGTAATAAGATG TGTCCCGGAGGGACGTGTCA
Downstream 100 bases:
>100_bases ACTTAACGCGTATTGGACTGCGCTGTACGCATCCACTAGTCCATACCCGGTGTAAACGTCGAAGCCTGAAGAACCTAGAT CATATGCTGTAGATGTCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MEYTEKIVEGYRLRIYIVNKLLIGIPLDIGPRILYIAPLEKPEFNLFSIIPDISIETPEGTWKIHGGHRLWTSPEAMPRS YSLDDKPVELRIGRDEIEIVGNPERANNVLKKIRVTPGEEDYSVKVVHEIINIGRWPLEFSCWAISVMRSNGFAIIPFKP RQVDHHGLLPDRFIVAWPYTRLDDPRIKLRGSYIIVHQDPGVKNPVKIGARANPSWIAYWVEEYLFKKSFREEDAVYPDF GSSVEVYTNDRFLELETLGPLRRVEPGRSNIHVETWSVKRIGGLRPHEKILEEKLG
Sequences:
>Translated_296_residues MEYTEKIVEGYRLRIYIVNKLLIGIPLDIGPRILYIAPLEKPEFNLFSIIPDISIETPEGTWKIHGGHRLWTSPEAMPRS YSLDDKPVELRIGRDEIEIVGNPERANNVLKKIRVTPGEEDYSVKVVHEIINIGRWPLEFSCWAISVMRSNGFAIIPFKP RQVDHHGLLPDRFIVAWPYTRLDDPRIKLRGSYIIVHQDPGVKNPVKIGARANPSWIAYWVEEYLFKKSFREEDAVYPDF GSSVEVYTNDRFLELETLGPLRRVEPGRSNIHVETWSVKRIGGLRPHEKILEEKLG >Mature_296_residues MEYTEKIVEGYRLRIYIVNKLLIGIPLDIGPRILYIAPLEKPEFNLFSIIPDISIETPEGTWKIHGGHRLWTSPEAMPRS YSLDDKPVELRIGRDEIEIVGNPERANNVLKKIRVTPGEEDYSVKVVHEIINIGRWPLEFSCWAISVMRSNGFAIIPFKP RQVDHHGLLPDRFIVAWPYTRLDDPRIKLRGSYIIVHQDPGVKNPVKIGARANPSWIAYWVEEYLFKKSFREEDAVYPDF GSSVEVYTNDRFLELETLGPLRRVEPGRSNIHVETWSVKRIGGLRPHEKILEEKLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34258; Mature: 34258
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYTEKIVEGYRLRIYIVNKLLIGIPLDIGPRILYIAPLEKPEFNLFSIIPDISIETPEG CCHHHHHHCCEEEEEEEEEEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCEEECCCC TWKIHGGHRLWTSPEAMPRSYSLDDKPVELRIGRDEIEIVGNPERANNVLKKIRVTPGEE EEEEECCEEEECCCCCCCCCCCCCCCCEEEEECCCEEEEECCCHHHHHHHHHEECCCCCC DYSVKVVHEIINIGRWPLEFSCWAISVMRSNGFAIIPFKPRQVDHHGLLPDRFIVAWPYT CCCHHHHHHHHHCCCCCEEEEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEECCC RLDDPRIKLRGSYIIVHQDPGVKNPVKIGARANPSWIAYWVEEYLFKKSFREEDAVYPDF CCCCCEEEEECCEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC GSSVEVYTNDRFLELETLGPLRRVEPGRSNIHVETWSVKRIGGLRPHEKILEEKLG CCEEEEEECCEEEEEECCCCHHHCCCCCCEEEEEEEEEHHCCCCCHHHHHHHHHCC >Mature Secondary Structure MEYTEKIVEGYRLRIYIVNKLLIGIPLDIGPRILYIAPLEKPEFNLFSIIPDISIETPEG CCHHHHHHCCEEEEEEEEEEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCEEECCCC TWKIHGGHRLWTSPEAMPRSYSLDDKPVELRIGRDEIEIVGNPERANNVLKKIRVTPGEE EEEEECCEEEECCCCCCCCCCCCCCCCEEEEECCCEEEEECCCHHHHHHHHHEECCCCCC DYSVKVVHEIINIGRWPLEFSCWAISVMRSNGFAIIPFKPRQVDHHGLLPDRFIVAWPYT CCCHHHHHHHHHCCCCCEEEEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEECCC RLDDPRIKLRGSYIIVHQDPGVKNPVKIGARANPSWIAYWVEEYLFKKSFREEDAVYPDF CCCCCEEEEECCEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC GSSVEVYTNDRFLELETLGPLRRVEPGRSNIHVETWSVKRIGGLRPHEKILEEKLG CCEEEEEECCEEEEEECCCCHHHCCCCCCEEEEEEEEEHHCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA